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Lj3g3v3085560.1

Overview

Field Value
Gene ID Lj3g3v3085560
Transcript ID Lj3g3v3085560.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein SAND-like isoform X2 [Cicer arietinum] gi|502145362|ref|XP_004505997.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13027
1 175 175 7.90E-177
IPR004353
PANTHER
PTHR13027:SF7
1 175 175 7.90E-177 –
Pfam
PF03164
2 319 318 1.00E-87
IPR004353
PRINTS
PR01546
26 47 22 1.90E-36
IPR004353
PRINTS
PR01546
50 63 14 1.90E-36
IPR004353
PRINTS
PR01546
74 90 17 1.90E-36
IPR004353
PRINTS
PR01546
99 122 24 1.90E-36
IPR004353
PRINTS
PR01546
127 153 27 1.90E-36
IPR004353
PANTHER
PTHR13027:SF7
208 325 118 7.90E-177 –
PANTHER
PTHR13027
208 325 118 7.90E-177
IPR004353
PRINTS
PR01546
274 288 15 1.90E-36
IPR004353
PRINTS
PR01546
290 303 14 1.90E-36
IPR004353
PRINTS
PR01546
303 323 21 1.90E-36
IPR004353

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006623
Biological process Protein targeting to vacuole The process of directing proteins towards the vacuole, usually using signals contained within the protein.
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj3g3v3085560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v3085560.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.