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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR15204
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.015s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v1970880.1
n.a. CIP73 protein [Lotus japonicus] gi|294516726|gb|ADE96995.1| chr4 27346111 27356209 +
1 domain prediction
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Lj4g3v1970880.3
n.a. CIP73 protein [Lotus japonicus] gi|294516726|gb|ADE96995.1| chr4 27346306 27353638 +
1 domain prediction
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Lj5g3v0266930.1
n.a. PREDICTED: serine-rich adhesin for platelets-like isoform X1 [Cicer arietinum] gi|502126477|ref|XP_004499322.1| chr5 2204011 2214243 -
1 domain prediction
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Lj5g3v0266930.2
n.a. PREDICTED: serine-rich adhesin for platelets-like isoform X1 [Cicer arietinum] gi|502126477|ref|XP_004499322.1| chr5 2204011 2214243 -
1 domain prediction
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Lj6g3v1094760.1
n.a. PREDICTED: pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like [Vitis vinifera] gi|225456435|ref|XP_002280637.1| chr6 13518256 13524839 -
1 domain prediction
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LotjaGi4g1v0281900.1
n.a. Ubiquitin family protein; TAIR: AT5G25270.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q6PA26|BAG6B_XENLA Large proline-rich protein bag6-B; TrEMBL-Plants: tr|D5LXJ0|D5LXJ0_LOTJA CIP73 protein; Found in the gene: LotjaGi4g1v0281900 LjG1.1_chr4 65296786 65307466 +
1 domain prediction
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LotjaGi4g1v0281900.2
n.a. Ubiquitin family protein; TAIR: AT5G25270.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q6PA26|BAG6B_XENLA Large proline-rich protein bag6-B; TrEMBL-Plants: tr|D5LXJ0|D5LXJ0_LOTJA CIP73 protein; Found in the gene: LotjaGi4g1v0281900 LjG1.1_chr4 65298258 65307365 +
1 domain prediction
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LotjaGi5g1v0001400.1
n.a. Ubiquitin family protein; TAIR: AT5G42220.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q9Z1R2|BAG6_MOUSE Large proline-rich protein BAG6; TrEMBL-Plants: tr|I1MBZ3|I1MBZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0001400 LjG1.1_chr5 260189 271034 +
1 domain prediction
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LotjaGi5g1v0001400.2
n.a. Ubiquitin family protein; TAIR: AT5G42220.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q9Z1R2|BAG6_MOUSE Large proline-rich protein BAG6; TrEMBL-Plants: tr|I1MBZ3|I1MBZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0001400 LjG1.1_chr5 260189 271034 +
1 domain prediction
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LotjaGi6g1v0212300_LC.1
n.a. Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT5G50850.1 Transketolase family protein; Swiss-Prot: sp|Q0J0H4|ODPB2_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial; TrEMBL-Plants: tr|A0A1J7H044|A0A1J7H044_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212300_LC LjG1.1_chr6 50965567 50972770 -
1 domain prediction
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LotjaGi6g1v0212300_LC.2
n.a. Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT5G50850.1 Transketolase family protein; Swiss-Prot: sp|Q0J0H4|ODPB2_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial; TrEMBL-Plants: tr|A0A1J7H044|A0A1J7H044_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212300_LC LjG1.1_chr6 50965567 50972770 -
1 domain prediction
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LotjaGi6g1v0212300_LC.3
n.a. Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT5G50850.1 Transketolase family protein; Swiss-Prot: sp|Q0J0H4|ODPB2_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial; TrEMBL-Plants: tr|A0A1J7H044|A0A1J7H044_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212300_LC LjG1.1_chr6 50965727 50972675 -
1 domain prediction
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LotjaGi6g1v0212300_LC.4
n.a. Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT5G50850.1 Transketolase family protein; Swiss-Prot: sp|Q0J0H4|ODPB2_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial; TrEMBL-Plants: tr|A0A1J7H044|A0A1J7H044_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212300_LC LjG1.1_chr6 50966027 50972420 -
1 domain prediction
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