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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023213
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 212 results. Now displaying 1 of 5 with 50 rows per page. This search has taken 5.745s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0036889.1
n.a. PREDICTED: benzyl alcohol O-benzoyltransferase-like [Glycine max] gi|356495272|ref|XP_003516503.1| chr0 11857863 11858324 +
2 domain predictions
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Lj0g3v0036899.1
n.a. PREDICTED: benzyl alcohol O-benzoyltransferase-like [Glycine max] gi|356495272|ref|XP_003516503.1| chr0 11861483 11862342 +
2 domain predictions
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Lj0g3v0064629.1
n.a. PREDICTED: LOW QUALITY PROTEIN: salutaridinol 7-O-acetyltransferase-like [Glycine max] gi|356522592|ref|XP_003529930.1| chr0 22391764 22394723 +
2 domain predictions
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Lj0g3v0067939.1
n.a. PREDICTED: vinorine synthase-like [Cicer arietinum] gi|502118535|ref|XP_004496315.1| chr0 24208185 24208670 +
2 domain predictions
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Lj0g3v0068139.1
n.a. PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like [Glycine max] gi|356519220|ref|XP_003528271.1| chr0 24353909 24355327 +
2 domain predictions
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Lj0g3v0074289.1
n.a. PREDICTED: benzyl alcohol O-benzoyltransferase-like [Glycine max] gi|356500043|ref|XP_003518844.1| chr0 27959379 27961599 -
2 domain predictions
 –
Lj0g3v0083559.1
n.a. N-hydroxycinnamoyl/benzoyltransferase 5 [Glycine max] gi|83853814|gb|ABC47847.1| chr0 33153469 33154791 +
2 domain predictions
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Lj0g3v0085979.1
n.a. PREDICTED: BAHD acyltransferase DCR-like [Glycine max] gi|356569319|ref|XP_003552850.1| chr0 34588726 34589496 -
2 domain predictions
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Lj0g3v0085989.1
n.a. PREDICTED: BAHD acyltransferase DCR-like [Glycine max] gi|356569319|ref|XP_003552850.1| chr0 34589704 34589998 -
2 domain predictions
 –
Lj0g3v0105869.1
n.a. shikimate O-hydroxycinnamoyltransferase [Trifolium pratense] gi|206730709|gb|ACI16630.1| chr0 45542471 45547823 +
2 domain predictions
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Lj0g3v0105879.1
n.a. n.a. chr0 45542471 45550291 -
2 domain predictions
 –
Lj0g3v0105999.1
n.a. PREDICTED: vinorine synthase-like [Cicer arietinum] gi|502118535|ref|XP_004496315.1| chr0 45643261 45644604 +
2 domain predictions
 –
Lj0g3v0106009.1
n.a. PREDICTED: vinorine synthase-like [Cicer arietinum] gi|502118535|ref|XP_004496315.1| chr0 45647408 45647893 +
2 domain predictions
 –
Lj0g3v0122599.1
n.a. N-hydroxycinnamoyl/benzoyltransferase [Medicago truncatula] gi|357465575|ref|XP_003603072.1| chr0 54753120 54754482 +
2 domain predictions
 –
Lj0g3v0129489.1
n.a. Anthranilate N-hydroxycinnamoyl/benzoyltransferase [Medicago truncatula] gi|357518587|ref|XP_003629582.1| chr0 58607078 58608183 +
2 domain predictions
 –
Lj0g3v0189009.1
n.a. PREDICTED: benzyl alcohol O-benzoyltransferase-like [Glycine max] gi|356500043|ref|XP_003518844.1| chr0 92410403 92412218 -
2 domain predictions
 –
Lj0g3v0201439.1
n.a. PREDICTED: hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase-like [Glycine max] gi|356574210|ref|XP_003555244.1| chr0 99594016 99595603 -
2 domain predictions
 –
Lj0g3v0204519.1
n.a. Anthranilate N-benzoyltransferase protein [Medicago truncatula] gi|357457513|ref|XP_003599037.1| chr0 101536012 101538291 +
2 domain predictions
 –
Lj0g3v0217099.1
n.a. PREDICTED: phenolic glucoside malonyltransferase 1-like [Cicer arietinum] gi|502126840|ref|XP_004499461.1| chr0 110446056 110447427 +
2 domain predictions
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Lj0g3v0217119.1
n.a. PREDICTED: agmatine coumaroyltransferase-like [Glycine max] gi|356568764|ref|XP_003552580.1| chr0 110446436 110455810 +
2 domain predictions
 –
Lj0g3v0248079.1
n.a. PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like [Glycine max] gi|356571583|ref|XP_003553956.1| chr0 128601468 128603898 +
2 domain predictions
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Lj0g3v0254059.1
n.a. acyltransferase [Lupinus angustifolius] gi|315468031|dbj|BAJ49867.1| chr0 131857579 131859289 -
2 domain predictions
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Lj0g3v0264509.1
n.a. N-hydroxycinnamoyl/benzoyltransferase 5 [Glycine max] gi|83853814|gb|ABC47847.1| chr0 137130376 137131572 -
2 domain predictions
 –
Lj0g3v0268589.1
n.a. PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like [Cicer arietinum] gi|502106999|ref|XP_004493124.1| chr0 139055453 139059453 +
2 domain predictions
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Lj0g3v0269129.1
n.a. PREDICTED: vinorine synthase-like [Cicer arietinum] gi|502118535|ref|XP_004496315.1| chr0 139443076 139444419 +
2 domain predictions
 –
Lj0g3v0269139.1
n.a. PREDICTED: vinorine synthase-like [Cicer arietinum] gi|502118535|ref|XP_004496315.1| chr0 139446682 139447148 +
2 domain predictions
 –
Lj0g3v0272449.1
n.a. PREDICTED: benzyl alcohol O-benzoyltransferase-like [Glycine max] gi|356500043|ref|XP_003518844.1| chr0 141173503 141174797 +
2 domain predictions
 –
Lj0g3v0274409.1
n.a. Anthranilate N-benzoyltransferase protein [Medicago truncatula] gi|357457513|ref|XP_003599037.1| chr0 142255881 142257508 -
2 domain predictions
 –
Lj0g3v0277259.1
n.a. PREDICTED: vinorine synthase-like [Glycine max] gi|356522140|ref|XP_003529707.1| chr0 143890253 143892555 +
2 domain predictions
 –
Lj0g3v0277469.1
n.a. Anthranilate N-benzoyltransferase protein [Medicago truncatula] gi|357515383|ref|XP_003627980.1| chr0 144002445 144004724 +
2 domain predictions
 –
Lj0g3v0294799.1
n.a. Omega-hydroxypalmitate O-feruloyl transferase [Medicago truncatula] gi|357465231|ref|XP_003602897.1| chr0 153251385 153255260 -
2 domain predictions
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Lj0g3v0296629.1
n.a. PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like [Cicer arietinum] gi|502158545|ref|XP_004511192.1| chr0 154103859 154104176 +
2 domain predictions
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Lj0g3v0296639.1
n.a. PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like [Glycine max] gi|356566341|ref|XP_003551391.1| chr0 154104338 154105718 +
2 domain predictions
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Lj0g3v0302449.1
n.a. PREDICTED: benzyl alcohol O-benzoyltransferase-like [Glycine max] gi|356500043|ref|XP_003518844.1| chr0 157356085 157356831 +
2 domain predictions
 –
Lj0g3v0308229.1
n.a. PREDICTED: agmatine coumaroyltransferase-like [Glycine max] gi|356551028|ref|XP_003543881.1| chr0 160906290 160908133 +
2 domain predictions
 –
Lj0g3v0308239.2
n.a. n.a. chr0 160912917 160917736 -
2 domain predictions
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Lj0g3v0315379.1
n.a. PREDICTED: benzyl alcohol O-benzoyltransferase-like [Glycine max] gi|356500043|ref|XP_003518844.1| chr0 164648045 164649786 -
2 domain predictions
 –
Lj0g3v0319259.1
n.a. Anthranilate N-hydroxycinnamoyl/benzoyltransferase [Medicago truncatula] gi|357518587|ref|XP_003629582.1| chr0 166675083 166679368 +
2 domain predictions
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Lj0g3v0331669.1
n.a. PREDICTED: BAHD acyltransferase DCR-like [Cicer arietinum] gi|502163420|ref|XP_004512834.1| chr0 173492588 173494969 +
2 domain predictions
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Lj0g3v0333909.1
n.a. PREDICTED: hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase-like [Glycine max] gi|356574210|ref|XP_003555244.1| chr0 174756870 174758794 -
2 domain predictions
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Lj0g3v0348259.1
n.a. PREDICTED: spermidine hydroxycinnamoyl transferase-like [Cicer arietinum] gi|502150293|ref|XP_004507883.1| chr0 182778386 182779741 -
2 domain predictions
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Lj0g3v0348269.1
n.a. PREDICTED: spermidine hydroxycinnamoyl transferase-like [Cicer arietinum] gi|502150293|ref|XP_004507883.1| chr0 182781720 182782505 -
2 domain predictions
 –
Lj0g3v0348279.1
n.a. PREDICTED: hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase-like [Glycine max] gi|356564838|ref|XP_003550654.1| chr0 182782540 182783034 -
2 domain predictions
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Lj0g3v0361489.1
n.a. PREDICTED: anthocyanin 5-aromatic acyltransferase-like [Glycine max] gi|356568766|ref|XP_003552581.1| chr0 190419647 190419969 -
2 domain predictions
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Lj0g3v0363569.1
n.a. PREDICTED: benzyl alcohol O-benzoyltransferase-like [Glycine max] gi|356500043|ref|XP_003518844.1| chr0 191784534 191786495 -
2 domain predictions
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Lj1g3v1486250.1
n.a. PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like [Glycine max] gi|356518870|ref|XP_003528100.1| chr1 17762501 17764901 -
2 domain predictions
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Lj1g3v1664450.1
n.a. N-hydroxycinnamoyl/benzoyltransferase [Medicago truncatula] gi|357465559|ref|XP_003603064.1| chr1 19917384 19919404 +
2 domain predictions
 –
Lj1g3v1664460.1
n.a. N-hydroxycinnamoyl/benzoyltransferase [Medicago truncatula] gi|357465575|ref|XP_003603072.1| chr1 19919768 19921162 +
2 domain predictions
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Lj1g3v1666490.1
n.a. N-hydroxycinnamoyl/benzoyltransferase [Medicago truncatula] gi|357465575|ref|XP_003603072.1| chr1 19926487 19928221 +
2 domain predictions
 –
Lj1g3v3023870.1
n.a. PREDICTED: agmatine coumaroyltransferase-like [Glycine max] gi|356568760|ref|XP_003552578.1| chr1 34533131 34535297 -
2 domain predictions
 –