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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023465
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.485s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v0593010.2
n.a. PREDICTED: pseudouridine-5'-monophosphatase-like [Cicer arietinum] gi|502142477|ref|XP_004504977.1| chr2 7999007 8003348 +
2 domain predictions
2 GO terms
Lj3g3v2849040.2
n.a. PREDICTED: pseudouridine-5'-monophosphatase-like [Glycine max] gi|356546960|ref|XP_003541887.1| chr3 35176820 35181322 -
2 domain predictions
2 GO terms
Lj4g3v0445710.1
n.a. PREDICTED: pseudouridine-5'-monophosphatase-like [Glycine max] gi|356521303|ref|XP_003529296.1| chr4 5983275 5985306 +
2 domain predictions
2 GO terms
Lj4g3v0445710.2
n.a. PREDICTED: riboflavin kinase-like [Glycine max] gi|356527927|ref|XP_003532557.1| chr4 5984500 5985306 +
2 domain predictions
2 GO terms
LotjaGi1g1v0764100.1
n.a. Riboflavin kinase; TAIR: AT4G21470.1 riboflavin kinase/FMN hydrolase; Swiss-Prot: sp|Q84MD8|FHYRK_ARATH Bifunctional riboflavin kinase/FMN phosphatase; TrEMBL-Plants: tr|A0A0S3QZS5|A0A0S3QZS5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0764100 LjG1.1_chr1 133684580 133689684 -
3 domain predictions
2 GO terms
LotjaGi1g1v0764100.3
n.a. Riboflavin kinase; TAIR: AT4G21470.1 riboflavin kinase/FMN hydrolase; Swiss-Prot: sp|Q84MD8|FHYRK_ARATH Bifunctional riboflavin kinase/FMN phosphatase; TrEMBL-Plants: tr|A0A0S3QZS5|A0A0S3QZS5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0764100 LjG1.1_chr1 133684905 133689590 -
3 domain predictions
2 GO terms
LotjaGi1g1v0764100.4
n.a. Riboflavin kinase; TAIR: AT4G21470.1 riboflavin kinase/FMN hydrolase; Swiss-Prot: sp|Q84MD8|FHYRK_ARATH Bifunctional riboflavin kinase/FMN phosphatase; TrEMBL-Plants: tr|A0A0S3QZS5|A0A0S3QZS5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0764100 LjG1.1_chr1 133685163 133686208 -
3 domain predictions
2 GO terms
LotjaGi4g1v0049600.1
n.a. Riboflavin kinase; TAIR: AT4G21470.1 riboflavin kinase/FMN hydrolase; Swiss-Prot: sp|Q84MD8|FHYRK_ARATH Bifunctional riboflavin kinase/FMN phosphatase; TrEMBL-Plants: tr|A0A151S8Q7|A0A151S8Q7_CAJCA Riboflavin kinase; Found in the gene: LotjaGi4g1v0049600 LjG1.1_chr4 6039120 6043988 -
3 domain predictions
2 GO terms