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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • SIGNAL_PEPTIDE_N_REGION
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We have found 10861 results. Now displaying 1 of 218 with 50 rows per page. This search has taken 15.821s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LjKlavier leucine-rich repeat receptor-like kinase [Lotus japonicus] gi|353677868|dbj|BAL04590.1| chr1 34474974 34479067 +
LjSymRK receptor-like kinase SYMRK [Lotus japonicus] gi|21622628|gb|AAM67418.1|AF492655_1 chr2 23244149 23250251 -
LjNfr5 Nod-factor receptor 5 [Lotus japonicus] gi|37651074|emb|CAE02597.1| chr2 27399749 27402036 -
LjNfr1 Nod-factor receptor 1b [Lotus japonicus] gi|37651060|emb|CAE02590.1| chr2 37916948 37922957 +
LjFls2 flagellin-sensing 2-like protein [Lotus japonicus] gi|355346200|gb|AER60531.1| chr4 3284600 3289068 +
LjCkx2 PREDICTED: cytokinin dehydrogenase 3-like [Cicer arietinum] gi|502150402|ref|XP_004507936.1| chr4 29817085 29822610 +
LjCkx3 PREDICTED: cytokinin dehydrogenase 3-like [Glycine max] gi|356558359|ref|XP_003547474.1| chr5 10137598 10141548 +
LjCkx5 PREDICTED: LOW QUALITY PROTEIN: cytokinin dehydrogenase 5-like [Glycine max] gi|356509660|ref|XP_003523564.1| chr5 32118144 32122298 +
LjCkx4 FAD linked oxidase, N-terminal [Medicago truncatula] gi|124360772|gb|ABN08744.1| chr6 15350730 15354064 -
n.a. n.a. chr0 147185 148933 -
n.a. PREDICTED: CLAVATA3/ESR (CLE)-related protein 6-like [Cicer arietinum] gi|502179021|ref|XP_004516357.1| chr0 240462 241193 -
n.a. hypothetical protein SPAPADRAFT_64676 [Spathaspora passalidarum NRRL Y]-27907] gi|344305338|gb|EGW35570.1| chr0 300849 302392 +
n.a. endonuclease/exonuclease/phosphatase [Pseudozyma hubeiensis SY62] gi|501310917|dbj|GAC99660.1| chr0 321017 323895 +
n.a. 6,7-dimethyl-8-ribityllumazine synthase [Theobroma cacao] gi|508785111|gb|EOY32367.1| chr0 591889 594675 +
n.a. n.a. chr0 659125 660913 +
n.a. n.a. chr0 681944 688099 -
n.a. PREDICTED: UPF0420 protein C16orf58 homolog [Glycine max] gi|356545865|ref|XP_003541354.1| chr0 1185009 1188936 +
n.a. hypothetical protein PTSG_01573 [Salpingoeca sp]. ATCC 50818] gi|326435422|gb|EGD80992.1| chr0 1269174 1269762 -
n.a. Phi-1 protein [Medicago truncatula] gi|357520369|ref|XP_003630473.1| chr0 1290219 1290334 +
n.a. hypothetical protein AGABI2DRAFT_180549 [Agaricus bisporus var]. bisporus H97] gi|426193406|gb|EKV43339.1| chr0 1290970 1291227 +
n.a. PREDICTED: PXMP2/4 family protein 4-like [Cicer arietinum] gi|502093311|ref|XP_004489899.1| chr0 1393233 1402858 +
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like isoform X1 [Cicer arietinum] gi|502158481|ref|XP_004511169.1| chr0 1486200 1495290 -
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like isoform X1 [Cicer arietinum] gi|502158481|ref|XP_004511169.1| chr0 1491342 1495290 -
n.a. PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Glycine max] gi|356556680|ref|XP_003546651.1| chr0 1497377 1505015 -
n.a. PREDICTED: 1-acylglycerophosphocholine O-acyltransferase 1-like [Glycine max] gi|356506322|ref|XP_003521934.1| chr0 1595023 1597236 -
n.a. polysaccharide biosynthesis protein CapD [Porphyromonas asaccharolytica DSM 20707] gi|332299978|ref|YP_004441899.1| chr0 1617631 1619240 -
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 7-like [Vitis vinifera] gi|359479963|ref|XP_002268492.2| chr0 1761412 1762646 +
n.a. sulfurtransferase [Candidatus Nitrosoarchaeum koreensis] gi|494814782|ref|WP_007550190.1| chr0 1877180 1877694 +
n.a. CLE18 protein [Glycine max] gi|321172976|gb|ADW77272.1| chr0 2220326 2221327 -
n.a. PREDICTED: galactose oxidase-like [Cicer arietinum] gi|502126221|ref|XP_004499224.1| chr0 2886141 2888723 +
n.a. ATP-dependent DNA helicase PIF1 [Medicago truncatula] gi|357450461|ref|XP_003595507.1| chr0 2948135 2951058 -
n.a. PREDICTED: mitochondral 37S ribosomal protein S27-like isoform 1 [Glycine max] gi|356504678|ref|XP_003521122.1| chr0 3299826 3302953 -
n.a. PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 9 [Glycine max] gi|356543758|ref|XP_003540327.1| chr0 3489619 3491164 -
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 36-like [Glycine max] gi|356506381|ref|XP_003521962.1| chr0 3510033 3514365 +
n.a. PREDICTED: 21 kDa protein-like [Cicer arietinum] gi|502180339|ref|XP_004516616.1| chr0 3530584 3531319 -
n.a. PREDICTED: 21 kDa protein-like [Cicer arietinum] gi|502180339|ref|XP_004516616.1| chr0 3534773 3535660 -
n.a. PREDICTED: ycf20-like protein-like isoform X1 [Cicer arietinum] gi|502146602|ref|XP_004506525.1| chr0 3563765 3566679 +
n.a. PREDICTED: ycf20-like protein-like isoform X1 [Cicer arietinum] gi|502146602|ref|XP_004506525.1| chr0 3563765 3566679 +
n.a. Nitroreductase family protein isoform 1 [Theobroma cacao] gi|508725160|gb|EOY17057.1| chr0 3568044 3573182 -
n.a. Nitroreductase family protein isoform 2 [Theobroma cacao] gi|508725161|gb|EOY17058.1| chr0 3570670 3573182 -
n.a. PREDICTED: protease Do-like 5, chloroplastic-like, partial [Cicer arietinum] gi|502079519|ref|XP_004486285.1| chr0 3603869 3606364 +
n.a. zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] gi|15239925|ref|NP_199176.1| chr0 3841556 3843529 +
n.a. DNAse I-like superfamily protein isoform 4 [Theobroma cacao] gi|508782293|gb|EOY29549.1| chr0 4136058 4137393 +
n.a. early nodulin Enod5 [Trifolium repens] gi|15982208|emb|CAC84520.1| chr0 4154811 4154973 +
n.a. Kinase-like protein [Medicago truncatula] gi|357438737|ref|XP_003589645.1| chr0 4201445 4201553 -
n.a. PREDICTED: laccase-2-like [Cicer arietinum] gi|502148461|ref|XP_004507172.1| chr0 4264634 4266177 +
n.a. PREDICTED: zeatin O-glucosyltransferase-like [Glycine max] gi|356537475|ref|XP_003537252.1| chr0 4407594 4408548 +
n.a. PREDICTED: cyclin-dependent kinase-like 5 [Saimiri boliviensis boliviensis] gi|403263752|ref|XP_003924179.1| chr0 4664417 4664800 -
n.a. PREDICTED: probable galacturonosyltransferase 11-like isoform 1 [Glycine max] gi|356516879|ref|XP_003527120.1| chr0 4711656 4715821 -
n.a. PREDICTED: cationic peroxidase 1-like [Cicer arietinum] gi|502129543|ref|XP_004500339.1| chr0 4767494 4769901 -