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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR043128
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We have found 339 results. Now displaying 1 of 7 with 50 rows per page. This search has taken 6.317s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi0g1v0001300_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7Z9|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi0g1v0001300_LC LjG1.1_chr0 1744651 1746795 +
2 domain predictions
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LotjaGi0g1v0002500_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7Z9|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi0g1v0002500_LC LjG1.1_chr0 2864012 2866166 -
2 domain predictions
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LotjaGi0g1v0002600_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi0g1v0002600_LC LjG1.1_chr0 2947128 2949281 -
2 domain predictions
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LotjaGi0g1v0002700_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi0g1v0002700_LC LjG1.1_chr0 3023284 3025437 -
2 domain predictions
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LotjaGi0g1v0002800_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi0g1v0002800_LC LjG1.1_chr0 3098237 3100390 -
2 domain predictions
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LotjaGi1g1v0003200_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A151T1H3|A0A151T1H3_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0003200_LC LjG1.1_chr1 712323 712689 +
2 domain predictions
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LotjaGi1g1v0041900_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7X5|A0A151R7X5_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0041900_LC LjG1.1_chr1 5722398 5724289 -
2 domain predictions
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LotjaGi1g1v0048500_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC LjG1.1_chr1 6637079 6696859 +
2 domain predictions
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LotjaGi1g1v0048500_LC.2
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC LjG1.1_chr1 6642053 6674912 +
2 domain predictions
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LotjaGi1g1v0065000_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr|A0A151T8F3|A0A151T8F3_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0065000_LC LjG1.1_chr1 9000350 9000816 +
2 domain predictions
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LotjaGi1g1v0100200_LC.1
n.a. Gypsy/Ty3 element polyprotein, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W1|B5U9W1_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0100200_LC LjG1.1_chr1 15249593 15251453 +
2 domain predictions
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LotjaGi1g1v0114000_LC.1
n.a. Pol-polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151U9S6|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0114000_LC LjG1.1_chr1 17920572 17921795 +
2 domain predictions
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LotjaGi1g1v0129300_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P09523|POL_FMVD Enzymatic polyprotein; TrEMBL-Plants: tr|A0A151R3E4|A0A151R3E4_CAJCA Polyprotein; Found in the gene: LotjaGi1g1v0129300_LC LjG1.1_chr1 20616488 20617421 -
2 domain predictions
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LotjaGi1g1v0130800_LC.8
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TIH6|A0A151TIH6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0130800_LC LjG1.1_chr1 21013007 21019939 +
2 domain predictions
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LotjaGi1g1v0136100_LC.1
n.a. Gag-pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A151RBM5|A0A151RBM5_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi1g1v0136100_LC LjG1.1_chr1 22106806 22107769 -
2 domain predictions
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LotjaGi1g1v0153800_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151QNT0|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0153800_LC LjG1.1_chr1 26845339 26848257 +
2 domain predictions
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LotjaGi1g1v0169000_LC.1
n.a. Gag-pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151U2G6|A0A151U2G6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0169000_LC LjG1.1_chr1 32168376 32169412 -
2 domain predictions
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LotjaGi1g1v0173200_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7X5|A0A151R7X5_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0173200_LC LjG1.1_chr1 32995721 32996749 +
2 domain predictions
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LotjaGi1g1v0173200_LC.2
n.a. Retrovirus-related Pol polyprotein from transposon opus; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860; TrEMBL-Plants: tr|A0A151S5B2|A0A151S5B2_CAJCA Retrovirus-related Pol polyprotein from transposon opus; Found in the gene: LotjaGi1g1v0173200_LC LjG1.1_chr1 32996387 32996749 +
2 domain predictions
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LotjaGi1g1v0207900_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151R8H2|A0A151R8H2_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0207900_LC LjG1.1_chr1 45413628 45414548 -
2 domain predictions
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LotjaGi1g1v0215400_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A1J7GMU5|A0A1J7GMU5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0215400_LC LjG1.1_chr1 47458427 47462077 +
2 domain predictions
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LotjaGi1g1v0218200_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0218200_LC LjG1.1_chr1 48295808 48297961 -
2 domain predictions
 –
LotjaGi1g1v0222000_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0222000_LC LjG1.1_chr1 49343059 49345212 +
2 domain predictions
 –
LotjaGi1g1v0223100_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon gypsy; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7Z9|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0223100_LC LjG1.1_chr1 50322830 50324983 +
2 domain predictions
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LotjaGi1g1v0223500_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0223500_LC LjG1.1_chr1 50516947 50519100 -
2 domain predictions
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LotjaGi1g1v0224800_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0224800_LC LjG1.1_chr1 51478085 51480238 -
2 domain predictions
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LotjaGi1g1v0225400_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT1G01830.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151TQT4|A0A151TQT4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0225400_LC LjG1.1_chr1 52022452 52022843 -
2 domain predictions
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LotjaGi1g1v0225500_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0225500_LC LjG1.1_chr1 52082892 52085045 +
2 domain predictions
 –
LotjaGi1g1v0225600_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0225600_LC LjG1.1_chr1 52168286 52170439 +
2 domain predictions
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LotjaGi1g1v0225700_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0225700_LC LjG1.1_chr1 52249572 52251725 -
2 domain predictions
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LotjaGi1g1v0225800_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0225800_LC LjG1.1_chr1 52263527 52265680 +
2 domain predictions
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LotjaGi1g1v0226200_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0226200_LC LjG1.1_chr1 52363548 52365701 -
2 domain predictions
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LotjaGi1g1v0228000_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7X5|A0A151R7X5_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0228000_LC LjG1.1_chr1 52816318 52817199 -
2 domain predictions
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LotjaGi1g1v0229200_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0229200_LC LjG1.1_chr1 53190205 53192358 +
2 domain predictions
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LotjaGi1g1v0229300_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A1B5Z8G7|A0A1B5Z8G7_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0229300_LC LjG1.1_chr1 53233052 53237494 -
2 domain predictions
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LotjaGi1g1v0229600_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT2G42580.1 tetratricopetide-repeat thioredoxin-like 3; Swiss-Prot: sp|P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr|A0A151UHI6|A0A151UHI6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi1g1v0229600_LC LjG1.1_chr1 53576377 53580804 -
2 domain predictions
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LotjaGi1g1v0236200_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 17.6; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860; TrEMBL-Plants: tr|A0A151SU89|A0A151SU89_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0236200_LC LjG1.1_chr1 56075710 56077278 +
2 domain predictions
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LotjaGi1g1v0243000_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi1g1v0243000_LC LjG1.1_chr1 58320920 58323073 -
2 domain predictions
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LotjaGi1g1v0243200_LC.1
n.a. Polyprotein; TAIR: AT4G11670.1 DNA topoisomerase 4 subunit B (DUF810); Swiss-Prot: sp|P09523|POL_FMVD Enzymatic polyprotein; TrEMBL-Plants: tr|A0A151QZI3|A0A151QZI3_CAJCA Enzymatic polyprotein; Found in the gene: LotjaGi1g1v0243200_LC LjG1.1_chr1 58388918 58389330 +
2 domain predictions
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LotjaGi1g1v0266900_LC.1
n.a. Pol polyprotein; TAIR: AT5G09650.1 pyrophosphorylase 6; Swiss-Prot: sp|Q91DM0|POLG_PVCV1 Genome polyprotein; TrEMBL-Plants: tr|A5BVJ1|A5BVJ1_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0266900_LC LjG1.1_chr1 65255375 65270570 -
2 domain predictions
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LotjaGi1g1v0271900_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G48340.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151U2G6|A0A151U2G6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0271900_LC LjG1.1_chr1 66503680 66504124 -
2 domain predictions
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LotjaGi1g1v0277800_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151TQT4|A0A151TQT4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0277800_LC LjG1.1_chr1 68033237 68033731 -
2 domain predictions
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LotjaGi1g1v0281700_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A1B5Z8G7|A0A1B5Z8G7_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0281700_LC LjG1.1_chr1 68633913 68641871 +
2 domain predictions
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LotjaGi1g1v0289700_LC.1
n.a. Gag-Pol polyprotein; TAIR: AT1G13610.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151R1B0|A0A151R1B0_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0289700_LC LjG1.1_chr1 70301467 70302316 +
2 domain predictions
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LotjaGi1g1v0311100_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi1g1v0311100_LC LjG1.1_chr1 75472211 75486513 +
2 domain predictions
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LotjaGi1g1v0356400_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7X5|A0A151R7X5_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0356400_LC LjG1.1_chr1 82945943 82946824 -
2 domain predictions
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LotjaGi1g1v0388900_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi1g1v0388900_LC LjG1.1_chr1 87248755 87250083 +
2 domain predictions
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LotjaGi1g1v0401900_LC.1
n.a. Gag-pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151TQT4|A0A151TQT4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0401900_LC LjG1.1_chr1 89044496 89045388 +
2 domain predictions
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LotjaGi1g1v0622800_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi1g1v0622800_LC LjG1.1_chr1 116998024 117002772 +
2 domain predictions
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LotjaGi2g1v0010700_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT1G22760.1 poly(A) binding protein 3; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151TQT4|A0A151TQT4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0010700_LC LjG1.1_chr2 3868128 3868543 -
2 domain predictions
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