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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • cd07378
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.016s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v0636570.1
n.a. PREDICTED: purple acid phosphatase 17-like isoform X1 [Cicer arietinum] gi|502164940|ref|XP_004513338.1| chr2 10163608 10166676 -
1 domain prediction
 –
Lj4g3v2404250.1
n.a. PREDICTED: purple acid phosphatase 8-like [Cicer arietinum] gi|502141686|ref|XP_004504592.1| chr4 33384642 33390665 -
1 domain prediction
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Lj4g3v2405410.1
n.a. PREDICTED: purple acid phosphatase 8-like [Glycine max] gi|356525044|ref|XP_003531137.1| chr4 33413351 33417850 +
1 domain prediction
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LotjaGi2g1v0006100.1
n.a. Purple acid phosphatase family protein; TAIR: AT3G17790.1 purple acid phosphatase 17; Swiss-Prot: sp|Q9SCX8|PPA17_ARATH Purple acid phosphatase 17; TrEMBL-Plants: tr|I1ND52|I1ND52_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0006100 LjG1.1_chr2 2146931 2155438 -
2 domain predictions
1 GO term
LotjaGi2g1v0190500.1
n.a. Purple acid phosphatase; TAIR: AT3G17790.1 purple acid phosphatase 17; Swiss-Prot: sp|Q9SCX8|PPA17_ARATH Purple acid phosphatase 17; TrEMBL-Plants: tr|I1KQM7|I1KQM7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0190500 LjG1.1_chr2 62091570 62094811 -
2 domain predictions
1 GO term
LotjaGi2g1v0190500.2
n.a. Purple acid phosphatase; TAIR: AT3G17790.1 purple acid phosphatase 17; Swiss-Prot: sp|Q9SCX8|PPA17_ARATH Purple acid phosphatase 17; TrEMBL-Plants: tr|I1KQM7|I1KQM7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0190500 LjG1.1_chr2 62091854 62094028 -
2 domain predictions
1 GO term
LotjaGi4g1v0357200.1
n.a. PURPLE ACID PHOSPHATASE family protein; TAIR: AT2G01890.1 purple acid phosphatase 8; Swiss-Prot: sp|Q8VYZ2|PPA8_ARATH Purple acid phosphatase 8; TrEMBL-Plants: tr|I3S4X8|I3S4X8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0357200 LjG1.1_chr4 73596508 73602532 -
2 domain predictions
1 GO term
LotjaGi4g1v0357400.1
n.a. PURPLE ACID PHOSPHATASE family protein; TAIR: AT2G01880.1 purple acid phosphatase 7; Swiss-Prot: sp|Q8S341|PPA7_ARATH Purple acid phosphatase 7; TrEMBL-Plants: tr|I1KRR2|I1KRR2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0357400 LjG1.1_chr4 73609244 73620367 +
2 domain predictions
1 GO term