Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036188
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 237 results. Now displaying 1 of 5 with 50 rows per page. This search has taken 5.836s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Amine oxidase, putative; TAIR: AT2G43020.1 polyamine oxidase 2; Swiss-Prot: sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2; TrEMBL-Plants: tr|G7KD02|G7KD02_MEDTR Polyamine oxidase-like protein; Found in the gene: LotjaGi1g1v0046900 LjG1.1_chr1 6391732 6396946 +
n.a. Amine oxidase, putative; TAIR: AT2G43020.1 polyamine oxidase 2; Swiss-Prot: sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2; TrEMBL-Plants: tr|G7KD02|G7KD02_MEDTR Polyamine oxidase-like protein; Found in the gene: LotjaGi1g1v0046900 LjG1.1_chr1 6392357 6396166 +
n.a. Amine oxidase, putative; TAIR: AT2G43020.1 polyamine oxidase 2; Swiss-Prot: sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2; TrEMBL-Plants: tr|G7KD02|G7KD02_MEDTR Polyamine oxidase-like protein; Found in the gene: LotjaGi1g1v0046900 LjG1.1_chr1 6392438 6396166 +
n.a. Geranylgeranyl reductase; TAIR: AT1G74470.1 Pyridine nucleotide-disulfide oxidoreductase family protein; Swiss-Prot: sp|Q9ZS34|CHLP_TOBAC Geranylgeranyl diphosphate reductase, chloroplastic; TrEMBL-Plants: tr|G7K2X2|G7K2X2_MEDTR Pyridine nucleotide-disulfide oxidoreductase; Found in the gene: LotjaGi1g1v0057100 LjG1.1_chr1 7980406 7986739 -
n.a. Lycopene beta/epsilon cyclase; TAIR: AT2G32640.1 Lycopene beta/epsilon cyclase protein; Swiss-Prot: sp|Q5HWE2|PLSX_CAMJR Phosphate acyltransferase; TrEMBL-Plants: tr|I1M7F1|I1M7F1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0062900 LjG1.1_chr1 8755286 8763613 -
n.a. Lycopene beta/epsilon cyclase; TAIR: AT2G32640.1 Lycopene beta/epsilon cyclase protein; Swiss-Prot: sp|Q5HWE2|PLSX_CAMJR Phosphate acyltransferase; TrEMBL-Plants: tr|B0BLJ7|B0BLJ7_LOTJA CM0545.530.nc protein; Found in the gene: LotjaGi1g1v0062900 LjG1.1_chr1 8755286 8763613 -
n.a. Lycopene beta/epsilon cyclase; TAIR: AT2G32640.1 Lycopene beta/epsilon cyclase protein; Swiss-Prot: sp|Q5HWE2|PLSX_CAMJR Phosphate acyltransferase; TrEMBL-Plants: tr|I1M7F1|I1M7F1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0062900 LjG1.1_chr1 8755568 8763540 -
n.a. Lycopene beta/epsilon cyclase; TAIR: AT2G32640.2 Lycopene beta/epsilon cyclase protein; Swiss-Prot: sp|Q5HWE2|PLSX_CAMJR Phosphate acyltransferase; TrEMBL-Plants: tr|B0BLJ7|B0BLJ7_LOTJA CM0545.530.nc protein; Found in the gene: LotjaGi1g1v0062900 LjG1.1_chr1 8757066 8763431 -
n.a. Lycopene beta/epsilon cyclase; TAIR: AT2G32640.1 Lycopene beta/epsilon cyclase protein; Swiss-Prot: sp|Q5HWE2|PLSX_CAMJR Phosphate acyltransferase; TrEMBL-Plants: tr|I1M7F1|I1M7F1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0062900 LjG1.1_chr1 8757066 8763431 -
n.a. Lycopene beta/epsilon cyclase; TAIR: AT2G32640.1 Lycopene beta/epsilon cyclase protein; Swiss-Prot: sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic; TrEMBL-Plants: tr|B0BLJ7|B0BLJ7_LOTJA CM0545.530.nc protein; Found in the gene: LotjaGi1g1v0063400 LjG1.1_chr1 8792130 8802394 -
n.a. Lycopene beta/epsilon cyclase; TAIR: AT2G32640.2 Lycopene beta/epsilon cyclase protein; Swiss-Prot: sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic; TrEMBL-Plants: tr|B0BLJ7|B0BLJ7_LOTJA CM0545.530.nc protein; Found in the gene: LotjaGi1g1v0063400 LjG1.1_chr1 8792437 8802040 -
n.a. Lycopene beta/epsilon cyclase; TAIR: AT2G32640.1 Lycopene beta/epsilon cyclase protein; Swiss-Prot: sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic; TrEMBL-Plants: tr|B0BLJ7|B0BLJ7_LOTJA CM0545.530.nc protein; Found in the gene: LotjaGi1g1v0063400 LjG1.1_chr1 8792437 8802040 -
n.a. Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial; TAIR: AT2G29990.1 alternative NAD(P)H dehydrogenase 2; Swiss-Prot: sp|O80874|NDA2_ARATH Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial; TrEMBL-Plants: tr|G7JZJ2|G7JZJ2_MEDTR NAD(P)H dehydrogenase B2; Found in the gene: LotjaGi1g1v0119000 LjG1.1_chr1 18817658 18826545 +
n.a. Internal alternative nad(P)h-ubiquinone oxidoreductase a1, mitochondrial; TAIR: AT1G07180.1 alternative NAD(P)H dehydrogenase 1; Swiss-Prot: sp|Q8GWA1|NDA1_ARATH Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial; TrEMBL-Plants: tr|G7JZJ2|G7JZJ2_MEDTR NAD(P)H dehydrogenase B2; Found in the gene: LotjaGi1g1v0119000 LjG1.1_chr1 18817781 18822253 +
n.a. Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial; TAIR: AT2G29990.1 alternative NAD(P)H dehydrogenase 2; Swiss-Prot: sp|O80874|NDA2_ARATH Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial; TrEMBL-Plants: tr|G7JZJ2|G7JZJ2_MEDTR NAD(P)H dehydrogenase B2; Found in the gene: LotjaGi1g1v0119000 LjG1.1_chr1 18817781 18822253 +
n.a. Flavin-containing monooxygenase; TAIR: AT5G07800.1 Flavin-binding monooxygenase family protein; Swiss-Prot: sp|Q9FF12|GSXL9_ARATH Flavin-containing monooxygenase FMO GS-OX-like 9; TrEMBL-Plants: tr|A0A151SLP0|A0A151SLP0_CAJCA Flavin-containing monooxygenase FMO GS-OX3; Found in the gene: LotjaGi1g1v0192600 LjG1.1_chr1 38068566 38079149 +
n.a. Flavin-containing monooxygenase; TAIR: AT5G07800.1 Flavin-binding monooxygenase family protein; Swiss-Prot: sp|Q9FF12|GSXL9_ARATH Flavin-containing monooxygenase FMO GS-OX-like 9; TrEMBL-Plants: tr|A0A151SLP0|A0A151SLP0_CAJCA Flavin-containing monooxygenase FMO GS-OX3; Found in the gene: LotjaGi1g1v0192600 LjG1.1_chr1 38075164 38078261 +
n.a. Glutamate synthase, putative; TAIR: AT5G53460.1 NADH-dependent glutamate synthase 1; Swiss-Prot: sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic; TrEMBL-Plants: tr|A0A0B2SWZ8|A0A0B2SWZ8_GLYSO Glutamate synthase [NADH], amyloplastic; Found in the gene: LotjaGi1g1v0224700 LjG1.1_chr1 51351414 51364950 -
n.a. Glutamate synthase, putative; TAIR: AT5G53460.1 NADH-dependent glutamate synthase 1; Swiss-Prot: sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic; TrEMBL-Plants: tr|A0A072VE66|A0A072VE66_MEDTR NADH glutamate synthase; Found in the gene: LotjaGi1g1v0224700 LjG1.1_chr1 51351967 51362946 -
n.a. Glutamate synthase, putative; TAIR: AT5G53460.1 NADH-dependent glutamate synthase 1; Swiss-Prot: sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic; TrEMBL-Plants: tr|A0A0B2SWZ8|A0A0B2SWZ8_GLYSO Glutamate synthase [NADH], amyloplastic; Found in the gene: LotjaGi1g1v0224700 LjG1.1_chr1 51351967 51362982 -
n.a. Glutamate synthase, putative; TAIR: AT5G53460.1 NADH-dependent glutamate synthase 1; Swiss-Prot: sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic; TrEMBL-Plants: tr|A0A072VE66|A0A072VE66_MEDTR NADH glutamate synthase; Found in the gene: LotjaGi1g1v0224700 LjG1.1_chr1 51351598 51365085 -
n.a. Glutamate synthase, putative; TAIR: AT5G53460.1 NADH-dependent glutamate synthase 1; Swiss-Prot: sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic; TrEMBL-Plants: tr|A0A0B2SWZ8|A0A0B2SWZ8_GLYSO Glutamate synthase [NADH], amyloplastic; Found in the gene: LotjaGi1g1v0224700 LjG1.1_chr1 51351950 51360344 -
n.a. Glutamate synthase, putative; TAIR: AT5G53460.1 NADH-dependent glutamate synthase 1; Swiss-Prot: sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic; TrEMBL-Plants: tr|A0A0B2SWZ8|A0A0B2SWZ8_GLYSO Glutamate synthase [NADH], amyloplastic; Found in the gene: LotjaGi1g1v0224700 LjG1.1_chr1 51351950 51361264 -
n.a. Glutamate synthase, putative; TAIR: AT5G53460.1 NADH-dependent glutamate synthase 1; Swiss-Prot: sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic; TrEMBL-Plants: tr|A0A0S3RN10|A0A0S3RN10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0224700 LjG1.1_chr1 51351950 51362524 -
n.a. Glutamate synthase, putative; TAIR: AT5G53460.1 NADH-dependent glutamate synthase 1; Swiss-Prot: sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic; TrEMBL-Plants: tr|Q93WZ7|Q93WZ7_PHAVU NADH glutamate synthase; Found in the gene: LotjaGi1g1v0224700 LjG1.1_chr1 51351967 51355909 -
n.a. Glutamate synthase, putative; TAIR: AT5G53460.1 NADH-dependent glutamate synthase 1; Swiss-Prot: sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic; TrEMBL-Plants: tr|A0A072VE66|A0A072VE66_MEDTR NADH glutamate synthase; Found in the gene: LotjaGi1g1v0224700 LjG1.1_chr1 51351967 51362946 -
n.a. Flavin-containing monooxygenase; TAIR: AT1G48910.1 Flavin-containing monooxygenase family protein; Swiss-Prot: sp|Q9FVQ0|YUC10_ARATH Probable indole-3-pyruvate monooxygenase YUCCA10; TrEMBL-Plants: tr|K7KM38|K7KM38_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0271600 LjG1.1_chr1 66352740 66355665 +
n.a. Flavin-containing monooxygenase; TAIR: AT1G48910.1 Flavin-containing monooxygenase family protein; Swiss-Prot: sp|Q9FVQ0|YUC10_ARATH Probable indole-3-pyruvate monooxygenase YUCCA10; TrEMBL-Plants: tr|I1JY26|I1JY26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0318500 LjG1.1_chr1 76671797 76672545 -
n.a. Farnesylcysteine lyase; TAIR: AT5G63910.1 farnesylcysteine lyase; Swiss-Prot: sp|P57681|PCYOX_ARATH Farnesylcysteine lyase; TrEMBL-Plants: tr|A0A151RY30|A0A151RY30_CAJCA Putative prenylcysteine oxidase; Found in the gene: LotjaGi1g1v0322500 LjG1.1_chr1 77400403 77406400 +
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|I1K897|I1K897_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0363700 LjG1.1_chr1 83931051 83937993 +
n.a. Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|O48651|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr|A0A151TTQ0|A0A151TTQ0_CAJCA Squalene monooxygenase; Found in the gene: LotjaGi1g1v0363700 LjG1.1_chr1 83932885 83936266 +
n.a. N-methyl-L-tryptophan oxidase; TAIR: AT2G24580.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q9SJA7|SOX_ARATH Probable sarcosine oxidase; TrEMBL-Plants: tr|G7J2T2|G7J2T2_MEDTR Monomeric form sarcosine oxidase; Found in the gene: LotjaGi1g1v0395400 LjG1.1_chr1 88135086 88136886 -
n.a. Flavin-containing monooxygenase; TAIR: AT5G25620.1 Flavin-binding monooxygenase family protein; Swiss-Prot: sp|Q8VZ59|YUC6_ARATH Indole-3-pyruvate monooxygenase YUCCA6; TrEMBL-Plants: tr|I1JUR3|I1JUR3_SOYBN Flavin-containing monooxygenase; Found in the gene: LotjaGi1g1v0399200 LjG1.1_chr1 88622558 88627702 +
n.a. Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2; TAIR: AT5G49555.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|Q68FT3|PYRD2_RAT Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2; TrEMBL-Plants: tr|I1JCQ0|I1JCQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0416500 LjG1.1_chr1 90982882 90989367 -
n.a. Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2; TAIR: AT5G49555.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|Q68FT3|PYRD2_RAT Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2; TrEMBL-Plants: tr|I1JCQ0|I1JCQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0416500 LjG1.1_chr1 90982882 90989367 -
n.a. Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2; TAIR: AT5G49555.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|Q3MHH6|PYRD2_BOVIN Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2; TrEMBL-Plants: tr|I1JCQ0|I1JCQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0416700 LjG1.1_chr1 90995490 91008153 -
n.a. Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2; TAIR: AT5G49555.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|Q3MHH6|PYRD2_BOVIN Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2; TrEMBL-Plants: tr|I1JCQ0|I1JCQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0416700 LjG1.1_chr1 91002071 91007884 -
n.a. Lysine-specific histone demethylase 1 like 1; TAIR: AT4G16310.1 LSD1-like 3; Swiss-Prot: sp|F4JLS1|LDL3_ARATH Lysine-specific histone demethylase 1 homolog 3; TrEMBL-Plants: tr|A0A072V301|A0A072V301_MEDTR Polyamine oxidase; Found in the gene: LotjaGi1g1v0425700 LjG1.1_chr1 92008591 92020282 -
n.a. Flavin-containing monooxygenase; TAIR: AT1G19250.1 flavin-dependent monooxygenase 1; Swiss-Prot: sp|Q9LMA1|FMO1_ARATH Probable flavin-containing monooxygenase 1; TrEMBL-Plants: tr|A0A151RPM5|A0A151RPM5_CAJCA Putative flavin-containing monooxygenase 1; Found in the gene: LotjaGi1g1v0556100 LjG1.1_chr1 108831037 108835902 +
n.a. Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; TAIR: AT3G24200.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|Q6DF46|COQ6_XENTR Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; TrEMBL-Plants: tr|V7B491|V7B491_PHAVU Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; Found in the gene: LotjaGi1g1v0594000 LjG1.1_chr1 113392794 113402251 -
n.a. Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; TAIR: AT3G24200.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp|Q9Y2Z9|COQ6_HUMAN Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; TrEMBL-Plants: tr|A0A0L9U4M4|A0A0L9U4M4_PHAAN Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; Found in the gene: LotjaGi1g1v0594000 LjG1.1_chr1 113393142 113394446 -
n.a. D-amino acid dehydrogenase; TAIR: AT5G48440.1 FAD-dependent oxidoreductase family protein; Swiss-Prot: sp|Q98F08|DADA1_RHILO D-amino acid dehydrogenase 1; TrEMBL-Plants: tr|G7KWY6|G7KWY6_MEDTR FAD-dependent oxidoreductase; Found in the gene: LotjaGi1g1v0595800 LjG1.1_chr1 113542022 113548631 +
n.a. Monodehydroascorbate reductase; TAIR: AT3G27820.1 monodehydroascorbate reductase 4; Swiss-Prot: sp|Q9LK94|MDAR4_ARATH Monodehydroascorbate reductase 4, peroxisomal; TrEMBL-Plants: tr|A0A072TXL0|A0A072TXL0_MEDTR Monodehydroascorbate reductase; Found in the gene: LotjaGi1g1v0608300 LjG1.1_chr1 115273073 115278372 -
n.a. Lycopene beta-cyclase; TAIR: AT3G10230.1 lycopene cyclase; Swiss-Prot: sp|Q43503|LCYB_SOLLC Lycopene beta cyclase, chloroplastic; TrEMBL-Plants: tr|A0A151RUY9|A0A151RUY9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0665500 LjG1.1_chr1 122741366 122749740 +
n.a. Lycopene beta-cyclase; TAIR: AT3G10230.1 lycopene cyclase; Swiss-Prot: sp|Q43503|LCYB_SOLLC Lycopene beta cyclase, chloroplastic; TrEMBL-Plants: tr|A0A151RUY9|A0A151RUY9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0665500 LjG1.1_chr1 122741388 122749633 +
n.a. Lycopene beta-cyclase; TAIR: AT3G10230.1 lycopene cyclase; Swiss-Prot: sp|Q43503|LCYB_SOLLC Lycopene beta cyclase, chloroplastic; TrEMBL-Plants: tr|A0A151RUY9|A0A151RUY9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0665500 LjG1.1_chr1 122741431 122749633 +
n.a. Lycopene beta-cyclase; TAIR: AT3G10230.1 lycopene cyclase; Swiss-Prot: sp|Q43503|LCYB_SOLLC Lycopene beta cyclase, chloroplastic; TrEMBL-Plants: tr|A0A151RUY9|A0A151RUY9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0665500 LjG1.1_chr1 122741884 122743403 +
n.a. Flavin-containing monooxygenase; TAIR: AT4G28720.1 Flavin-binding monooxygenase family protein; Swiss-Prot: sp|Q9SVU0|YUC8_ARATH Probable indole-3-pyruvate monooxygenase YUCCA8; TrEMBL-Plants: tr|I1N9Y0|I1N9Y0_SOYBN Flavin-containing monooxygenase; Found in the gene: LotjaGi1g1v0701500 LjG1.1_chr1 126984907 126987173 -
n.a. Long-chain-alcohol oxidase; TAIR: AT4G28570.1 Long-chain fatty alcohol dehydrogenase family protein; Swiss-Prot: sp|B5WWZ9|FAO2_LOTJA Long-chain-alcohol oxidase FAO2; TrEMBL-Plants: tr|A0A0B2P496|A0A0B2P496_GLYSO Long-chain-alcohol oxidase; Found in the gene: LotjaGi1g1v0706600 LjG1.1_chr1 127487959 127492331 -
n.a. Long-chain-alcohol oxidase; TAIR: AT4G28570.1 Long-chain fatty alcohol dehydrogenase family protein; Swiss-Prot: sp|B5WWZ9|FAO2_LOTJA Long-chain-alcohol oxidase FAO2; TrEMBL-Plants: tr|A0A0B2P496|A0A0B2P496_GLYSO Long-chain-alcohol oxidase; Found in the gene: LotjaGi1g1v0706600 LjG1.1_chr1 127488216 127492241 -