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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • G3DSA:3.40.50.1820
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 902 results. Now displaying 1 of 19 with 50 rows per page. This search has taken 0.197s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0014819.1
n.a. PREDICTED: acyl-protein thioesterase 2-like [Glycine max] gi|356516949|ref|XP_003527153.1| chr0 5675737 5696225 -
2 domain predictions
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Lj0g3v0015539.1
n.a. PREDICTED: acylamino-acid-releasing enzyme-like [Glycine max] gi|356536605|ref|XP_003536827.1| chr0 6053342 6056372 -
2 domain predictions
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Lj0g3v0019049.1
n.a. PREDICTED: maspardin-like [Cicer arietinum] gi|502175950|ref|XP_004515771.1| chr0 7507487 7512686 +
2 domain predictions
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Lj0g3v0042269.1
n.a. hydrolase, alpha/beta fold family protein [Solanum demissum] gi|48209969|gb|AAT40532.1| chr0 13889735 13890137 -
2 domain predictions
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Lj0g3v0043039.1
n.a. TPA: protein usf [Zea mays] gi|414881964|tpg|DAA59095.1| chr0 14128291 14132914 +
2 domain predictions
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Lj0g3v0043039.2
n.a. PREDICTED: protein usf-like [Glycine max] gi|356517659|ref|XP_003527504.1| chr0 14128291 14133972 +
2 domain predictions
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Lj0g3v0043049.1
n.a. PREDICTED: protein usf-like [Fragaria vesca subsp]. vesca] gi|470103051|ref|XP_004287959.1| chr0 14135202 14137759 -
2 domain predictions
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Lj0g3v0043829.1
n.a. PREDICTED: polyneuridine-aldehyde esterase-like [Glycine max] gi|356520748|ref|XP_003529022.1| chr0 14407815 14413503 -
2 domain predictions
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Lj0g3v0047159.1
n.a. PREDICTED: GDSL esterase/lipase At4g10955-like [Glycine max] gi|356495719|ref|XP_003516721.1| chr0 15720464 15722111 +
2 domain predictions
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Lj0g3v0055109.1
n.a. PREDICTED: pollen-specific protein SF21-like [Glycine max] gi|356535159|ref|XP_003536116.1| chr0 17755061 17758598 -
2 domain predictions
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Lj0g3v0055849.1
n.a. PREDICTED: phospholipase A1-Ibeta2, chloroplastic-like [Cicer arietinum] gi|502152496|ref|XP_004508952.1| chr0 18122643 18124620 +
2 domain predictions
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Lj0g3v0058509.1
n.a. n.a. chr0 19266570 19270244 +
2 domain predictions
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Lj0g3v0058519.1
n.a. GDSL esterase/lipase [Medicago truncatula] gi|357494243|ref|XP_003617410.1| chr0 19266570 19271384 -
2 domain predictions
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Lj0g3v0058589.1
n.a. PREDICTED: GDSL esterase/lipase At4g10955-like [Glycine max] gi|356499350|ref|XP_003518504.1| chr0 19282682 19285177 -
2 domain predictions
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Lj0g3v0059429.1
n.a. PREDICTED: bifunctional epoxide hydrolase 2-like [Cicer arietinum] gi|502153382|ref|XP_004509321.1| chr0 19659684 19660579 +
2 domain predictions
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Lj0g3v0063309.2
n.a. Alpha/beta-Hydrolases superfamily protein [Theobroma cacao] gi|508713596|gb|EOY05493.1| chr0 21450336 21453380 -
2 domain predictions
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Lj0g3v0065229.1
n.a. Monoglyceride lipase [Medicago truncatula] gi|357443267|ref|XP_003591911.1| chr0 22669837 22671239 +
2 domain predictions
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Lj0g3v0067699.1
n.a. Epoxide hydrolase [Medicago truncatula] gi|357504133|ref|XP_003622355.1| chr0 24081488 24084359 +
2 domain predictions
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Lj0g3v0067699.2
n.a. Epoxide hydrolase [Medicago truncatula] gi|357504133|ref|XP_003622355.1| chr0 24081488 24084359 +
2 domain predictions
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Lj0g3v0067709.1
n.a. Epoxide hydrolase [Medicago truncatula] gi|357504133|ref|XP_003622355.1| chr0 24084411 24084643 +
2 domain predictions
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Lj0g3v0076219.1
n.a. PREDICTED: protein usf-like [Glycine max] gi|356517659|ref|XP_003527504.1| chr0 29019768 29021636 +
2 domain predictions
 –
Lj0g3v0076219.2
n.a. PREDICTED: protein usf-like [Glycine max] gi|356517659|ref|XP_003527504.1| chr0 29019768 29021636 +
2 domain predictions
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Lj0g3v0078269.1
n.a. PREDICTED: probable carboxylesterase 18-like [Glycine max] gi|356559969|ref|XP_003548268.1| chr0 30107573 30109019 -
2 domain predictions
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Lj0g3v0081999.1
n.a. PREDICTED: serine carboxypeptidase II-2-like [Cicer arietinum] gi|502087679|ref|XP_004488608.1| chr0 32139323 32144003 -
2 domain predictions
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Lj0g3v0081999.2
n.a. PREDICTED: serine carboxypeptidase II-2-like [Cicer arietinum] gi|502087679|ref|XP_004488608.1| chr0 32139916 32144003 -
2 domain predictions
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Lj0g3v0086819.1
n.a. PREDICTED: probable strigolactone esterase DAD2-like [Cicer arietinum] gi|502125618|ref|XP_004498996.1| chr0 35098811 35099080 +
2 domain predictions
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Lj0g3v0089829.1
n.a. PREDICTED: haloalkane dehalogenase-like isoform X1 [Cicer arietinum] gi|502147891|ref|XP_004506956.1| chr0 36928509 36932780 -
2 domain predictions
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Lj0g3v0090599.1
n.a. PREDICTED: serine carboxypeptidase-like 20-like [Cicer arietinum] gi|502155835|ref|XP_004510209.1| chr0 37373089 37378247 -
2 domain predictions
 –
Lj0g3v0093059.1
n.a. PREDICTED: serine carboxypeptidase-like 50-like [Glycine max] gi|356519762|ref|XP_003528538.1| chr0 38878300 38878971 -
2 domain predictions
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Lj0g3v0093099.1
n.a. PREDICTED: serine carboxypeptidase-like 50-like [Cicer arietinum] gi|502143234|ref|XP_004505268.1| chr0 38879157 38880189 -
2 domain predictions
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Lj0g3v0094119.1
n.a. PREDICTED: probable carboxylesterase 1-like [Cicer arietinum] gi|502178720|ref|XP_004516320.1| chr0 39518879 39520394 +
2 domain predictions
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Lj0g3v0103249.1
n.a. PREDICTED: serine carboxypeptidase-like 49-like isoform 1 [Glycine max] gi|356534720|ref|XP_003535900.1| chr0 44023162 44040903 +
2 domain predictions
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Lj0g3v0105729.1
n.a. PREDICTED: serine carboxypeptidase-like 48-like isoform X2 [Cicer arietinum] gi|502145515|ref|XP_004506061.1| chr0 45432267 45434721 +
2 domain predictions
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Lj0g3v0105739.1
n.a. PREDICTED: serine carboxypeptidase-like 48-like [Glycine max] gi|356550144|ref|XP_003543449.1| chr0 45436943 45439994 +
2 domain predictions
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Lj0g3v0107429.1
n.a. Monoglyceride lipase [Medicago truncatula] gi|357496923|ref|XP_003618750.1| chr0 46341291 46346480 -
2 domain predictions
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Lj0g3v0107429.2
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356545758|ref|XP_003541302.1| chr0 46341291 46346228 -
2 domain predictions
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Lj0g3v0108279.1
n.a. PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME-like [Cicer arietinum] gi|502168643|ref|XP_004514435.1| chr0 46761964 46769513 -
2 domain predictions
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Lj0g3v0108279.2
n.a. PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME-like [Cicer arietinum] gi|502168643|ref|XP_004514435.1| chr0 46761964 46769513 -
2 domain predictions
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Lj0g3v0111429.1
n.a. Feruloyl esterase A [Medicago truncatula] gi|357437791|ref|XP_003589171.1| chr0 48393053 48398490 -
2 domain predictions
 –
Lj0g3v0111429.2
n.a. Feruloyl esterase A [Medicago truncatula] gi|357437791|ref|XP_003589171.1| chr0 48393795 48398490 -
2 domain predictions
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Lj0g3v0111429.3
n.a. Feruloyl esterase A [Medicago truncatula] gi|357437791|ref|XP_003589171.1| chr0 48393954 48398490 -
2 domain predictions
 –
Lj0g3v0112019.1
n.a. PREDICTED: epoxide hydrolase 2-like [Glycine max] gi|356502960|ref|XP_003520282.1| chr0 48674228 48676588 -
2 domain predictions
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Lj0g3v0115339.1
n.a. PREDICTED: probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1-like [Cicer arietinum] gi|502154133|ref|XP_004509595.1| chr0 50698001 50706644 +
2 domain predictions
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Lj0g3v0117039.1
n.a. Sigma factor sigB regulation protein rsbQ [Medicago truncatula] gi|357476343|ref|XP_003608457.1| chr0 51556732 51558873 +
2 domain predictions
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Lj0g3v0124969.1
n.a. PREDICTED: acylamino-acid-releasing enzyme-like [Glycine max] gi|356536605|ref|XP_003536827.1| chr0 56105245 56109353 -
2 domain predictions
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Lj0g3v0128689.1
n.a. PREDICTED: probable carboxylesterase 6-like [Glycine max] gi|356517686|ref|XP_003527517.1| chr0 58171744 58172966 +
2 domain predictions
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Lj0g3v0130359.1
n.a. PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Fragaria vesca subsp]. vesca] gi|470107121|ref|XP_004289898.1| chr0 59109336 59111072 +
2 domain predictions
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Lj0g3v0131809.1
n.a. PREDICTED: protein FAM135B-like [Glycine max] gi|356528777|ref|XP_003532974.1| chr0 60055620 60060757 +
2 domain predictions
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Lj0g3v0131809.2
n.a. PREDICTED: protein FAM135B-like [Glycine max] gi|356528777|ref|XP_003532974.1| chr0 60055620 60060757 +
2 domain predictions
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Lj0g3v0131869.1
n.a. Monoacylglycerol lipase ABHD6 [Medicago truncatula] gi|357463311|ref|XP_003601937.1| chr0 60095504 60099075 -
2 domain predictions
 –