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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR31350
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.020s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1267210.1
n.a. F-box only protein [Medicago truncatula] gi|357487407|ref|XP_003613991.1| chr2 20159230 20161318 +
1 domain prediction
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Lj2g3v1267210.2
n.a. uvrB/uvrC motif-containing protein [Arabidopsis thaliana] gi|42568906|ref|NP_178438.2| chr2 20159230 20162499 +
1 domain prediction
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Lj3g3v0766060.1
n.a. Uncharacterized protein TCM_045118 [Theobroma cacao] gi|508727882|gb|EOY19779.1| chr3 9145891 9152229 +
1 domain prediction
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Lj3g3v0766060.2
n.a. Uncharacterized protein TCM_045118 [Theobroma cacao] gi|508727882|gb|EOY19779.1| chr3 9148084 9152565 +
1 domain prediction
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Lj3g3v0766060.3
n.a. Uncharacterized protein TCM_045118 [Theobroma cacao] gi|508727882|gb|EOY19779.1| chr3 9149406 9152565 +
1 domain prediction
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LotjaGi2g1v0298000.1
n.a. Heat shock protein HspQ; TAIR: AT2G03390.1 uvrB/uvrC motif-containing protein; Swiss-Prot: sp|Q67Y99|CLPF_ARATH Clp protease adapter protein ClpF, chloroplastic; TrEMBL-Plants: tr|A0A151TFI2|A0A151TFI2_CAJCA F-box only protein 21; Found in the gene: LotjaGi2g1v0298000 LjG1.1_chr2 77253175 77256856 +
1 domain prediction
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LotjaGi3g1v0110100.1
n.a. Transglutaminase family protein; TAIR: AT4G19160.2 transglutaminase family protein; Swiss-Prot: sp|Q49X07|Y1546_STAS1 Uncharacterized protein SSP1546; TrEMBL-Plants: tr|A0A151R7F9|A0A151R7F9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0110100 LjG1.1_chr3 13591151 13598512 -
1 domain prediction
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