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IPR005033 is a YEATS.
<p>This family is named after YEATS (Yaf9, ENL, AF9, Taf14, and Sas5), an evolutionarily conserved module present in 4 proteins (ENL, AF9, GAS41, and YEATS2) in humans and 3 proteins (Sas5, Taf14, and Yaf9) in yeast. These proteins are found in major chromatin-remodeling and histone acetyl-transferase (HAT) complexes and implicated in regulation of chromatin structure, histone acetylation and deposition, gene transcription and DNA damage response. The YEATS domain, which as previously shown is found in a number of chromatin-associated proteins, has recently been shown to have the capacity to bind histone lysine acetylation [[cite:PUB00091361]]. The ability of the YEATS domains of human AF9 and yeast Taf14 to recognise the histone mark H3K9ac, have shown that these proteins are members of the family of acetyllysine readers [[cite:PUB00097418]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: protein AF-9 homolog [Glycine max] gi|356545002|ref|XP_003540935.1| | 5 | ||
| – | PREDICTED: protein AF-9 homolog [Glycine max] gi|356538281|ref|XP_003537632.1| | 6 | ||
| – | Transcription initiation factor TFIID subunit 14b; TAIR: AT5G45600.1 YEATS family protein; Swiss-Prot: sp|Q9FH40|TA14B_ARATH Transcription initiation factor TFIID subunit 14b; TrEMBL-Plants: tr|I3T1T5|I3T1T5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0381600 | 9 | ||
| – | Transcription initiation factor TFIID subunit 14b; TAIR: AT5G45600.1 YEATS family protein; Swiss-Prot: sp|Q9FH40|TA14B_ARATH Transcription initiation factor TFIID subunit 14b; TrEMBL-Plants: tr|I3T1T5|I3T1T5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0381600 | 9 | ||
| – | Transcription initiation factor TFIID subunit 14b; TAIR: AT5G45600.1 YEATS family protein; Swiss-Prot: sp|Q9FH40|TA14B_ARATH Transcription initiation factor TFIID subunit 14b; TrEMBL-Plants: tr|V7ADV7|V7ADV7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0516000 | 10 | ||
| – | Transcription initiation factor TFIID subunit 14b; TAIR: AT5G45600.1 YEATS family protein; Swiss-Prot: sp|Q9FH40|TA14B_ARATH Transcription initiation factor TFIID subunit 14b; TrEMBL-Plants: tr|V7ADV7|V7ADV7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0516000 | 9 | ||
| – | Transcription initiation factor TFIID subunit 14b; TAIR: AT5G45600.1 YEATS family protein; Swiss-Prot: sp|Q9FH40|TA14B_ARATH Transcription initiation factor TFIID subunit 14b; TrEMBL-Plants: tr|V7ADV7|V7ADV7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0516000 | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 14.29 |