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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR041869
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.446s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0253900.1
n.a. Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; TAIR: AT4G24730.1 manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like protein; Swiss-Prot: sp|Q8H5F8|ADPRM_ORYSJ Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; TrEMBL-Plants: tr|V7AXG9|V7AXG9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0253900 LjG1.1_chr1 61024858 61029095 +
2 domain predictions
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LotjaGi1g1v0253900.2
n.a. Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; TAIR: AT4G24730.1 manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like protein; Swiss-Prot: sp|Q8H5F8|ADPRM_ORYSJ Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; TrEMBL-Plants: tr|V7AXG9|V7AXG9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0253900 LjG1.1_chr1 61027639 61028601 +
2 domain predictions
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LotjaGi4g1v0227800.1
n.a. Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; TAIR: AT4G24730.1 manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like protein; Swiss-Prot: sp|Q8H5F8|ADPRM_ORYSJ Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; TrEMBL-Plants: tr|A0A0B2PRR2|A0A0B2PRR2_GLYSO Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; Found in the gene: LotjaGi4g1v0227800 LjG1.1_chr4 53756964 53758993 +
2 domain predictions
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LotjaGi4g1v0227800.2
n.a. Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; TAIR: AT4G24730.1 manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like protein; Swiss-Prot: sp|Q8H5F8|ADPRM_ORYSJ Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; TrEMBL-Plants: tr|A0A0B2PRR2|A0A0B2PRR2_GLYSO Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; Found in the gene: LotjaGi4g1v0227800 LjG1.1_chr4 53757002 53758699 +
2 domain predictions
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LotjaGi4g1v0227800.3
n.a. Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; TAIR: AT4G24730.1 manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like protein; Swiss-Prot: sp|Q8H5F8|ADPRM_ORYSJ Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; TrEMBL-Plants: tr|A0A0B2PRR2|A0A0B2PRR2_GLYSO Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; Found in the gene: LotjaGi4g1v0227800 LjG1.1_chr4 53757631 53758611 +
2 domain predictions
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