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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036900
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We have found 23 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.210s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0083300.1
n.a. Phosphoglucosamine mutase; TAIR: AT1G23190.1 Phosphoglucomutase/phosphomannomutase family protein; Swiss-Prot: sp|Q9SM60|PGMC_PEA Phosphoglucomutase, cytoplasmic; TrEMBL-Plants: tr|I1K5M9|I1K5M9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0083300 LjG1.1_chr1 11970391 11977012 -
2 domain predictions
2 GO terms
LotjaGi1g1v0083300.2
n.a. Phosphoglucosamine mutase; TAIR: AT1G23190.1 Phosphoglucomutase/phosphomannomutase family protein; Swiss-Prot: sp|Q9SM60|PGMC_PEA Phosphoglucomutase, cytoplasmic; TrEMBL-Plants: tr|I1K5M9|I1K5M9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0083300 LjG1.1_chr1 11970994 11976147 -
2 domain predictions
2 GO terms
LotjaGi1g1v0083300.3
n.a. Phosphoglucosamine mutase; TAIR: AT1G23190.1 Phosphoglucomutase/phosphomannomutase family protein; Swiss-Prot: sp|Q9SM60|PGMC_PEA Phosphoglucomutase, cytoplasmic; TrEMBL-Plants: tr|I1K5M9|I1K5M9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0083300 LjG1.1_chr1 11970994 11976318 -
2 domain predictions
2 GO terms
LotjaGi1g1v0083300.4
n.a. Phosphoglucosamine mutase; TAIR: AT1G23190.1 Phosphoglucomutase/phosphomannomutase family protein; Swiss-Prot: sp|Q9SM60|PGMC_PEA Phosphoglucomutase, cytoplasmic; TrEMBL-Plants: tr|I1K5M9|I1K5M9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0083300 LjG1.1_chr1 11970994 11976368 -
2 domain predictions
2 GO terms
LotjaGi1g1v0083300.5
n.a. Phosphoglucosamine mutase; TAIR: AT1G23190.1 Phosphoglucomutase/phosphomannomutase family protein; Swiss-Prot: sp|Q9SM60|PGMC_PEA Phosphoglucomutase, cytoplasmic; TrEMBL-Plants: tr|I1K5M9|I1K5M9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0083300 LjG1.1_chr1 11970994 11976579 -
2 domain predictions
2 GO terms
LotjaGi2g1v0416600.1
n.a. Phosphoglucosamine mutase; TAIR: AT5G18070.1 phosphoglucosamine mutase-like protein; Swiss-Prot: sp|P57750|AGM1_ARATH Phosphoacetylglucosamine mutase; TrEMBL-Plants: tr|G7JZT7|G7JZT7_MEDTR Phosphogluco-mutase; Found in the gene: LotjaGi2g1v0416600 LjG1.1_chr2 91444262 91449560 +
2 domain predictions
2 GO terms
LotjaGi2g1v0416600.2
n.a. Phosphoglucosamine mutase; TAIR: AT5G18070.1 phosphoglucosamine mutase-like protein; Swiss-Prot: sp|P57750|AGM1_ARATH Phosphoacetylglucosamine mutase; TrEMBL-Plants: tr|G7JZT7|G7JZT7_MEDTR Phosphogluco-mutase; Found in the gene: LotjaGi2g1v0416600 LjG1.1_chr2 91445535 91449221 +
2 domain predictions
2 GO terms
LotjaGi2g1v0416600.3
n.a. Phosphoglucosamine mutase; TAIR: AT5G18070.1 phosphoglucosamine mutase-like protein; Swiss-Prot: sp|P57750|AGM1_ARATH Phosphoacetylglucosamine mutase; TrEMBL-Plants: tr|G7JZT7|G7JZT7_MEDTR Phosphogluco-mutase; Found in the gene: LotjaGi2g1v0416600 LjG1.1_chr2 91445535 91449233 +
2 domain predictions
2 GO terms
LotjaGi4g1v0454400.1
n.a. Phosphoglucosamine mutase; TAIR: AT1G70730.1 Phosphoglucomutase/phosphomannomutase family protein; Swiss-Prot: sp|Q9SM60|PGMC_PEA Phosphoglucomutase, cytoplasmic; TrEMBL-Plants: tr|I1K5M9|I1K5M9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0454400 LjG1.1_chr4 82612731 82619525 +
2 domain predictions
2 GO terms
LotjaGi4g1v0454400.2
n.a. Phosphoglucosamine mutase; TAIR: AT1G70730.1 Phosphoglucomutase/phosphomannomutase family protein; Swiss-Prot: sp|Q9SM60|PGMC_PEA Phosphoglucomutase, cytoplasmic; TrEMBL-Plants: tr|I1K5M9|I1K5M9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0454400 LjG1.1_chr4 82613117 82618798 +
2 domain predictions
2 GO terms
LotjaGi4g1v0454400.3
n.a. Phosphoglucosamine mutase; TAIR: AT1G70730.1 Phosphoglucomutase/phosphomannomutase family protein; Swiss-Prot: sp|Q9SM60|PGMC_PEA Phosphoglucomutase, cytoplasmic; TrEMBL-Plants: tr|I1K5M9|I1K5M9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0454400 LjG1.1_chr4 82613248 82618798 +
2 domain predictions
2 GO terms
LotjaGi4g1v0454400.4
n.a. Phosphoglucomutase; TAIR: AT1G70730.1 Phosphoglucomutase/phosphomannomutase family protein; Swiss-Prot: sp|Q9SM60|PGMC_PEA Phosphoglucomutase, cytoplasmic; TrEMBL-Plants: tr|I1K5M9|I1K5M9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0454400 LjG1.1_chr4 82616435 82617819 +
2 domain predictions
2 GO terms
LotjaGi5g1v0274200.1
n.a. Phosphoglucosamine mutase family protein; TAIR: AT5G17530.5 phosphoglucosamine mutase family protein; Swiss-Prot: sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase; TrEMBL-Plants: tr|G7I384|G7I384_MEDTR Phosphoglucomutase/phosphomannomutase family protein; Found in the gene: LotjaGi5g1v0274200 LjG1.1_chr5 58781107 58792974 +
2 domain predictions
2 GO terms
LotjaGi5g1v0274200.2
n.a. Phosphoglucosamine mutase family protein; TAIR: AT5G17530.3 phosphoglucosamine mutase family protein; Swiss-Prot: sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase; TrEMBL-Plants: tr|G7I385|G7I385_MEDTR Phosphoglucomutase/phosphomannomutase family protein; Found in the gene: LotjaGi5g1v0274200 LjG1.1_chr5 58781107 58792974 +
2 domain predictions
2 GO terms
LotjaGi5g1v0274200.3
n.a. Phosphoglucosamine mutase family protein; TAIR: AT5G17530.1 phosphoglucosamine mutase family protein; Swiss-Prot: sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase; TrEMBL-Plants: tr|G7I385|G7I385_MEDTR Phosphoglucomutase/phosphomannomutase family protein; Found in the gene: LotjaGi5g1v0274200 LjG1.1_chr5 58781641 58788673 +
2 domain predictions
2 GO terms
LotjaGi5g1v0274200.4
n.a. Phosphoglucosamine mutase family protein; TAIR: AT5G17530.3 phosphoglucosamine mutase family protein; Swiss-Prot: sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase; TrEMBL-Plants: tr|G7I385|G7I385_MEDTR Phosphoglucomutase/phosphomannomutase family protein; Found in the gene: LotjaGi5g1v0274200 LjG1.1_chr5 58781838 58788673 +
2 domain predictions
2 GO terms
LotjaGi5g1v0274200.5
n.a. Phosphoglucosamine mutase family protein; TAIR: AT5G17530.1 phosphoglucosamine mutase family protein; Swiss-Prot: sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase; TrEMBL-Plants: tr|A0A1J7GMM4|A0A1J7GMM4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0274200 LjG1.1_chr5 58782299 58788673 +
2 domain predictions
2 GO terms
LotjaGi5g1v0274200.6
n.a. Phosphoglucosamine mutase family protein; TAIR: AT5G17530.1 phosphoglucosamine mutase family protein; Swiss-Prot: sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase; TrEMBL-Plants: tr|A0A1J7GMM4|A0A1J7GMM4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0274200 LjG1.1_chr5 58782731 58788673 +
2 domain predictions
2 GO terms
LotjaGi5g1v0274200.7
n.a. Phosphoglucosamine mutase family protein; TAIR: AT5G17530.1 phosphoglucosamine mutase family protein; Swiss-Prot: sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase; TrEMBL-Plants: tr|G7I385|G7I385_MEDTR Phosphoglucomutase/phosphomannomutase family protein; Found in the gene: LotjaGi5g1v0274200 LjG1.1_chr5 58782946 58788673 +
2 domain predictions
2 GO terms
LotjaGi5g1v0306600.1
n.a. Phosphoglucomutase family protein; TAIR: AT5G51820.1 phosphoglucomutase; Swiss-Prot: sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplastic; TrEMBL-Plants: tr|I1LDX0|I1LDX0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0306600 LjG1.1_chr5 62445019 62453690 +
2 domain predictions
2 GO terms
LotjaGi5g1v0306600.2
n.a. Phosphoglucosamine mutase; TAIR: AT5G51820.1 phosphoglucomutase; Swiss-Prot: sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplastic; TrEMBL-Plants: tr|G7IC40|G7IC40_MEDTR Phosphogluco-mutase; Found in the gene: LotjaGi5g1v0306600 LjG1.1_chr5 62445201 62453728 +
2 domain predictions
2 GO terms
LotjaGi5g1v0306600.3
n.a. Phosphoglucosamine mutase; TAIR: AT5G51820.1 phosphoglucomutase; Swiss-Prot: sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplastic; TrEMBL-Plants: tr|G7IC40|G7IC40_MEDTR Phosphogluco-mutase; Found in the gene: LotjaGi5g1v0306600 LjG1.1_chr5 62445329 62453226 +
2 domain predictions
2 GO terms
LotjaGi5g1v0306600.4
n.a. Phosphoglucomutase, putative; TAIR: AT5G51820.1 phosphoglucomutase; Swiss-Prot: sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplastic; TrEMBL-Plants: tr|I1LDX0|I1LDX0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0306600 LjG1.1_chr5 62451356 62453226 +
2 domain predictions
2 GO terms