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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR029803
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.535s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v1170190.1
n.a. Abscisic acid insensitive [Medicago truncatula] gi|357453061|ref|XP_003596807.1| chr3 15666648 15667837 -
2 domain predictions
4 GO terms
Lj3g3v1170200.1
n.a. PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1-like [Glycine max] gi|356547130|ref|XP_003541970.1| chr3 15667888 15669216 -
2 domain predictions
4 GO terms
Lj5g3v0769560.1
n.a. PREDICTED: cell division protein ftsZ homolog 2-1, chloroplastic-like [Glycine max] gi|356537097|ref|XP_003537067.1| chr5 11243518 11247941 +
2 domain predictions
4 GO terms
LotjaGi1g1v0676400.1
n.a. Protein ABSCISIC ACID-INSENSITIVE 5; TAIR: AT2G36270.1 Basic-leucine zipper (bZIP) transcription factor family protein; Swiss-Prot: sp|Q9SJN0|ABI5_ARATH Protein ABSCISIC ACID-INSENSITIVE 5; TrEMBL-Plants: tr|G7L631|G7L631_MEDTR ABA response element-binding factor; Found in the gene: LotjaGi1g1v0676400 LjG1.1_chr1 124313887 124323461 -
2 domain predictions
4 GO terms
LotjaGi5g1v0095000.1
n.a. Protein ABSCISIC ACID-INSENSITIVE 5; TAIR: AT2G36270.1 Basic-leucine zipper (bZIP) transcription factor family protein; Swiss-Prot: sp|Q9SJN0|ABI5_ARATH Protein ABSCISIC ACID-INSENSITIVE 5; TrEMBL-Plants: tr|I1L9C8|I1L9C8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0095000 LjG1.1_chr5 16850480 16855597 +
2 domain predictions
4 GO terms
LotjaGi5g1v0095000.2
n.a. Protein ABSCISIC ACID-INSENSITIVE 5; TAIR: AT2G36270.1 Basic-leucine zipper (bZIP) transcription factor family protein; Swiss-Prot: sp|Q9SJN0|ABI5_ARATH Protein ABSCISIC ACID-INSENSITIVE 5; TrEMBL-Plants: tr|I1L9C8|I1L9C8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0095000 LjG1.1_chr5 16850504 16855815 +
2 domain predictions
4 GO terms