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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR033734
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.638s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0132529.1
n.a. PREDICTED: agglutinin-like [Glycine max] gi|356569525|ref|XP_003552950.1| chr0 60484390 60488600 -
2 domain predictions
1 GO term
Lj2g3v2278530.1
n.a. Myrosinase-binding protein-like protein [Medicago truncatula] gi|357490819|ref|XP_003615697.1| chr2 33290107 33293944 -
2 domain predictions
1 GO term
Lj3g3v0290490.4
n.a. Agglutinin alpha chain [Medicago truncatula] gi|357454743|ref|XP_003597652.1| chr3 2040849 2046513 +
2 domain predictions
1 GO term
Lj3g3v2718780.1
n.a. Agglutinin alpha chain [Medicago truncatula] gi|357454743|ref|XP_003597652.1| chr3 33171889 33173836 -
2 domain predictions
1 GO term
LotjaGi1g1v0119300.1
n.a. Jacalin lectin family protein; TAIR: AT1G19715.1 Mannose-binding lectin superfamily protein; Swiss-Prot: sp|F4HQX1|JAL3_ARATH Jacalin-related lectin 3; TrEMBL-Plants: tr|G7JZI6|G7JZI6_MEDTR Mannose-binding lectin superfamily protein; Found in the gene: LotjaGi1g1v0119300 LjG1.1_chr1 18845895 18849594 -
2 domain predictions
1 GO term
LotjaGi6g1v0123300.1
n.a. Jacalin lectin family protein; TAIR: AT1G19715.1 Mannose-binding lectin superfamily protein; Swiss-Prot: sp|F4HQX1|JAL3_ARATH Jacalin-related lectin 3; TrEMBL-Plants: tr|A0A0B2RMC1|A0A0B2RMC1_GLYSO Agglutinin; Found in the gene: LotjaGi6g1v0123300 LjG1.1_chr6 31486845 31492331 -
2 domain predictions
1 GO term