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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR34282
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.014s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0352529.1
n.a. n.a. chr0 185417151 185421427 +
1 domain prediction
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Lj0g3v0352539.1
n.a. Uncharacterized protein TCM_034025 [Theobroma cacao] gi|508722845|gb|EOY14742.1| chr0 185417151 185422716 -
1 domain prediction
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Lj2g3v0798860.1
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508783503|gb|EOY30759.1| chr2 12643750 12647268 +
1 domain prediction
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Lj2g3v0798870.1
n.a. n.a. chr2 12644857 12648525 -
1 domain prediction
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LotjaGi2g1v0218500.1
n.a. DUF4378 domain protein; TAIR: AT3G24630.1 hypothetical protein; Swiss-Prot: sp|Q8NHY0|B4GN2_HUMAN Beta-1,4 N-acetylgalactosaminyltransferase 2; TrEMBL-Plants: tr|I1L4J6|I1L4J6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0218500 LjG1.1_chr2 67314674 67319245 +
1 domain prediction
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LotjaGi2g1v0218500.2
n.a. DUF4378 domain protein; TAIR: AT3G24630.1 hypothetical protein; Swiss-Prot: sp|Q8NHY0|B4GN2_HUMAN Beta-1,4 N-acetylgalactosaminyltransferase 2; TrEMBL-Plants: tr|I1L4J6|I1L4J6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0218500 LjG1.1_chr2 67314701 67318899 +
1 domain prediction
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LotjaGi2g1v0218500.3
n.a. DUF4378 domain protein; TAIR: AT3G24630.1 hypothetical protein; Swiss-Prot: sp|Q8NHY0|B4GN2_HUMAN Beta-1,4 N-acetylgalactosaminyltransferase 2; TrEMBL-Plants: tr|I1L4J6|I1L4J6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0218500 LjG1.1_chr2 67314722 67319159 +
1 domain prediction
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LotjaGi4g1v0465900.1
n.a. Cytochrome c oxidase subunit 3; TAIR: AT5G42710.1 hypothetical protein; Swiss-Prot: sp|P49444|PP2C1_PARTE Protein phosphatase 2C 1; TrEMBL-Plants: tr|K7L554|K7L554_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0465900 LjG1.1_chr4 83662024 83668429 -
1 domain prediction
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