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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR31636:SF62
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.014s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0130909.1
n.a. PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] gi|502145044|ref|XP_004505853.1| chr0 59461397 59464205 +
1 domain prediction
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Lj0g3v0167869.1
n.a. n.a. chr0 79913066 79916883 +
1 domain prediction
 –
Lj0g3v0220789.1
n.a. PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] gi|502145044|ref|XP_004505853.1| chr0 113160966 113161702 -
1 domain prediction
 –
Lj0g3v0300249.1
n.a. n.a. chr0 155998676 155999681 +
1 domain prediction
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Lj0g3v0300259.1
n.a. PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] gi|502145044|ref|XP_004505853.1| chr0 155999906 156006103 +
1 domain prediction
 –
Lj0g3v0303729.1
n.a. n.a. chr0 158207994 158216714 +
1 domain prediction
 –
Lj0g3v0303739.1
n.a. PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] gi|502145044|ref|XP_004505853.1| chr0 158207994 158216896 -
1 domain prediction
 –
Lj0g3v0303759.2
n.a. PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] gi|502145044|ref|XP_004505853.1| chr0 158214045 158214687 -
1 domain prediction
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Lj3g3v1664580.1
n.a. SCARECROW-like protein [Medicago truncatula] gi|357454185|ref|XP_003597373.1| chr3 21329944 21332120 +
1 domain prediction
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Lj3g3v3211130.1
n.a. SCARECROW-like protein [Medicago truncatula] gi|357472765|ref|XP_003606667.1| chr3 39606681 39608396 -
1 domain prediction
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Lj3g3v3212140.1
n.a. PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] gi|502145044|ref|XP_004505853.1| chr3 39608541 39609528 -
1 domain prediction
 –
Lj3g3v3212150.1
n.a. PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] gi|502145044|ref|XP_004505853.1| chr3 39611903 39612500 -
1 domain prediction
 –