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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR33144:SF3
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.014s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0072439.1
n.a. 6b-interacting protein 2 [Nicotiana tabacum] gi|169264928|dbj|BAG12304.1| chr0 26875914 26877079 +
1 domain prediction
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Lj0g3v0181809.1
n.a. 6b-interacting protein 2 [Nicotiana tabacum] gi|169264928|dbj|BAG12304.1| chr0 88754659 88755926 -
1 domain prediction
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Lj0g3v0261539.1
n.a. HGWP repeat containing protein-like protein [Medicago truncatula] gi|357487581|ref|XP_003614078.1| chr0 135525486 135527475 -
1 domain prediction
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Lj0g3v0261539.2
n.a. 6b-interacting protein 2 [Nicotiana tabacum] gi|169264928|dbj|BAG12304.1| chr0 135526329 135527472 -
1 domain prediction
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Lj0g3v0303389.1
n.a. HGWP repeat containing protein-like protein [Medicago truncatula] gi|357487581|ref|XP_003614078.1| chr0 157898155 157904168 +
1 domain prediction
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Lj0g3v0303389.2
n.a. HGWP repeat containing protein-like protein [Medicago truncatula] gi|357487581|ref|XP_003614078.1| chr0 157898155 157903752 +
1 domain prediction
 –
Lj0g3v0353969.1
n.a. 6b-interacting protein 2 [Nicotiana tabacum] gi|169264928|dbj|BAG12304.1| chr0 186392941 186400631 -
1 domain prediction
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Lj0g3v0353969.2
n.a. 6b-interacting protein 2 [Nicotiana tabacum] gi|169264928|dbj|BAG12304.1| chr0 186392941 186395567 -
1 domain prediction
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Lj4g3v3017370.2
n.a. HGWP repeat containing protein-like protein [Medicago truncatula] gi|357487581|ref|XP_003614078.1| chr4 40492204 40496229 +
1 domain prediction
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Lj6g3v0635190.3
n.a. HGWP repeat containing protein-like protein [Medicago truncatula] gi|357487581|ref|XP_003614078.1| chr6 6214273 6215750 -
1 domain prediction
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