Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR022953
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 31 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.901s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0258989.1
n.a. 6-phosphofructokinase [Medicago truncatula] gi|357517251|ref|XP_003628914.1| chr0 134519816 134530578 -
2 domain predictions
3 GO terms
Lj1g3v2095500.1
n.a. PREDICTED: 6-phosphofructokinase 3-like [Glycine max] gi|356515641|ref|XP_003526507.1| chr1 24768709 24774211 +
2 domain predictions
3 GO terms
Lj2g3v0077670.1
n.a. PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like isoform X1 [Cicer arietinum] gi|502123626|ref|XP_004498195.1| chr2 1547641 1553642 -
2 domain predictions
3 GO terms
Lj2g3v0894380.2
n.a. PREDICTED: 6-phosphofructokinase 3-like [Cicer arietinum] gi|502164183|ref|XP_004513074.1| chr2 13666620 13670816 +
2 domain predictions
3 GO terms
Lj2g3v0894380.3
n.a. PREDICTED: 6-phosphofructokinase 3-like [Cicer arietinum] gi|502164183|ref|XP_004513074.1| chr2 13667578 13670816 +
2 domain predictions
3 GO terms
Lj2g3v1453880.1
n.a. PREDICTED: 6-phosphofructokinase 5, chloroplastic-like [Cicer arietinum] gi|502092757|ref|XP_004489766.1| chr2 22848375 22853941 +
2 domain predictions
3 GO terms
Lj3g3v0290220.1
n.a. PREDICTED: 6-phosphofructokinase 3-like [Glycine max] gi|356556577|ref|XP_003546601.1| chr3 1903864 1905921 +
2 domain predictions
3 GO terms
Lj3g3v0290220.2
n.a. PREDICTED: 6-phosphofructokinase 3-like [Glycine max] gi|356550484|ref|XP_003543617.1| chr3 1903864 1908829 +
2 domain predictions
3 GO terms
Lj4g3v0095120.1
n.a. PREDICTED: 6-phosphofructokinase 2-like [Cicer arietinum] gi|502126527|ref|XP_004499341.1| chr4 780000 782101 +
2 domain predictions
3 GO terms
Lj4g3v0133530.1
n.a. Pyrophosphate-fructose 6-phosphate 1-phosphotransferase subunit beta [Medicago truncatula] gi|357480393|ref|XP_003610482.1| chr4 1384024 1391438 +
2 domain predictions
3 GO terms
Lj4g3v3031650.1
n.a. PREDICTED: 6-phosphofructokinase 3-like [Cicer arietinum] gi|502138727|ref|XP_004503509.1| chr4 40587654 40590257 -
2 domain predictions
3 GO terms
Lj6g3v1791950.1
n.a. PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [Glycine max] gi|356532285|ref|XP_003534704.1| chr6 20087796 20093052 +
2 domain predictions
3 GO terms
LotjaGi1g1v0409800.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|A0A151TST4|A0A151TST4_CAJCA ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi1g1v0409800 LjG1.1_chr1 90025072 90031642 +
2 domain predictions
3 GO terms
LotjaGi2g1v0227800.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|V7C472|V7C472_PHAVU ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0227800 LjG1.1_chr2 68551565 68558597 +
2 domain predictions
3 GO terms
LotjaGi2g1v0227800.2
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|V7C472|V7C472_PHAVU ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0227800 LjG1.1_chr2 68552724 68558728 +
2 domain predictions
3 GO terms
LotjaGi2g1v0227800.3
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|V7C472|V7C472_PHAVU ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0227800 LjG1.1_chr2 68554425 68558116 +
2 domain predictions
3 GO terms
LotjaGi2g1v0326200.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT2G22480.1 phosphofructokinase 5; Swiss-Prot: sp|Q8VYN6|PFKA5_ARATH ATP-dependent 6-phosphofructokinase 5, chloroplastic; TrEMBL-Plants: tr|I1J525|I1J525_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0326200 LjG1.1_chr2 80154876 80160539 +
2 domain predictions
3 GO terms
LotjaGi2g1v0326200.2
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT2G22480.1 phosphofructokinase 5; Swiss-Prot: sp|Q8VYN6|PFKA5_ARATH ATP-dependent 6-phosphofructokinase 5, chloroplastic; TrEMBL-Plants: tr|I1J525|I1J525_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0326200 LjG1.1_chr2 80155009 80160013 +
2 domain predictions
3 GO terms
LotjaGi3g1v0022100.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|I1M5F6|I1M5F6_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi3g1v0022100 LjG1.1_chr3 2393528 2402115 +
2 domain predictions
3 GO terms
LotjaGi3g1v0022100.2
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|I1MCW0|I1MCW0_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi3g1v0022100 LjG1.1_chr3 2393590 2399438 +
2 domain predictions
3 GO terms
LotjaGi4g1v0004400.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT5G47810.1 phosphofructokinase 2; Swiss-Prot: sp|Q9FIK0|PFKA2_ARATH ATP-dependent 6-phosphofructokinase 2; TrEMBL-Plants: tr|V7CAY4|V7CAY4_PHAVU ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi4g1v0004400 LjG1.1_chr4 745484 752042 +
2 domain predictions
3 GO terms
LotjaGi4g1v0004400.2
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT5G47810.1 phosphofructokinase 2; Swiss-Prot: sp|Q9FIK0|PFKA2_ARATH ATP-dependent 6-phosphofructokinase 2; TrEMBL-Plants: tr|G7ZZU2|G7ZZU2_MEDTR ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi4g1v0004400 LjG1.1_chr4 746617 747411 +
2 domain predictions
3 GO terms
LotjaGi4g1v0010600.1
n.a. Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|A0A151SU15|A0A151SU15_CAJCA Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi4g1v0010600 LjG1.1_chr4 1345363 1355120 +
2 domain predictions
3 GO terms
LotjaGi4g1v0010600.2
n.a. Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|A0A151SU15|A0A151SU15_CAJCA Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi4g1v0010600 LjG1.1_chr4 1345436 1353393 +
2 domain predictions
3 GO terms
LotjaGi4g1v0010600.3
n.a. Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|A0A151SU15|A0A151SU15_CAJCA Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi4g1v0010600 LjG1.1_chr4 1345477 1350849 +
2 domain predictions
3 GO terms
LotjaGi4g1v0160800.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT2G22480.1 phosphofructokinase 5; Swiss-Prot: sp|Q8VYN6|PFKA5_ARATH ATP-dependent 6-phosphofructokinase 5, chloroplastic; TrEMBL-Plants: tr|G7LJ94|G7LJ94_MEDTR ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi4g1v0160800 LjG1.1_chr4 28655619 28666614 -
2 domain predictions
3 GO terms
LotjaGi4g1v0443300.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|G7L7C4|G7L7C4_MEDTR ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi4g1v0443300 LjG1.1_chr4 81675994 81681343 -
2 domain predictions
3 GO terms
LotjaGi5g1v0257100.1
n.a. ATP-dependent 6-phosphofructokinase; TAIR: AT5G61580.1 phosphofructokinase 4; Swiss-Prot: sp|Q9FKG3|PFKA4_ARATH ATP-dependent 6-phosphofructokinase 4, chloroplastic; TrEMBL-Plants: tr|I1LCJ1|I1LCJ1_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi5g1v0257100 LjG1.1_chr5 56592013 56601901 +
2 domain predictions
3 GO terms
LotjaGi6g1v0289400.1
n.a. Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|I1KZW7|I1KZW7_SOYBN Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi6g1v0289400 LjG1.1_chr6 60663240 60669004 +
2 domain predictions
3 GO terms
LotjaGi6g1v0289400.2
n.a. Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|I1KZW7|I1KZW7_SOYBN Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi6g1v0289400 LjG1.1_chr6 60663556 60668032 +
2 domain predictions
3 GO terms
LotjaGi6g1v0289400.3
n.a. Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q8W4M5|PFPB1_ARATH Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1; TrEMBL-Plants: tr|I1KZW7|I1KZW7_SOYBN Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi6g1v0289400 LjG1.1_chr6 60663564 60668464 +
2 domain predictions
3 GO terms