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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR31236:SF2
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 16 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.019s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0079869.1
n.a. PREDICTED: dehydration-responsive protein RD22 [Vitis vinifera] gi|225430045|ref|XP_002284286.1| chr0 30846699 30852989 +
1 domain prediction
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Lj0g3v0079869.3
n.a. PREDICTED: BURP domain-containing protein 3-like [Vitis vinifera] gi|225430055|ref|XP_002284380.1| chr0 30846699 30851119 +
1 domain prediction
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Lj0g3v0079879.1
n.a. RD22-like protein [Vitis vinifera] gi|54645911|gb|AAV36561.1| chr0 30851960 30852989 +
1 domain prediction
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Lj1g3v0415040.1
n.a. resistant specific protein-1(4) [Vigna radiata] gi|24416614|dbj|BAC22498.1| chr1 5111133 5112368 +
1 domain prediction
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Lj1g3v0415080.1
n.a. PREDICTED: dehydration-responsive protein RD22-like [Glycine max] gi|356508653|ref|XP_003523069.1| chr1 5128825 5130031 +
1 domain prediction
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Lj1g3v1815390.1
n.a. PREDICTED: dehydration-responsive protein RD22-like [Glycine max] gi|356508653|ref|XP_003523069.1| chr1 22030780 22031339 -
1 domain prediction
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Lj1g3v1989440.1
n.a. resistant specific protein-2 [Vigna radiata] gi|24416618|dbj|BAC22500.1| chr1 23386586 23389146 -
1 domain prediction
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Lj1g3v1989450.1
n.a. n.a. chr1 23386586 23388270 +
1 domain prediction
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Lj1g3v1989460.1
n.a. resistant specific protein-1(4) [Vigna radiata] gi|24416614|dbj|BAC22498.1| chr1 23387757 23389158 -
1 domain prediction
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Lj1g3v2036410.1
n.a. BURP domain protein precursor [Glycine max] gi|351722000|ref|NP_001235949.1| chr1 23944668 23947457 -
1 domain prediction
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Lj1g3v2036410.2
n.a. PREDICTED: dehydration-responsive protein RD22-like [Cicer arietinum] gi|502124472|ref|XP_004498543.1| chr1 23944668 23947457 -
1 domain prediction
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Lj4g3v1709680.1
n.a. resistant specific protein-2 [Vigna radiata] gi|24416618|dbj|BAC22500.1| chr4 24640945 24641688 -
1 domain prediction
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Lj5g3v0642590.1
n.a. PREDICTED: dehydration-responsive protein RD22-like [Cicer arietinum] gi|502124472|ref|XP_004498543.1| chr5 8825258 8827567 +
1 domain prediction
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Lj5g3v0642590.2
n.a. PREDICTED: dehydration-responsive protein RD22-like [Cicer arietinum] gi|502124472|ref|XP_004498543.1| chr5 8825409 8827567 +
1 domain prediction
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LotjaGi3g1v0080800.1
n.a. BURP domain protein RD22; TAIR: AT5G25610.1 BURP domain-containing protein; Swiss-Prot: sp|Q08298|RD22_ARATH BURP domain protein RD22; TrEMBL-Plants: tr|F6H2Z1|F6H2Z1_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0080800 LjG1.1_chr3 8970624 8973860 +
1 domain prediction
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LotjaGi3g1v0080800.2
n.a. BURP domain protein RD22; TAIR: AT5G25610.1 BURP domain-containing protein; Swiss-Prot: sp|Q08298|RD22_ARATH BURP domain protein RD22; TrEMBL-Plants: tr|A0A067LNK9|A0A067LNK9_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0080800 LjG1.1_chr3 8970637 8988924 +
1 domain prediction
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