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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR34052:SF1
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.015s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0252309.1
n.a. CUB and sushi domain-containing protein 3 [Theobroma cacao] gi|508706301|gb|EOX98197.1| chr0 130801641 130802599 +
1 domain prediction
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Lj0g3v0295999.1
n.a. CUB and sushi domain-containing protein 3 [Theobroma cacao] gi|508706301|gb|EOX98197.1| chr0 153823728 153824199 +
1 domain prediction
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Lj0g3v0300389.1
n.a. CUB and sushi domain-containing protein 3 [Theobroma cacao] gi|508706301|gb|EOX98197.1| chr0 156080698 156081053 -
1 domain prediction
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LotjaGi2g1v0008300.1
n.a. Blue copper protein; TAIR: AT2G15780.1 Cupredoxin superfamily protein; Swiss-Prot: sp|A2BLW3|TRM56_HYPBU tRNA (cytidine(56)-2'-O)-methyltransferase; TrEMBL-Plants: tr|I3STL3|I3STL3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0008300 LjG1.1_chr2 2787268 2788323 -
1 domain prediction
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LotjaGi2g1v0078200.1
n.a. Blue copper protein; TAIR: AT2G15780.1 Cupredoxin superfamily protein; Swiss-Prot: sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3; TrEMBL-Plants: tr|I3STL3|I3STL3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0078200 LjG1.1_chr2 21019924 21026776 -
1 domain prediction
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LotjaGi2g1v0078300.1
n.a. Blue copper protein; TAIR: AT2G15780.1 Cupredoxin superfamily protein; Swiss-Prot: sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3; TrEMBL-Plants: tr|I3STL3|I3STL3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0078300 LjG1.1_chr2 21078707 21079850 -
1 domain prediction
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