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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0300670 |
| Transcript ID | Lj3g3v0300670.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like [Glycine max] gi|356556686|ref|XP_003546654.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 217 | 217 | 2.50E-181 | – | |
| PANTHER | 1 | 217 | 217 | 2.50E-181 | ||
| SUPERFAMILY | 2 | 143 | 142 | 8.37E-13 | ||
| Gene3D | 2 | 147 | 146 | 1.50E-09 | ||
| PRINTS | 21 | 48 | 28 | 4.00E-70 | ||
| PRINTS | 49 | 76 | 28 | 4.00E-70 | ||
| PRINTS | 77 | 102 | 26 | 4.00E-70 | ||
| PRINTS | 103 | 129 | 27 | 4.00E-70 | ||
| MobiDBLite | 145 | 165 | 21 | – | – | |
| PRINTS | 186 | 215 | 30 | 4.00E-70 | ||
| SUPERFAMILY | 188 | 211 | 24 | 8.37E-13 | ||
| Gene3D | 192 | 209 | 18 | 1.50E-09 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Protein phosphatase type 2A complex | A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Protein phosphatase regulator activity | Modulates the activity of a protein phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a protein substrate molecule. |
Expression pattern of Lj3g3v0300670.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0300670.1, powered by CORGI.
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