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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036018
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 26 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.319s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0783500.1
n.a. Myosin; TAIR: AT1G54560.1 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp|F4HWY6|MYO11_ARATH Myosin-11; TrEMBL-Plants: tr|A0A072U4E6|A0A072U4E6_MEDTR DIL domain myosin family protein; Found in the gene: LotjaGi1g1v0783500 LjG1.1_chr1 135653831 135667098 +
2 domain predictions
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LotjaGi1g1v0783500.3
n.a. Myosin family protein, putative, expressed; TAIR: AT1G54560.1 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp|F4HWY6|MYO11_ARATH Myosin-11; TrEMBL-Plants: tr|A0A072U4E6|A0A072U4E6_MEDTR DIL domain myosin family protein; Found in the gene: LotjaGi1g1v0783500 LjG1.1_chr1 135654311 135666721 +
2 domain predictions
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LotjaGi1g1v0783500.4
n.a. Myosin family protein, putative, expressed; TAIR: AT1G54560.2 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp|F4HWY6|MYO11_ARATH Myosin-11; TrEMBL-Plants: tr|A0A072U4E6|A0A072U4E6_MEDTR DIL domain myosin family protein; Found in the gene: LotjaGi1g1v0783500 LjG1.1_chr1 135654490 135666721 +
2 domain predictions
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LotjaGi1g1v0783500.5
n.a. Myosin family protein, putative, expressed; TAIR: AT1G54560.1 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp|F4HWY6|MYO11_ARATH Myosin-11; TrEMBL-Plants: tr|A0A0B2Q046|A0A0B2Q046_GLYSO Myosin-J heavy chain; Found in the gene: LotjaGi1g1v0783500 LjG1.1_chr1 135654633 135666721 +
2 domain predictions
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LotjaGi1g1v0783500.6
n.a. Myosin family protein, putative, expressed; TAIR: AT1G54560.1 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp|F4HWY6|MYO11_ARATH Myosin-11; TrEMBL-Plants: tr|A0A072U4E6|A0A072U4E6_MEDTR DIL domain myosin family protein; Found in the gene: LotjaGi1g1v0783500 LjG1.1_chr1 135654633 135666721 +
2 domain predictions
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LotjaGi2g1v0020800.1
n.a. Myosin; TAIR: AT1G04160.1 myosin XI B; Swiss-Prot: sp|F4I460|MYO8_ARATH Myosin-8; TrEMBL-Plants: tr|A0A0R0E5G3|A0A0R0E5G3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0020800 LjG1.1_chr2 7557978 7582461 -
2 domain predictions
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LotjaGi3g1v0129700.1
n.a. Myosin family protein, putative, expressed; TAIR: AT2G31900.1 myosin-like protein XIF; Swiss-Prot: sp|F4IRU3|MYO12_ARATH Myosin-12; TrEMBL-Plants: tr|V7BT17|V7BT17_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0129700 LjG1.1_chr3 15983025 15999521 +
2 domain predictions
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LotjaGi3g1v0129700.4
n.a. Myosin family protein, putative, expressed; TAIR: AT2G31900.1 myosin-like protein XIF; Swiss-Prot: sp|F4IRU3|MYO12_ARATH Myosin-12; TrEMBL-Plants: tr|I1KTU1|I1KTU1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0129700 LjG1.1_chr3 15983473 15999113 +
2 domain predictions
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LotjaGi3g1v0129700.5
n.a. Myosin family protein, putative, expressed; TAIR: AT2G31900.1 myosin-like protein XIF; Swiss-Prot: sp|F4IRU3|MYO12_ARATH Myosin-12; TrEMBL-Plants: tr|V7BT17|V7BT17_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0129700 LjG1.1_chr3 15983473 15999113 +
2 domain predictions
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LotjaGi3g1v0129700.6
n.a. Myosin family protein, putative, expressed; TAIR: AT2G31900.1 myosin-like protein XIF; Swiss-Prot: sp|F4IRU3|MYO12_ARATH Myosin-12; TrEMBL-Plants: tr|V7BT17|V7BT17_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0129700 LjG1.1_chr3 15985001 15999113 +
2 domain predictions
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LotjaGi4g1v0328000.1
n.a. Myosin; TAIR: AT5G20490.2 myosin family protein with Dil; Swiss-Prot: sp|F4K5J1|MYO17_ARATH Myosin-17; TrEMBL-Plants: tr|A0A072US24|A0A072US24_MEDTR DIL domain myosin family protein; Found in the gene: LotjaGi4g1v0328000 LjG1.1_chr4 70610628 70632175 -
2 domain predictions
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LotjaGi4g1v0328000.2
n.a. Myosin family protein, putative, expressed; TAIR: AT5G20490.3 myosin family protein with Dil; Swiss-Prot: sp|F4K5J1|MYO17_ARATH Myosin-17; TrEMBL-Plants: tr|A0A072US24|A0A072US24_MEDTR DIL domain myosin family protein; Found in the gene: LotjaGi4g1v0328000 LjG1.1_chr4 70612619 70630051 -
2 domain predictions
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LotjaGi5g1v0045300.1
n.a. myosin; TAIR: AT4G33200.1 myosin; Swiss-Prot: sp|Q0WPU1|MYO15_ARATH Myosin-15; TrEMBL-Plants: tr|K7M5Y2|K7M5Y2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0045300 LjG1.1_chr5 7638794 7662952 -
2 domain predictions
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LotjaGi5g1v0045300.2
n.a. myosin; TAIR: AT4G33200.1 myosin; Swiss-Prot: sp|Q0WPU1|MYO15_ARATH Myosin-15; TrEMBL-Plants: tr|K7M5Y2|K7M5Y2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0045300 LjG1.1_chr5 7642630 7662762 -
2 domain predictions
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LotjaGi5g1v0045300.3
n.a. myosin; TAIR: AT4G33200.1 myosin; Swiss-Prot: sp|Q0WPU1|MYO15_ARATH Myosin-15; TrEMBL-Plants: tr|K7M5Y2|K7M5Y2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0045300 LjG1.1_chr5 7642839 7662762 -
2 domain predictions
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LotjaGi5g1v0045300.4
n.a. myosin; TAIR: AT4G33200.1 myosin; Swiss-Prot: sp|Q0WPU1|MYO15_ARATH Myosin-15; TrEMBL-Plants: tr|K7M5Y2|K7M5Y2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0045300 LjG1.1_chr5 7642870 7662762 -
2 domain predictions
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LotjaGi5g1v0151100.1
n.a. Myosin; TAIR: AT5G43900.3 myosin 2; Swiss-Prot: sp|Q9LKB9|MYO6_ARATH Myosin-6; TrEMBL-Plants: tr|K7LHD6|K7LHD6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0151100 LjG1.1_chr5 39437660 39463032 -
2 domain predictions
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LotjaGi5g1v0151100.2
n.a. Myosin; TAIR: AT5G43900.3 myosin 2; Swiss-Prot: sp|Q9LKB9|MYO6_ARATH Myosin-6; TrEMBL-Plants: tr|K7LHD6|K7LHD6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0151100 LjG1.1_chr5 39439235 39460325 -
2 domain predictions
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LotjaGi5g1v0151100.3
n.a. Myosin; TAIR: AT5G43900.3 myosin 2; Swiss-Prot: sp|Q9LKB9|MYO6_ARATH Myosin-6; TrEMBL-Plants: tr|I1L8I7|I1L8I7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0151100 LjG1.1_chr5 39439235 39460325 -
2 domain predictions
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LotjaGi5g1v0178200.1
n.a. Myosin; TAIR: AT1G54560.2 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp|F4HWY6|MYO11_ARATH Myosin-11; TrEMBL-Plants: tr|A0A0R0GUH4|A0A0R0GUH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0178200 LjG1.1_chr5 45507664 45524604 +
2 domain predictions
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LotjaGi5g1v0178200.2
n.a. Myosin; TAIR: AT1G54560.2 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp|F4HWY6|MYO11_ARATH Myosin-11; TrEMBL-Plants: tr|K7LZ94|K7LZ94_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0178200 LjG1.1_chr5 45507721 45524604 +
2 domain predictions
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LotjaGi5g1v0178200.3
n.a. Myosin; TAIR: AT1G54560.1 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp|F4HWY6|MYO11_ARATH Myosin-11; TrEMBL-Plants: tr|A0A0R0GUH4|A0A0R0GUH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0178200 LjG1.1_chr5 45509454 45523763 +
2 domain predictions
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LotjaGi5g1v0178200.4
n.a. Myosin family protein, putative, expressed; TAIR: AT1G54560.1 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp|F4HWY6|MYO11_ARATH Myosin-11; TrEMBL-Plants: tr|K7LZ94|K7LZ94_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0178200 LjG1.1_chr5 45509463 45523404 +
2 domain predictions
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LotjaGi5g1v0178200.5
n.a. Myosin family protein, putative, expressed; TAIR: AT1G08730.2 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp|F4HXP9|MYO9_ARATH Myosin-9; TrEMBL-Plants: tr|A0A0R0GUH4|A0A0R0GUH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0178200 LjG1.1_chr5 45509463 45523763 +
2 domain predictions
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LotjaGi5g1v0210600.1
n.a. Myosin; TAIR: AT1G54560.2 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp|F4HWY6|MYO11_ARATH Myosin-11; TrEMBL-Plants: tr|I1NIS2|I1NIS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0210600 LjG1.1_chr5 51460873 51475499 -
2 domain predictions
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LotjaGi5g1v0210600.2
n.a. Myosin family protein, putative, expressed; TAIR: AT1G54560.1 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp|F4HWY6|MYO11_ARATH Myosin-11; TrEMBL-Plants: tr|I1NIS2|I1NIS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0210600 LjG1.1_chr5 51461296 51473466 -
2 domain predictions
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