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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • G3DSA:3.40.50.2000
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 551 results. Now displaying 1 of 12 with 50 rows per page. This search has taken 0.204s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0006839.1
n.a. PREDICTED: UDP-glycosyltransferase 74E2-like [Glycine max] gi|356559587|ref|XP_003548080.1| chr0 2623243 2625571 +
1 domain prediction
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Lj0g3v0011269.1
n.a. PREDICTED: zeatin O-glucosyltransferase-like [Glycine max] gi|356504765|ref|XP_003521165.1| chr0 4392616 4394287 +
1 domain prediction
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Lj0g3v0011279.1
n.a. PREDICTED: zeatin O-glucosyltransferase-like [Glycine max] gi|356500509|ref|XP_003519074.1| chr0 4394705 4395234 +
1 domain prediction
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Lj0g3v0011359.1
n.a. PREDICTED: zeatin O-glucosyltransferase-like [Glycine max] gi|356537475|ref|XP_003537252.1| chr0 4407594 4408548 +
1 domain prediction
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Lj0g3v0011369.1
n.a. RecName: Full=Zeatin O-glucosyltransferase; AltName: Full=Trans-zeatin O-beta-D-glucosyltransferasegi|4140691|gb|AAD04166.1| zeatin O-glucosyltransferase [Phaseolus lunatus] gi|6226510|sp|Q9ZSK5.1|ZOG_PHALU chr0 4408362 4408684 +
1 domain prediction
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Lj0g3v0011429.1
n.a. PREDICTED: zeatin O-glucosyltransferase-like [Cicer arietinum] gi|502123235|ref|XP_004498042.1| chr0 4422691 4424112 +
1 domain prediction
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Lj0g3v0024249.1
n.a. PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP]-forming] gi|356554722|ref|XP_003545692.1| chr0 9671623 9690715 -
1 domain prediction
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Lj0g3v0024249.2
n.a. PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP]-forming] gi|356554722|ref|XP_003545692.1| chr0 9671623 9690715 -
1 domain prediction
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Lj0g3v0037029.1
n.a. glycosyltransferase GT18P15 [Pueraria montana var]. lobata] gi|319759272|gb|ADV71372.1| chr0 11923270 11925363 -
1 domain prediction
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Lj0g3v0042069.1
n.a. PREDICTED: UDP-glycosyltransferase 89B1-like [Cicer arietinum] gi|502155174|ref|XP_004509983.1| chr0 13834547 13835916 +
1 domain prediction
 –
Lj0g3v0043719.1
n.a. n.a. chr0 14352971 14355761 +
1 domain prediction
 –
Lj0g3v0057799.1
n.a. PREDICTED: proteasome-activating nucleotidase-like [Glycine max] gi|356564312|ref|XP_003550399.1| chr0 18981887 18984763 -
1 domain prediction
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Lj0g3v0058449.1
n.a. PREDICTED: probable sucrose-phosphate synthase 2-like [Glycine max] gi|356553609|ref|XP_003545147.1| chr0 19228836 19236192 -
1 domain prediction
 –
Lj0g3v0067039.1
n.a. (iso)flavonoid glycosyltransferase [Medicago truncatula] gi|115334821|gb|ABI94026.1| chr0 23709553 23711493 +
1 domain prediction
 –
Lj0g3v0080599.1
n.a. sterol glucosyltransferase 1 [Lotus japonicus] gi|371753857|gb|AEX55299.1| chr0 31255522 31256630 -
1 domain prediction
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Lj0g3v0081389.1
n.a. PREDICTED: UDP-sugar-dependent glycosyltransferase 52-like isoform X2 [Cicer arietinum] gi|502118968|ref|XP_004496461.1| chr0 31806859 31808946 -
1 domain prediction
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Lj0g3v0081409.1
n.a. PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP]-forming] gi|502154799|ref|XP_004509840.1| chr0 31814321 31819651 -
1 domain prediction
 –
Lj0g3v0086839.1
n.a. PREDICTED: UDP-glycosyltransferase 74E2-like [Glycine max] gi|356559587|ref|XP_003548080.1| chr0 35123085 35124468 -
1 domain prediction
 –
Lj0g3v0088989.1
n.a. PREDICTED: UDP-glycosyltransferase 71D1-like [Cicer arietinum] gi|502095988|ref|XP_004490589.1| chr0 36443874 36448074 +
1 domain prediction
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Lj0g3v0095449.1
n.a. PREDICTED: UDP-glycosyltransferase 89B1-like [Cicer arietinum] gi|502155174|ref|XP_004509983.1| chr0 40187675 40189045 -
1 domain prediction
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Lj0g3v0102849.1
n.a. Cytokinin-O-glucosyltransferase [Medicago truncatula] gi|357443907|ref|XP_003592231.1| chr0 43770832 43778666 +
1 domain prediction
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Lj0g3v0109409.1
n.a. PREDICTED: UDP-glycosyltransferase 89B1-like [Cicer arietinum] gi|502155174|ref|XP_004509983.1| chr0 47377486 47379242 +
1 domain prediction
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Lj0g3v0110479.1
n.a. PREDICTED: UDP-glycosyltransferase 71D1-like [Cicer arietinum] gi|502095988|ref|XP_004490589.1| chr0 47889197 47891062 +
1 domain prediction
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Lj0g3v0118899.1
n.a. PREDICTED: UDP-glycosyltransferase 85A3-like, partial [Cicer arietinum] gi|502134100|ref|XP_004502000.1| chr0 52567895 52571597 +
1 domain prediction
 –
Lj0g3v0121639.1
n.a. Cytokinin-O-glucosyltransferase [Medicago truncatula] gi|357489701|ref|XP_003615138.1| chr0 54284158 54285024 +
1 domain prediction
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Lj0g3v0121779.1
n.a. Glucosyltransferase [Medicago truncatula] gi|357474493|ref|XP_003607531.1| chr0 54362934 54364319 +
1 domain prediction
 –
Lj0g3v0124399.1
n.a. PREDICTED: UDP-glycosyltransferase 74E2-like [Glycine max] gi|356559587|ref|XP_003548080.1| chr0 55883203 55885981 -
1 domain prediction
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Lj0g3v0125139.1
n.a. Cytokinin-O-glucosyltransferase [Medicago truncatula] gi|357496709|ref|XP_003618643.1| chr0 56167999 56169667 -
1 domain prediction
 –
Lj0g3v0128059.1
n.a. PREDICTED: anthocyanidin 3-O-glucosyltransferase 5-like [Glycine max] gi|356506424|ref|XP_003521983.1| chr0 57812373 57815670 +
1 domain prediction
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Lj0g3v0128489.1
n.a. UDP-glucosyltransferase [Medicago truncatula] gi|357500579|ref|XP_003620578.1| chr0 58035546 58038447 -
1 domain prediction
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Lj0g3v0131399.1
n.a. PREDICTED: UDP-glycosyltransferase 85A3-like [Glycine max] gi|356500366|ref|XP_003519003.1| chr0 59771447 59772893 -
1 domain prediction
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Lj0g3v0132189.1
n.a. PREDICTED: UDP-sugar-dependent glycosyltransferase 52-like [Glycine max] gi|356499534|ref|XP_003518594.1| chr0 60293324 60297610 +
1 domain prediction
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Lj0g3v0136929.1
n.a. PREDICTED: anthocyanidin 3-O-glucosyltransferase 5-like [Glycine max] gi|356517124|ref|XP_003527240.1| chr0 62867446 62868862 +
1 domain prediction
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Lj0g3v0139239.1
n.a. RecName: Full=Zeatin O-glucosyltransferase; AltName: Full=Trans-zeatin O-beta-D-glucosyltransferasegi|4140691|gb|AAD04166.1| zeatin O-glucosyltransferase [Phaseolus lunatus] gi|6226510|sp|Q9ZSK5.1|ZOG_PHALU chr0 63742041 63743906 +
1 domain prediction
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Lj0g3v0140249.1
n.a. PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP]-forming] gi|356516692|ref|XP_003527027.1| chr0 64406952 64413330 +
1 domain prediction
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Lj0g3v0158089.1
n.a. UDP-glucuronosyl/UDP-glucosyltransferase [Medicago truncatula] gi|124361013|gb|ABN08985.1| chr0 74046868 74047538 -
1 domain prediction
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Lj0g3v0158149.1
n.a. PREDICTED: UDP-glycosyltransferase 74F1-like [Glycine max] gi|356572896|ref|XP_003554601.1| chr0 74053975 74054639 -
1 domain prediction
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Lj0g3v0168699.1
n.a. UDP-glucose glucosyltransferase [Medicago truncatula] gi|357494123|ref|XP_003617350.1| chr0 80557343 80558686 -
1 domain prediction
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Lj0g3v0171009.1
n.a. PREDICTED: UDP-glycosyltransferase 79B6-like [Glycine max] gi|356542996|ref|XP_003539949.1| chr0 81859375 81862232 +
1 domain prediction
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Lj0g3v0172459.1
n.a. PREDICTED: zeatin O-glucosyltransferase-like [Glycine max] gi|356504765|ref|XP_003521165.1| chr0 82867969 82869351 -
1 domain prediction
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Lj0g3v0185919.1
n.a. Glucosyltransferase [Medicago truncatula] gi|357474493|ref|XP_003607531.1| chr0 90598687 90599727 +
1 domain prediction
 –
Lj0g3v0193249.1
n.a. Cytokinin-O-glucosyltransferase [Medicago truncatula] gi|357443907|ref|XP_003592231.1| chr0 94446198 94450694 +
1 domain prediction
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Lj0g3v0206149.1
n.a. sterol glucosyltransferase 1 [Lotus japonicus] gi|371753857|gb|AEX55299.1| chr0 102672304 102681122 -
1 domain prediction
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Lj0g3v0206149.2
n.a. sterol glucosyltransferase 1 [Lotus japonicus] gi|371753857|gb|AEX55299.1| chr0 102672304 102681122 -
1 domain prediction
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Lj0g3v0214199.1
n.a. PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP]-forming] gi|356544138|ref|XP_003540512.1| chr0 108403033 108415665 +
1 domain prediction
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Lj0g3v0214199.2
n.a. PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP]-forming] gi|356544138|ref|XP_003540512.1| chr0 108408767 108412456 +
1 domain prediction
 –
Lj0g3v0214389.1
n.a. PREDICTED: hydroquinone glucosyltransferase-like [Glycine max] gi|356527181|ref|XP_003532191.1| chr0 108609119 108611015 -
1 domain prediction
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Lj0g3v0219149.1
n.a. PREDICTED: zeatin O-glucosyltransferase-like [Glycine max] gi|356537475|ref|XP_003537252.1| chr0 111887211 111888294 -
1 domain prediction
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Lj0g3v0227149.1
n.a. PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Glycine max] gi|356559718|ref|XP_003548144.1| chr0 117365477 117366494 -
1 domain prediction
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Lj0g3v0236039.1
n.a. Anthocyanidin 3-O-glucosyltransferase [Medicago truncatula] gi|357515699|ref|XP_003628138.1| chr0 122324819 122326346 +
1 domain prediction
 –