Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR017441
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 1896 results. Now displaying 1 of 38 with 50 rows per page. This search has taken 6.138s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3023720.1
LjKlavier leucine-rich repeat receptor-like kinase [Lotus japonicus] gi|353677868|dbj|BAL04590.1| chr1 34474974 34479067 +
2 domain predictions
1 GO term
Lj2g3v1467920.1
LjSymRK receptor-like kinase SYMRK [Lotus japonicus] gi|21622628|gb|AAM67418.1|AF492655_1 chr2 23244149 23250251 -
2 domain predictions
1 GO term
Lj2g3v2904690.1
LjNfr1 Nod-factor receptor 1b [Lotus japonicus] gi|37651060|emb|CAE02590.1| chr2 37916948 37922957 +
2 domain predictions
1 GO term
Lj3g3v1739280.1
LjCCaMK RecName: Full=Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase; Short=LjCCaMKgi|116634228|emb|CAJ76699.1| calcium calmodulin-dependent protein kinase [Lotus japonicus] gi|122250440|sp|A0AAR7.1|CCAMK_LOTJA chr3 21980800 21987089 +
2 domain predictions
1 GO term
Lj0g3v0001859.1
n.a. Receptor kinase [Medicago truncatula] gi|357501751|ref|XP_003621164.1| chr0 548278 551234 +
2 domain predictions
1 GO term
Lj0g3v0010069.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr0 4105156 4105460 -
2 domain predictions
1 GO term
Lj0g3v0014239.1
n.a. PREDICTED: serine/threonine-protein kinase CBK1-like [Glycine max] gi|356545884|ref|XP_003541363.1| chr0 5444221 5447256 -
2 domain predictions
1 GO term
Lj0g3v0019539.1
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like isoform X2 [Cicer arietinum] gi|502083819|ref|XP_004487574.1| chr0 7745945 7749305 -
2 domain predictions
1 GO term
Lj0g3v0022049.1
n.a. NAK-type protein kinase precursor [Glycine max] gi|351727489|ref|NP_001238698.1| chr0 8903111 8905216 +
2 domain predictions
1 GO term
Lj0g3v0023009.1
n.a. Transmembrane kinase 1 isoform 2 [Theobroma cacao] gi|508711195|gb|EOY03092.1| chr0 9216087 9217700 +
2 domain predictions
1 GO term
Lj0g3v0024809.1
n.a. PREDICTED: serine/threonine-protein kinase EDR1-like isoform X1 [Cicer arietinum] gi|502143842|ref|XP_004505487.1| chr0 9870862 9892442 -
2 domain predictions
1 GO term
Lj0g3v0038859.1
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Glycine max] gi|356509460|ref|XP_003523467.1| chr0 12655520 12663549 +
2 domain predictions
1 GO term
Lj0g3v0043799.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA-like [Glycine max] gi|356541594|ref|XP_003539259.1| chr0 14384170 14387274 -
2 domain predictions
1 GO term
Lj0g3v0048319.1
n.a. phosphoenolpyruvate carboxylase-related kinase 1 [Caragana korshinskii] gi|477382160|gb|AGI78245.1| chr0 16274390 16277916 +
2 domain predictions
1 GO term
Lj0g3v0050299.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710-like [Glycine max] gi|356527105|ref|XP_003532154.1| chr0 17090362 17095739 +
2 domain predictions
1 GO term
Lj0g3v0058439.1
n.a. PREDICTED: probable receptor-like protein kinase At2g42960-like [Glycine max] gi|356501467|ref|XP_003519546.1| chr0 19220972 19225538 -
2 domain predictions
1 GO term
Lj0g3v0059919.1
n.a. PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Cicer arietinum] gi|502082392|ref|XP_004487152.1| chr0 19889238 19906617 -
2 domain predictions
1 GO term
Lj0g3v0061859.1
n.a. PREDICTED: probable receptor-like protein kinase At5g47070-like [Cicer arietinum] gi|502152552|ref|XP_004508979.1| chr0 20771290 20775478 +
2 domain predictions
1 GO term
Lj0g3v0063939.1
n.a. PREDICTED: serine/threonine-protein kinase TIO-like [Cicer arietinum] gi|502164656|ref|XP_004513201.1| chr0 21855100 21857616 +
2 domain predictions
1 GO term
Lj0g3v0065639.2
n.a. PREDICTED: somatic embryogenesis receptor kinase 1-like [Glycine max] gi|356576127|ref|XP_003556185.1| chr0 22860880 22867426 -
2 domain predictions
1 GO term
Lj0g3v0067549.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Glycine max] gi|356516754|ref|XP_003527058.1| chr0 23998624 24003883 -
2 domain predictions
1 GO term
Lj0g3v0067549.2
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Glycine max] gi|356516754|ref|XP_003527058.1| chr0 23998624 24003883 -
2 domain predictions
1 GO term
Lj0g3v0067559.1
n.a. serine-threonine kinase [Phaseolus vulgaris] gi|38194928|gb|AAR13316.1| chr0 24006458 24007050 +
2 domain predictions
1 GO term
Lj0g3v0067799.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356575773|ref|XP_003556011.1| chr0 24129425 24131578 -
2 domain predictions
1 GO term
Lj0g3v0067799.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356575773|ref|XP_003556011.1| chr0 24129425 24131578 -
2 domain predictions
1 GO term
Lj0g3v0067829.1
n.a. PREDICTED: serine/threonine-protein kinase SAPK3-like [Cicer arietinum] gi|502152528|ref|XP_004508967.1| chr0 24148142 24151680 +
2 domain predictions
1 GO term
Lj0g3v0067889.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK1-like [Glycine max] gi|356521887|ref|XP_003529582.1| chr0 24185210 24190043 +
2 domain predictions
1 GO term
Lj0g3v0072519.1
n.a. PREDICTED: protein kinase APK1B, chloroplastic-like [Glycine max] gi|356506672|ref|XP_003522100.1| chr0 26909470 26914375 -
2 domain predictions
1 GO term
Lj0g3v0072749.1
n.a. PREDICTED: CBL-interacting serine/threonine-protein kinase 10-like isoform X1 [Cicer arietinum] gi|502129560|ref|XP_004500345.1| chr0 27105006 27107757 +
2 domain predictions
1 GO term
Lj0g3v0073509.1
n.a. Shaggy-related protein kinase [Medicago truncatula] gi|357452871|ref|XP_003596712.1| chr0 27591478 27594395 -
2 domain predictions
1 GO term
Lj0g3v0073629.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.5-like [Glycine max] gi|356498420|ref|XP_003518050.1| chr0 27656698 27659079 +
2 domain predictions
1 GO term
Lj0g3v0073739.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max] gi|356541852|ref|XP_003539386.1| chr0 27722307 27727642 +
2 domain predictions
1 GO term
Lj0g3v0073739.2
n.a. PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max] gi|356541852|ref|XP_003539386.1| chr0 27722307 27727642 +
2 domain predictions
1 GO term
Lj0g3v0075369.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502135214|ref|XP_004502257.1| chr0 28565917 28573472 +
2 domain predictions
1 GO term
Lj0g3v0075699.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|358346449|ref|XP_003637280.1| chr0 28803126 28805909 +
2 domain predictions
1 GO term
Lj0g3v0076929.1
n.a. Serine-threonine protein kinase [Medicago truncatula] gi|357489739|ref|XP_003615157.1| chr0 29414572 29418155 -
2 domain predictions
1 GO term
Lj0g3v0082369.1
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase 3-like [Glycine max] gi|356514005|ref|XP_003525698.1| chr0 32335129 32339897 -
2 domain predictions
1 GO term
Lj0g3v0083059.1
n.a. Ser/Thr protein kinase [Lotus japonicus] gi|62857012|dbj|BAD95891.1| chr0 32749920 32755086 -
2 domain predictions
1 GO term
Lj0g3v0083519.1
n.a. PREDICTED: probable receptor-like protein kinase At5g15080-like [Cicer arietinum] gi|502155065|ref|XP_004509947.1| chr0 33105730 33108989 +
2 domain predictions
1 GO term
Lj0g3v0084889.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK12-like [Glycine max] gi|356524047|ref|XP_003530644.1| chr0 33875098 33875616 +
2 domain predictions
1 GO term
Lj0g3v0088019.1
n.a. Lectin receptor-like kinase Tg-20 [Medicago truncatula] gi|357517167|ref|XP_003628872.1| chr0 35898490 35900862 -
2 domain predictions
1 GO term
Lj0g3v0090399.1
n.a. Protein kinase-like protein [Medicago truncatula] gi|357491539|ref|XP_003616057.1| chr0 37230407 37231665 +
2 domain predictions
1 GO term
Lj0g3v0092609.1
n.a. PREDICTED: cyclin-dependent kinase F-4-like [Glycine max] gi|356496445|ref|XP_003517078.1| chr0 38620295 38626809 -
2 domain predictions
1 GO term
Lj0g3v0092609.2
n.a. PREDICTED: cyclin-dependent kinase F-4-like [Glycine max] gi|356496445|ref|XP_003517078.1| chr0 38620295 38626809 -
2 domain predictions
1 GO term
Lj0g3v0092609.3
n.a. PREDICTED: cyclin-dependent kinase F-4-like [Glycine max] gi|356496445|ref|XP_003517078.1| chr0 38620295 38626809 -
2 domain predictions
1 GO term
Lj0g3v0093489.2
n.a. PREDICTED: CBL-interacting protein kinase 2-like isoform 1 [Glycine max] gi|356540038|ref|XP_003538498.1| chr0 39162657 39166006 -
2 domain predictions
1 GO term
Lj0g3v0095039.1
n.a. PREDICTED: PTI1-like tyrosine-protein kinase At3g15890-like [Glycine max] gi|356529320|ref|XP_003533243.1| chr0 40015742 40017467 +
2 domain predictions
1 GO term
Lj0g3v0095039.2
n.a. PREDICTED: PTI1-like tyrosine-protein kinase At3g15890-like [Glycine max] gi|356529320|ref|XP_003533243.1| chr0 40015742 40017467 +
2 domain predictions
1 GO term
Lj0g3v0096479.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358347873|ref|XP_003637975.1| chr0 40687117 40695302 +
2 domain predictions
1 GO term
Lj0g3v0096879.1
n.a. PREDICTED: casein kinase I isoform delta-like [Brachypodium distachyon] gi|357136122|ref|XP_003569655.1| chr0 40890960 40892300 +
2 domain predictions
1 GO term