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Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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We have found 16 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.535s to perform.

Transcript	Name	Description	Chr	Start	End	Strand	Domain predictions	GO predictions
Lj0g3v0058679.1 View gene View transcript LORE1 v3.0 Genomic sequence Coding sequence mRNA sequence Protein sequence Genome browser Expression Atlas (ExpAt)	n.a.	Ribosomal protein L18ae/LX family protein [Theobroma cacao] gi\|508701244\|gb\|EOX93140.1\|	chr0	19307926	19308363	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0006412 GO:0005840 GO:0003735
Lj0g3v0355929.1 View gene View transcript LORE1 v3.0 Genomic sequence Coding sequence mRNA sequence Protein sequence Genome browser Expression Atlas (ExpAt)	n.a.	PREDICTED: 60S ribosomal protein L18a-like [Cucumis sativus] gi\|449459356\|ref\|XP_004147412.1\|	chr0	187492528	187494600	+	2 domain predictions IPR023573 PF01775	3 GO terms GO:0003735 GO:0006412 GO:0005840
Lj6g3v1932850.1 View gene View transcript LORE1 v3.0 Genomic sequence Coding sequence mRNA sequence Protein sequence Genome browser Expression Atlas (ExpAt)	n.a.	PREDICTED: 60S ribosomal protein L18a-like [Cucumis sativus] gi\|449433696\|ref\|XP_004134633.1\|	chr6	21956934	21958709	+	2 domain predictions IPR023573 PF01775	3 GO terms GO:0005840 GO:0003735 GO:0006412
LotjaGi1g1v0043800.1 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|P51418\|R18A2_ARATH 60S ribosomal protein L18a-2; TrEMBL-Plants: tr\|I3S059\|I3S059_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi1g1v0043800	LjG1.1_chr1	5945547	5947575	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0006412 GO:0005840 GO:0003735
LotjaGi1g1v0043800.2 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|P51418\|R18A2_ARATH 60S ribosomal protein L18a-2; TrEMBL-Plants: tr\|I3S059\|I3S059_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi1g1v0043800	LjG1.1_chr1	5945547	5947687	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0006412 GO:0005840 GO:0003735
LotjaGi1g1v0043800.3 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|P51418\|R18A2_ARATH 60S ribosomal protein L18a-2; TrEMBL-Plants: tr\|I3S059\|I3S059_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi1g1v0043800	LjG1.1_chr1	5945547	5947687	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0003735 GO:0006412 GO:0005840
LotjaGi1g1v0043800.4 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|P51418\|R18A2_ARATH 60S ribosomal protein L18a-2; TrEMBL-Plants: tr\|I3S059\|I3S059_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi1g1v0043800	LjG1.1_chr1	5945547	5947740	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0005840 GO:0003735 GO:0006412
LotjaGi1g1v0043800.5 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|P51418\|R18A2_ARATH 60S ribosomal protein L18a-2; TrEMBL-Plants: tr\|I3S059\|I3S059_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi1g1v0043800	LjG1.1_chr1	5945547	5947787	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0006412 GO:0005840 GO:0003735
LotjaGi6g1v0174600.1 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|Q9ATF5\|RL18A_CASSA 60S ribosomal protein L18a; TrEMBL-Plants: tr\|I3T386\|I3T386_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi6g1v0174600	LjG1.1_chr6	46492343	46495331	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0006412 GO:0005840 GO:0003735
LotjaGi6g1v0174600.2 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|Q9ATF5\|RL18A_CASSA 60S ribosomal protein L18a; TrEMBL-Plants: tr\|I3T386\|I3T386_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi6g1v0174600	LjG1.1_chr6	46492683	46494411	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0003735 GO:0006412 GO:0005840
LotjaGi6g1v0174600.3 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|Q9ATF5\|RL18A_CASSA 60S ribosomal protein L18a; TrEMBL-Plants: tr\|I3T386\|I3T386_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi6g1v0174600	LjG1.1_chr6	46492683	46494486	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0005840 GO:0003735 GO:0006412
LotjaGi6g1v0174600.4 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|Q9ATF5\|RL18A_CASSA 60S ribosomal protein L18a; TrEMBL-Plants: tr\|I3T386\|I3T386_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi6g1v0174600	LjG1.1_chr6	46492683	46494486	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0006412 GO:0005840 GO:0003735
LotjaGi6g1v0308100.1 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|P51418\|R18A2_ARATH 60S ribosomal protein L18a-2; TrEMBL-Plants: tr\|I3SWB6\|I3SWB6_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi6g1v0308100	LjG1.1_chr6	62547183	62550157	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0006412 GO:0005840 GO:0003735
LotjaGi6g1v0308100.2 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|P51418\|R18A2_ARATH 60S ribosomal protein L18a-2; TrEMBL-Plants: tr\|I3SWB6\|I3SWB6_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi6g1v0308100	LjG1.1_chr6	62547987	62549899	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0003735 GO:0006412 GO:0005840
LotjaGi6g1v0308100.3 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|P51418\|R18A2_ARATH 60S ribosomal protein L18a-2; TrEMBL-Plants: tr\|I3SWB6\|I3SWB6_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi6g1v0308100	LjG1.1_chr6	62547987	62549899	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0005840 GO:0003735 GO:0006412
LotjaGi6g1v0308100.4 View gene View transcript Genomic sequence Coding sequence Protein sequence Genome browser	n.a.	60S ribosomal protein L18a; TAIR: AT2G34480.2 Ribosomal protein L18ae/LX family protein; Swiss-Prot: sp\|P51418\|R18A2_ARATH 60S ribosomal protein L18a-2; TrEMBL-Plants: tr\|I3SWB6\|I3SWB6_LOTJA 60S ribosomal protein L18a; Found in the gene: LotjaGi6g1v0308100	LjG1.1_chr6	62547987	62549952	-	2 domain predictions IPR023573 PF01775	3 GO terms GO:0006412 GO:0005840 GO:0003735