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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0335400 |
| Transcript ID | LotjaGi2g1v0335400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | T-complex protein 1 subunit epsilon; TAIR: AT1G32310.1 valine-tRNA ligase; Swiss-Prot: sp|Q97QP7|IGA1A_STRPN Immunoglobulin A1 protease; TrEMBL-Plants: tr|I3S0A0|I3S0A0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0335400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:81128210..81132320) extracted from Lotus japonicus Gifu genome v1.2.
TTTGGAACAGGCAAATATGGATTATATTGATATAATTGTTTTTGAATAACCTTAATTTGCAACTACTACCTGCCTTGAGT TAATACTTTTTTTTTGGGTTAAAGGCTTGAGTTTAAAATTTGAAGCCCATTAAAAGAGCCTAACGGATATCGAAACATGT TCTTAAGTCTTTTGTCGTGTTAGATTCGGAGTTCGATTCCACACTTACACTGAGCTCCAGCTCCAGCTTCCGAACGAGAA AAAGCGATTCTGAGGAGAACGATGAATAGTTCATCACCGGCTCATTCATCGATATCCACCACGGCGGTTGTGAGCGGCGG CGGTGCAAGTAACGCGGCTGTTTCCTTTGACGACCTCCATTTCCCGTTTGATCCCATTTCAACGCAAGAGCGAAAGGACG AGGTTATGCTAGGTTCATCTTTTCACACTCCATCATCACCCCTTTGCTTTTATCCGTTATTCCTGAGTTTTTTCTCAAAT TATTGTTAACAGCTAATTGATTTTACTGTTCAATGGAAATTAATTGTTTCTTGATGTTAGTTTAGGGTTTCTCAGGTTTG AATATTATGTAGCTTTAAATTGGTTTAATTGCGTATGGTTCATCTCAGGCAGAACTTTTTTTTTATCTTGTCTTGTATGT TGAATTCACTATATATTATAAGGGCCAAGTTGAATCTTTGGTTTAAGTAGAGCAGTGTTGGCATTTTTCTGTGTGGTTAT GGAACCTTATTATAATGGACTCATTTGCCTAGTCTTCCTGTACTTAAACATATTCGGATTTCCTATTTTTTGCAGTGTTA AAATCGGATATCATGGCTGCACTTGACAAGGAGGTTAAATCCTTGGATGAAGATAACTGGAAGTTTGAAGGACCTCGTTC TCGTATTAACCTTACATCACGTCGAGGCGGAGGTTAGTTTATCAATCACTTAATGACCTTATTAGAGTATCTTAGATTTC TTTGCAATTTTTTTGGATAATTTAGAGCATTACTGCGATACATATTGGTTTCCAGTAATTAAAACTTTATACCCTAAATC GTAGATGATTCTTACCTTATGTTAATTGATACTATCTACTTCAGTGGATACTTATAGTCATAATAACTTCATGGTGTTGA AGCTAGCTGAATGAAATTATTCTAAATGTGACTGAAAAATAGATGTATATATCCGCTCTGATGTGCATTTTTCATGACAT GCATGCAGTTATGCCTTCAGCATGATAATCAAAATACATAAATATTCTATGAATCTGAATCCGAAACTTGTCATCTCTGG TATTTTTCATATCTTTTAATGATCTTTTAAGTAAAATTTTGGAATGTTAATTAAATCCAACCCAGGCATATCATGGTAAA AACATAGTGAAGCACTGGTACTTGAGAAGAGGCAAAGTACCCGTACAGGGTACGTACTCATTGCGGGTACGCGCTGGGTA CGTTTCGGCTACGTACCCTAATGTGATTTCAAACAAACAAAAAATTGTGTACTTCTCGGGTACTCACCGGGTACTCTTTG GGGTACTTTTATCATCAAAACTACATAGTTTCATCATAGCCCCAAATGCTAGGTTTGGATATACCCATTCGCACATCCAA GCCTAAAAAATCAGCTCCTCTCTGCTGGGGCTCTGCTGTCAGTGCACACGATCTAACTCGCCGTCGCTCATCATGCTGTC CTCCGCGCATAGGACTGTCGACCTCGCGGCATGTCTTGGCTCCGACTCTGGTCTTTCTCTTTTGTTCTTTGCTCTGGCTC TGCTAGTTCCCTATTTATTTTCTTTTTGTAATTTGTGCTCTTTATCTATCTTTTATATAATTTAATTACATTTATATAAA ATTTATATTTTATCGTGTTTTGTGTGTGTGTGTGTGTGTGTATACAAACACACACACTATCGTACCCGTACCCAGGGTTT TTTTTTTAAAATAAAAATTGCGTACCCAGTACCGTACCGTACCCGTACCTGTGCATCAACATACAAATACATCCATATAT TCTTTGAACAACTCTATCATTATCTACCATTCTCAGCTATATTCCTTGAACAACACTACCATTTCAGCCTGTTCTGGATT AGCTATCATTTTCAGTTCTTTCTTGTCTTCCTCTGTTCCCTTGTTCGGATTATTAAACCATTTTTCTGTGTCCTCAACCT TCTCTTTTGATTGAGTATCGTACACATTACGAATCATAGGGGATCAATTGATGAATCTACATTTTTTTGACCCTGAATAA ACTACTCTCCACTAAGTCACCATATTGATGGTCCCACTTGACACCTTAGGCCTCCTTGAGTAGGCTTGCAATGTTTCAGG GTTAGGATGCTTGGGTTTCGGCAGCAGTGGCCCATATGTTGTTGCTTGCTTATTTCTCCACTTTCAATTTAAAAAACATA GGAATAACTCAACTCAGTGCCTTTAACTCAGCCAATATATGTTATATGATATAATGATGAATTCTAATAAACAATCGTGC TCTTGGTACACGGTTGAAATCTGGTTTTGTCAAGCCACAAGATCTTTGGGCATTACTTTTCTGGTCAAAGAAAGTAACAA ACGATTAAGGATGATTGGCTTTACTGTTATATTAAGTTAAAACACATCTATTTTTGTCAGAATTCTATCTGATAAATACA TTCTGGTGTGGTTTGCTTGTATATGATGACATTTTCATTGCCCTGCCCTGCACCCCCCCCCCCCCCCCCCCTCTCCCCTA TTTTTGTCAGGATTCTAAATGATAAATACATCCTGGTGTGGTTTGCACGTTTATGATAACATTTTCATTGCCCTTCCCTA CCACCCCCCTCCCTTTCCTATTTGCTGATCTTTCTGACATATATGCCTACTGATGTGGAGTTTTGTATAGCTCATTTTAT GGTCCTGACATCTTGGTTAATCTTGTTGAGCATTGTTTTCCTTTTCCTCTCCCCTTCTCCATATTGGCCTTGGAAACCTG AGACACTTGAACTTTCCTGCAGGTGGTCCTCTCCCTTGGCAAACAGAGATTTCAAAGAATTGGAATCTGCCTCCACCAAA ATAGTTGGAACTCTCACCTCAAAGAACTGTACCTCTGTTCAATTATCAAGTGATTATGGTTGTGATCTACACATAAGTAC TGTTATGCTGCATTTCATTCCCCCTGGTAGAAAGCCCAGCAGTTATACTACAACTTCTGGTGATATGTAGTTCTGGAGGA GCTTTGAGGAATTGTTGATTGCAAACATAGGTTCCTTCCAGGCATGATTTTCAGTCACAGTTTCCCTATGTCTTTCTAGT CTGGGTAGAGAAGTAGGTGTGCTTTAATGTATGCAATCTCATTGCTTTAGTTTTGACTCTTTTGAGGGATCAATGGTTAA TTGCGGATGATTGTTTCAAATGTAAGGTATTTAAATGCAGGGAGAATCATTGTTGTATTGGAGTAACAATTAATGGCTAG TGTTAAATGAAAGTTATTGACAGGTAGCTAGTTGCATTACTTAACTATTTACCATTGACCATTTCCTACAGGTTCAACAA TATTTCCATATTTTTCTATATTTCCATATTTTTCTATTTCTGTTTGTCTCTTCCTTCCTCCCTCCCTCTCCCCCAGGGAT GGCAACGGGTAGGATCGGGCACGGGTTTTACAATTACCAAACCCAGAACCCAAACCCAAACCCAAACACAAACCCTTATG GGCGATAAAATGAAATCCATGCCCAAATCCATTGGGTTTCGGATTTACCCGAAACTCAAACCCAAACTCATTAGTTACGT AGCAACTCAATCCAGAAGTTACTTTCATATAAAAAAAAGTGAAATTCATATAAAGAAAAAAAAAACAAATACTATTCATC ATCCTCATCCATCACTAAAGTGAGACAACAATAGTTTAAAGTTTACTTTCTCAAACATACAAAAGTACAATTAATCATCA AACACTAAGAACAAAGTTTATAAATATATATATGTACGAGGGTTTTTTTGTAATTTTATGTTTCGGATATCTTTGGGTTC GGGTTTGGGCGGGTATGAGCACGGATTTAACTAATACCAAATCCAAACCCATAAATGGCTACAGTAACGGGCAAAACCCA AACCCAAATCCAGTCAACTCGGATTTTGCCC
CDS sequence (LotjaGi2g1v0335400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATAGTTCATCACCGGCTCATTCATCGATATCCACCACGGCGGTTGTGAGCGGCGGCGGTGCAAGTAACGCGGCTGT TTCCTTTGACGACCTCCATTTCCCGTTTGATCCCATTTCAACGCAAGAGCGAAAGGACGAGGTTATGCTAGTGTTAAAAT CGGATATCATGGCTGCACTTGACAAGGAGGTTAAATCCTTGGATGAAGATAACTGGAAGTTTGAAGGACCTCGTTCTCGT ATTAACCTTACATCACGTCGAGGCGGAGGTGGTCCTCTCCCTTGGCAAACAGAGATTTCAAAGAATTGGAATCTGCCTCC ACCAAAATAG
Protein sequence (LotjaGi2g1v0335400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNSSSPAHSSISTTAVVSGGGASNAAVSFDDLHFPFDPISTQERKDEVMLVLKSDIMAALDKEVKSLDEDNWKFEGPRSR INLTSRRGGGGPLPWQTEISKNWNLPPPK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 104 | 104 | 2.3E-40 | ||
| MobiDBLite | 83 | 109 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Anaphase-promoting complex binding | Interacting selectively and non-covalently with an anaphase-promoting complex. A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. | ||
| Biological process | Negative regulation of organ growth | Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organ of an organism. |
Expression pattern of LotjaGi2g1v0335400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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