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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR030071
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.511s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0273249.1
n.a. PREDICTED: actin-related protein 8-like [Glycine max] gi|356559153|ref|XP_003547865.1| chr0 141597691 141599484 -
2 domain predictions
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Lj3g3v1933140.1
n.a. PREDICTED: actin-related protein 8-like [Cicer arietinum] gi|502127404|ref|XP_004499695.1| chr3 24967290 24975698 +
2 domain predictions
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Lj3g3v1933140.2
n.a. PREDICTED: actin-related protein 8-like [Glycine max] gi|356508163|ref|XP_003522829.1| chr3 24967290 24976427 +
2 domain predictions
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Lj3g3v1933140.3
n.a. PREDICTED: actin-related protein 8-like [Glycine max] gi|356508163|ref|XP_003522829.1| chr3 24969662 24976427 +
2 domain predictions
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Lj4g3v1073490.1
n.a. PREDICTED: actin-related protein 8-like [Glycine max] gi|356559153|ref|XP_003547865.1| chr4 15326381 15339203 -
2 domain predictions
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Lj4g3v1073490.2
n.a. PREDICTED: actin-related protein 8-like isoform X2 [Cicer arietinum] gi|502154203|ref|XP_004509619.1| chr4 15326381 15339203 -
2 domain predictions
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Lj5g3v1817300.1
n.a. Actin related protein [Medicago truncatula] gi|357517331|ref|XP_003628954.1| chr5 26151781 26156623 -
2 domain predictions
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LotjaGi3g1v0332100.1
n.a. Actin-related family protein; TAIR: AT5G56180.1 actin-related protein 8; Swiss-Prot: sp|Q9FKT0|ARP8_ARATH Actin-related protein 8; TrEMBL-Plants: tr|I1JVM8|I1JVM8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0332100 LjG1.1_chr3 70129339 70138568 +
2 domain predictions
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LotjaGi4g1v0148300.1
n.a. Actin-related family protein; TAIR: AT5G56180.1 actin-related protein 8; Swiss-Prot: sp|Q9FKT0|ARP8_ARATH Actin-related protein 8; TrEMBL-Plants: tr|I1MMQ7|I1MMQ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0148300 LjG1.1_chr4 24170855 24184241 -
2 domain predictions
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LotjaGi4g1v0148300.2
n.a. Actin-related family protein; TAIR: AT5G56180.1 actin-related protein 8; Swiss-Prot: sp|Q9FKT0|ARP8_ARATH Actin-related protein 8; TrEMBL-Plants: tr|I1MMQ7|I1MMQ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0148300 LjG1.1_chr4 24171536 24184106 -
2 domain predictions
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LotjaGi4g1v0148300.3
n.a. Actin-related family protein; TAIR: AT5G56180.3 actin-related protein 8; Swiss-Prot: sp|Q9FKT0|ARP8_ARATH Actin-related protein 8; TrEMBL-Plants: tr|I1MMQ7|I1MMQ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0148300 LjG1.1_chr4 24171584 24184101 -
2 domain predictions
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