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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR038111
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.143s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0510000.1
n.a. 40S ribosomal protein S19; TAIR: AT3G02080.1 Ribosomal protein S19e family protein; Swiss-Prot: sp|Q9SGA6|RS191_ARATH 40S ribosomal protein S19-1; TrEMBL-Plants: tr|I1JW21|I1JW21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0510000 LjG1.1_chr1 102876650 102879779 -
2 domain predictions
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LotjaGi1g1v0510000.2
n.a. 40S ribosomal protein S19; TAIR: AT5G61170.1 Ribosomal protein S19e family protein; Swiss-Prot: sp|Q9FNP8|RS193_ARATH 40S ribosomal protein S19-3; TrEMBL-Plants: tr|I1JW21|I1JW21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0510000 LjG1.1_chr1 102877939 102879631 -
2 domain predictions
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LotjaGi1g1v0510000.3
n.a. 40S ribosomal protein S19; TAIR: AT3G02080.1 Ribosomal protein S19e family protein; Swiss-Prot: sp|Q9SGA6|RS191_ARATH 40S ribosomal protein S19-1; TrEMBL-Plants: tr|I1JW21|I1JW21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0510000 LjG1.1_chr1 102877943 102879631 -
2 domain predictions
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LotjaGi1g1v0510000.4
n.a. 40S ribosomal protein S19; TAIR: AT3G02080.1 Ribosomal protein S19e family protein; Swiss-Prot: sp|Q9SGA6|RS191_ARATH 40S ribosomal protein S19-1; TrEMBL-Plants: tr|I1JW21|I1JW21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0510000 LjG1.1_chr1 102878047 102879631 -
2 domain predictions
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LotjaGi3g1v0107200.1
n.a. 40S ribosomal protein S19; TAIR: AT5G61170.1 Ribosomal protein S19e family protein; Swiss-Prot: sp|Q9FNP8|RS193_ARATH 40S ribosomal protein S19-3; TrEMBL-Plants: tr|I3SQF0|I3SQF0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0107200 LjG1.1_chr3 13230986 13233772 +
2 domain predictions
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LotjaGi3g1v0107200.2
n.a. 40S ribosomal protein S19; TAIR: AT5G61170.1 Ribosomal protein S19e family protein; Swiss-Prot: sp|Q9FNP8|RS193_ARATH 40S ribosomal protein S19-3; TrEMBL-Plants: tr|I3SQF0|I3SQF0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0107200 LjG1.1_chr3 13231193 13232486 +
2 domain predictions
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LotjaGi3g1v0107200.3
n.a. 40S ribosomal protein S19; TAIR: AT3G02080.1 Ribosomal protein S19e family protein; Swiss-Prot: sp|Q9SGA6|RS191_ARATH 40S ribosomal protein S19-1; TrEMBL-Plants: tr|I3SQF0|I3SQF0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0107200 LjG1.1_chr3 13232048 13232862 +
2 domain predictions
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LotjaGi3g1v0315200.1
n.a. 40S ribosomal protein S19; TAIR: AT3G02080.1 Ribosomal protein S19e family protein; Swiss-Prot: sp|Q9SGA6|RS191_ARATH 40S ribosomal protein S19-1; TrEMBL-Plants: tr|A0A0S3SIR5|A0A0S3SIR5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0315200 LjG1.1_chr3 66770937 66773986 +
2 domain predictions
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LotjaGi3g1v0315200.2
n.a. 40S ribosomal protein S19; TAIR: AT3G02080.1 Ribosomal protein S19e family protein; Swiss-Prot: sp|Q9SGA6|RS191_ARATH 40S ribosomal protein S19-1; TrEMBL-Plants: tr|A0A0S3SIR5|A0A0S3SIR5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0315200 LjG1.1_chr3 66772605 66773158 +
2 domain predictions
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