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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PF08240
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 111 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 0.027s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0023479.1
n.a. PREDICTED: probable trans-2-enoyl-CoA reductase, mitochondrial-like isoform X1 [Cicer arietinum] gi|502082078|ref|XP_004487059.1| chr0 9375308 9378821 -
2 domain predictions
1 GO term
Lj0g3v0062349.1
n.a. PREDICTED: alcohol dehydrogenase-like 7-like [Cicer arietinum] gi|502134046|ref|XP_004501981.1| chr0 20929439 20945266 -
2 domain predictions
1 GO term
Lj0g3v0062349.2
n.a. PREDICTED: alcohol dehydrogenase-like 7-like [Cicer arietinum] gi|502134046|ref|XP_004501981.1| chr0 20946633 20950022 -
2 domain predictions
1 GO term
Lj0g3v0071329.1
n.a. PREDICTED: alcohol dehydrogenase class-3-like [Cicer arietinum] gi|502114773|ref|XP_004495047.1| chr0 26112440 26116661 -
2 domain predictions
1 GO term
Lj0g3v0149379.1
n.a. alcohol dehydrogenase family-1 [Oryza coarctata] gi|240252444|gb|ACS49642.1| chr0 69287572 69292662 +
2 domain predictions
1 GO term
Lj0g3v0210839.1
n.a. PREDICTED: reticulon-4-interacting protein 1, mitochondrial-like [Glycine max] gi|356544066|ref|XP_003540476.1| chr0 106078139 106083805 +
2 domain predictions
1 GO term
Lj0g3v0339299.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max] gi|356526809|ref|XP_003532009.1| chr0 177718250 177721557 -
2 domain predictions
1 GO term
Lj1g3v0913270.1
n.a. alcohol dehydrogenase [Lotus japonicus] gi|356582742|gb|AET21261.1| chr1 11649553 11652641 +
2 domain predictions
1 GO term
Lj1g3v0913280.1
n.a. alcohol dehydrogenase [Lotus japonicus] gi|356582742|gb|AET21261.1| chr1 11650117 11652706 +
2 domain predictions
1 GO term
Lj1g3v1112850.1
n.a. PREDICTED: quinone oxidoreductase-like protein 2 homolog [Glycine max] gi|356509112|ref|XP_003523296.1| chr1 13927776 13931476 +
2 domain predictions
1 GO term
Lj1g3v2315430.1
n.a. PREDICTED: alcohol dehydrogenase-like 3-like isoform X1 [Cicer arietinum] gi|502104095|ref|XP_004492437.1| chr1 27394314 27405955 +
2 domain predictions
1 GO term
Lj1g3v3580590.2
n.a. Quinone-oxidoreductase-like protein [Medicago truncatula] gi|357505171|ref|XP_003622874.1| chr1 41109997 41114047 +
2 domain predictions
1 GO term
Lj1g3v3641800.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max] gi|356571369|ref|XP_003553850.1| chr1 41841020 41841859 +
2 domain predictions
1 GO term
Lj1g3v3641840.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cicer arietinum] gi|502173904|ref|XP_004515401.1| chr1 41846105 41849379 +
2 domain predictions
1 GO term
Lj1g3v3641870.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max] gi|356571378|ref|XP_003553854.1| chr1 41860010 41861299 +
2 domain predictions
1 GO term
Lj1g3v3979340.1
n.a. Alcohol dehydrogenase class-3 [Medicago truncatula] gi|357487763|ref|XP_003614169.1| chr1 47284995 47287627 -
2 domain predictions
1 GO term
Lj1g3v4528570.1
n.a. PREDICTED: alcohol dehydrogenase class-3-like [Cicer arietinum] gi|502110273|ref|XP_004493841.1| chr1 53412429 53415790 -
2 domain predictions
1 GO term
Lj2g3v0549950.1
n.a. PREDICTED: L-idonate 5-dehydrogenase-like [Glycine max] gi|356559880|ref|XP_003548224.1| chr2 7359048 7359813 +
2 domain predictions
1 GO term
Lj2g3v0561220.1
n.a. PREDICTED: alcohol dehydrogenase-like 6-like [Glycine max] gi|356531015|ref|XP_003534074.1| chr2 7515642 7536185 +
2 domain predictions
1 GO term
Lj2g3v0561220.2
n.a. PREDICTED: alcohol dehydrogenase-like 6-like [Glycine max] gi|356531015|ref|XP_003534074.1| chr2 7515642 7525283 +
2 domain predictions
1 GO term
Lj2g3v1014110.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cicer arietinum] gi|502090613|ref|XP_004489284.1| chr2 15469697 15471403 +
2 domain predictions
1 GO term
Lj2g3v1467620.1
n.a. Mannitol dehydrogenase [Medicago truncatula] gi|357485383|ref|XP_003612979.1| chr2 23113957 23115885 -
2 domain predictions
1 GO term
Lj2g3v1467620.2
n.a. Cinnamyl alcohol dehydrogenase [Medicago truncatula] gi|357485403|ref|XP_003612989.1| chr2 23113957 23115066 -
2 domain predictions
1 GO term
Lj2g3v1467630.1
n.a. PREDICTED: probable mannitol dehydrogenase-like [Cicer arietinum] gi|502162632|ref|XP_004512563.1| chr2 23119243 23121973 +
2 domain predictions
1 GO term
Lj2g3v1467630.2
n.a. Geraniol dehydrogenase 1 [Theobroma cacao] gi|508699991|gb|EOX91887.1| chr2 23119610 23121973 +
2 domain predictions
1 GO term
Lj2g3v2970670.1
n.a. PREDICTED: alcohol dehydrogenase-like 7-like isoform 1 [Glycine max] gi|356554319|ref|XP_003545495.1| chr2 38374527 38380339 -
2 domain predictions
1 GO term
Lj3g3v0463530.1
n.a. PREDICTED: quinone oxidoreductase 1-like [Glycine max] gi|356544208|ref|XP_003540546.1| chr3 5302913 5305882 +
2 domain predictions
1 GO term
Lj3g3v0463550.1
n.a. PREDICTED: quinone oxidoreductase 1-like [Glycine max] gi|356544208|ref|XP_003540546.1| chr3 5310474 5311759 +
2 domain predictions
1 GO term
Lj3g3v0615870.1
n.a. Quinone-oxidoreductase-like protein [Medicago truncatula] gi|357470795|ref|XP_003605682.1| chr3 6634693 6638828 -
2 domain predictions
1 GO term
Lj3g3v0615870.3
n.a. Quinone-oxidoreductase-like protein [Medicago truncatula] gi|357470795|ref|XP_003605682.1| chr3 6637807 6638828 -
2 domain predictions
1 GO term
Lj3g3v3639170.1
n.a. alcohol dehydrogenase-like [Glycine max] gi|367460047|ref|NP_001238395.2| chr3 43977518 43993037 -
2 domain predictions
1 GO term
Lj3g3v3639170.2
n.a. PREDICTED: LOW QUALITY PROTEIN: alcohol dehydrogenase-like 2-like [Glycine max] gi|356543237|ref|XP_003540069.1| chr3 43977518 43980063 -
2 domain predictions
1 GO term
Lj3g3v3639170.3
n.a. alcohol dehydrogenase-like [Glycine max] gi|367460047|ref|NP_001238395.2| chr3 43990407 43993006 -
2 domain predictions
1 GO term
Lj3g3v3753340.2
n.a. Quinone-oxidoreductase-like protein [Medicago truncatula] gi|357470785|ref|XP_003605677.1| chr3 45475577 45477896 +
2 domain predictions
1 GO term
Lj4g3v0408340.1
n.a. PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like [Glycine max] gi|356554814|ref|XP_003545737.1| chr4 5131059 5133978 -
2 domain predictions
1 GO term
Lj4g3v0585740.1
n.a. 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula] gi|357475423|ref|XP_003607997.1| chr4 9241274 9257776 -
2 domain predictions
1 GO term
Lj4g3v0585740.2
n.a. 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula] gi|357475423|ref|XP_003607997.1| chr4 9244735 9257776 -
2 domain predictions
1 GO term
Lj4g3v2775530.1
n.a. RecName: Full=Probable mannitol dehydrogenase; AltName: Full=NAD-dependent mannitol dehydrogenasegi|17028156|gb|AAL34328.1|L46856_1 cinnamyl-alcohol dehydrogenase [Medicago sativa] gi|10720088|sp|O82515.1|MTDH_MEDSA chr4 37145520 37149586 +
2 domain predictions
1 GO term
Lj4g3v2846380.1
n.a. PREDICTED: succinate-semialdehyde dehydrogenase (acetylating)-like [Cicer arietinum] gi|502139713|ref|XP_004503868.1| chr4 38159426 38164258 -
2 domain predictions
1 GO term
Lj5g3v0243290.1
n.a. PREDICTED: probable cinnamyl alcohol dehydrogenase 6-like [Cicer arietinum] gi|502126421|ref|XP_004499301.1| chr5 2026536 2029167 +
2 domain predictions
1 GO term
Lj5g3v0642800.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cicer arietinum] gi|502173904|ref|XP_004515401.1| chr5 8897500 8904296 +
2 domain predictions
1 GO term
Lj5g3v2113360.1
n.a. PREDICTED: probable cinnamyl alcohol dehydrogenase-like [Glycine max] gi|356575670|ref|XP_003555961.1| chr5 30404558 30406113 +
2 domain predictions
1 GO term
Lj5g3v2113360.2
n.a. PREDICTED: probable cinnamyl alcohol dehydrogenase-like [Glycine max] gi|356575670|ref|XP_003555961.1| chr5 30404648 30405452 +
2 domain predictions
1 GO term
Lj6g3v0857970.1
n.a. PREDICTED: quinone oxidoreductase 1-like [Glycine max] gi|356544208|ref|XP_003540546.1| chr6 8603837 8607028 -
2 domain predictions
1 GO term
Lj6g3v2079240.1
n.a. PREDICTED: quinone oxidoreductase PIG3-like [Cicer arietinum] gi|502077683|ref|XP_004485715.1| chr6 24453796 24456717 +
2 domain predictions
1 GO term
Lj6g3v2192190.1
n.a. PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like [Glycine max] gi|356549501|ref|XP_003543132.1| chr6 25270461 25273645 +
2 domain predictions
1 GO term
LotjaGi1g1v0057200.1
n.a. Alcohol dehydrogenase, putative; TAIR: AT5G42250.1 Zinc-binding alcohol dehydrogenase family protein; Swiss-Prot: sp|Q9FH04|ADHL7_ARATH Alcohol dehydrogenase-like 7; TrEMBL-Plants: tr|I1M7A9|I1M7A9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0057200 LjG1.1_chr1 7980598 7987424 +
2 domain predictions
1 GO term
LotjaGi1g1v0057200.2
n.a. Alcohol dehydrogenase, putative; TAIR: AT5G42250.1 Zinc-binding alcohol dehydrogenase family protein; Swiss-Prot: sp|Q9FH04|ADHL7_ARATH Alcohol dehydrogenase-like 7; TrEMBL-Plants: tr|I1M7A9|I1M7A9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0057200 LjG1.1_chr1 7981134 7984012 +
2 domain predictions
1 GO term
LotjaGi1g1v0162500.1
n.a. Alcohol dehydrogenase; TAIR: AT1G77120.1 alcohol dehydrogenase 1; Swiss-Prot: sp|P13603|ADH1_TRIRP Alcohol dehydrogenase 1; TrEMBL-Plants: tr|A0A1J7HUZ4|A0A1J7HUZ4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0162500 LjG1.1_chr1 30545091 30548648 +
2 domain predictions
1 GO term
LotjaGi1g1v0162500.2
n.a. Alcohol dehydrogenase; TAIR: AT1G77120.1 alcohol dehydrogenase 1; Swiss-Prot: sp|P12886|ADH1_PEA Alcohol dehydrogenase 1; TrEMBL-Plants: tr|A0A1J7HUZ4|A0A1J7HUZ4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0162500 LjG1.1_chr1 30545592 30548304 +
2 domain predictions
1 GO term