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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0132000 |
| Transcript ID | LotjaGi5g1v0132000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exocyst complex component sec15B; TAIR: AT3G56640.1 exocyst complex component sec15A; Swiss-Prot: sp|Q9LXX6|SC15A_ARATH Exocyst complex component SEC15A; TrEMBL-Plants: tr|A0A151S2F4|A0A151S2F4_CAJCA Putative exocyst complex component 6; Found in the gene: LotjaGi5g1v0132000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:30788904..30793503) extracted from Lotus japonicus Gifu genome v1.2.
GGAAAATGTGGCTATTGTGTTAACTCAACACAACACCCCTTTGTATTAATTAATAAAGCAAGTAATTTTAACTAAGTCAA TTGAGATTGACGTTGGAGTAAAATGTTTGAACTTGGGAATCGCCGTCTGTCTAGCTAAGAAGAAATCGGCGACGGAAGTT TCAATCCAATAATCATTTTCACTTTTAACACAACTAAACTTACAAACAGACACGCACGCACTCTATCAAATTCCAAACCC CATTTTTTCCTCTTTCCGCTTCGACCAGGTGCCTTTCTTCTCTCAACTGGTTTTTTACTTATATCTTATTTTTTCTGTCA ATTTATGTCTTCAAATCTATGAATGATGTTTCTGTTCTTTGTCTATTCTGGTTCTTTTGCTGGGGTTTCGTTCTGTTTTT GAACCAATTTATGCTTCTGCTTTTCTTTTCTTTTTTTGGCATTTTTTTTTCCTTTTGCATTTGCTATCGGATACCATCTT TGTAAGCATAGTGCATACATAGTAAACACATGAAATTCAAGTTGGTTTATGTTGGAAATAGTTGTGCTTCCTTGCCTATT TTTATCTGATGATGTATAATTAATTTCTCTTAAGCTTGGTTTAGTATTTACTTTATTATTTTTTCTTTTGTTATTGATAC CATTACTTTGCTAAGTAAACAACATGCTCGTGTAAGACGATGGTGTTTCACTGCTGTTTTGATTTATTTGTTTTGCTAAC AATCTCTGGAGTATATCATTTTTGTTCAGCTTTGTTTGTTATATGGGTTCTAATTAGTATTAACTTCAAAATGATAGGAA TTCATGCAATCATGGATGTGAAAACAAAGAGGAGAACTGTGATTGAAAATGGTGATGCAGGGGAGGATAAGGTTCTAGCT ACTTTGATTGCAAATAGGGATGATGTTGGTCCTCTTGTCAGGCATGCCTTCGAAACGGGTCGGCCAGAGGGGTTCCTTCA CCAGATGAGTTACGTGGTTAAGAAAAAGGAAGCTGAAATCGAGGAGATGTGCAAGACCCATTACGAGGAATTCATCCTTG CAGTTGATGAGCTTCGCGGTGTGTTGGTTGATGCTGAGGAGCTAAAGAGAGAGCTCCATCGTGACAATCTTAAGTTGCAG GAGGTTGGCAGCACCCTGCTTGTCCGGCTTGAAGAGCTTCTTGAAACTTATTCTATTAAGAAGAATCTTACTGAAGCTAT GAATATGTCAAAGAACTGTATACAGGTGTTAGAGCTTTGTGTCAAGTGTAACAGTCACATTTCTGAAGGCCAGTTTTATC CTGCATTGAAAACTTTGGATTTACTTGAGAAAACTTACATGCAGAGTATTCCAGCACAGGCTCTCAAAAGGGCCATAGAG ACGAGAATTCCTGCAGTGAAGTTGCACATTGAGAAGAAAGTTTGCAGTGAAGTTAATGAATGGATGGTCCAAATTAGGAG TTCTGCTAAAAATATTGGGGAAACAGCGATTGGTCTTACTGCAACAGCTCGTCAAAGGGATGACGACATGCTTGAACAGC AGAGGAAGGCTGAGGAGCAAAGTATTTCAGGAGTAGGGGACCTGGCTTACACTTTGGATGTTGAACAATTTGATGAAGAT TCTGTTTTGAAGTTTGATCTTACACCTCTTTATCGTGCTTCTCATATTCATTATTGTCTGGGTATCCGAGAGAAGTTTCG TGAATATTACTACACTAATAGACTATTGCAATTGAATTCAGACCTGGAAATATCTTCAACACAGCCTTTTGTTGAGTCAT ACCAGACATTTTTTGCTCAAATGGCTGGATTCTTCATAGTCGAGGATAGAGTCCTGAGAACTGCTGGGGGCCTACTGTTA CCTGATCAAGTCGAAACAATGTGGGAGACAGCTGTTGCTAAAATGACGTCTGTTCTGGAGGAACAGTTCTCCGCTATGGA GTCGGCCACTCATCTTCTCTTGGTGAAGCATTATGTCACTCTACTTGCGTCTACTCTTAGACAATATGGATATGAGATAA GCACACTTCTTGATGTGCTTGATAGCAGCCATGGCAAGTACCACCAGCTTCTTTTGGATGAATGTCGGCAACAAATTGTT GATGTTCTTGGCAATGACTCATATGACCAAATGATAATGAAAAAGGAAACTGACTATGAGAATTGTATTCTGTCATTTAA TCTTCAAACATCAGATATTATGCCAGCTTTTCCATATGTTGCACCATTCTCCTCCATGGTACCCGATGCCTGTCGCATTG TGAGATCCTTTATCAAAGGCTCTGTTGATTACTTGTCTTATGGGATACACACGAATTTCTTTGATCTTGTGAGGAAGTAT TTGGACAAGTTCTTGATTGACGTATTAAATGTAACATTACTTGATACAATCAATAGTGGCACTGGCAACATCAGTGTGCC TCAAGTCATGCAGATTTCTGCCAATATAGCTGTCCTGGAAAGAGCTTGTGATTTTTTTCTCCGACATGTGGTCCAACTGT GTGGCTTGCCCGTCCGATCAGTTGAAAGGCCCGAAGCTACTTTAACTGCTAAGGTGGTTTTGAAGACATCCAGAGAAGCA GCTTATATTGCCCTGCTGAATCTGGTGAGCACAAAAATAGAGGAGTTTATGACTCTTACTGAAAGCATTAGTTGGACTTC AGAGGAGACAAATGAGAAAGGAAATGACTACATACATGAAGTGATCATTTACCTTGATTCTATTTTGTCCCCAGCACAAC AAATTTTACCCTTGGATGCTATGTACAAAGTCGGTTCTGGTATTTTTGAGCATATTTCCAATACCATAGTGGCTGCTTTT GCTAGCGATAGCGTCAAAAGGTTCAATGCAAGTGCTGTGATAAATATTGAATATGATCTACAGATCATAGAGAATTTTGC AGAAGAAAGGTTCTATTCTGCTGGTTTGGGTGAAATTTACAATGAGGGTAGTTTTAAGAGCTGCTTCATCGAAGCACGGC AACTAATTAATCTTTTGCTAAGTAGTCAACCTGACAATTTTATGAATCCTGTTATAAGGGAGAAGAGTTATTATGCATTG GATTACAAGAAGGTGGCTGCTATCTGTGACAAATTCAAGGATTCCGCAGATGGGATCTTTGGAAGCCTTGCCCATAAAAA TGCAAAGCAAAGTGCGAGAAAGAAATCAATGGACGTGCTAAAAAAGCGGCTTAAGGATTTCAATTGATAAGACTTTGAAT TATTCTTTCACAGGAAGTAGGGTGTAACTGAGGTGTTCTTTTTCGTGGACTGTGGATGTTTTAACTTCAGAATGAACCGT GTTTTATACATTGTTCTGAGTTGTTTGGCCTTAAAGATTTGTTCTCCCTTTATTCTGTTTATATAGCTCATCTGAATGAA TTAATCATGGAAAATTGCTTCGCCACTGCACACAGTCACATGTTCATTACCACACCACTTGTATTAAGCACTTCGGGGCT AATTATCTAGTTTGCAGCTATCTCCTTTGAATGTTCTTTCATACTTGTCATTCTAGCTTAGCAGTTCCTAGTCACCATTC AATATATATGTTGGCACATATTATCACTGATACTGGCATTAGACTAATATTTTTGCTACAATTTAGGTCCATTGTTAAGG AGAATTAGGTATGAGTAAGTTGACATGAATGTTAATTTGCTGCATAATTGAACCATAATTGTTTGTTAATAGATTGCATG CATAATGGACATATTATATGAACTGTGATGCAATAAAAGGACAATGATGCAATACCTATAAGCATTGTCCACAAATCCTT CAGGGGCTCTATTAGCAAACCACATACAAGCAACTGCATGAGAACATGGGATTCCAGTTAAGTCCCATCTCCTGCAAGCA CAGAACCTTCTTTCCAAATCAACCACATATTTGTCAGAATCCCAACAAGCTTCAAAGAAGGTAACATGTCCATTACCACA CCAGATGGCACACCATTTGTCAGAGTATTTCGTGGACAATTCAAGCTTTTGCTGCATGATGGGGCAAATTCCATTCCTCC ACCTGAGCATAAGATCCCTTTGCTTCACAATTCTGTTATTCAGATTAAACTTCAAGCCCTCCAACAGAGAAATTATTGGC TTCTTCCTGTGCTCCAGTATAACCCGATTGAAAGGTTCACACATGTTATTCACTTGCAGATCACAGCAAGTGTCTGTGCT AAAGTGTGCTCCTGACCACATCTTTGGTGGAAGCTCCATCATCTTCTTCCAGGCATCCTCATTAAGTAGCTTTAAAGCAT CAATTGCTTTTTTTCCATTCTGGAATGGTGCTTGCCCTAGCAGCACTCCACAGAGCAACCTTAATATCTGAACCAGGGTA CCTCTTCCTAAAGTTCCCGTAGAGATGCTTGACACAAATCTTGTGCTCCACATCTCATATAGATCCTGTAATGTATGCAC CAGTCCCTACACATATAAATAAATCAGTCAAAGCAATTAACATACATAAACAAAGGATAGAAAGTAACCTTTTGCTTGTC TGAAATGAATGCCCACTTTTTCTTCTCAACACTGTCCAAATTGACAAGGAGGTTTACAAACTAACTCCAAGGTTCTTTGG TTTCAGCCTCCACAACAACAAAAGCAATGGGAAACATTTG
CDS sequence (LotjaGi5g1v0132000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGTGAAAACAAAGAGGAGAACTGTGATTGAAAATGGTGATGCAGGGGAGGATAAGGTTCTAGCTACTTTGATTGC AAATAGGGATGATGTTGGTCCTCTTGTCAGGCATGCCTTCGAAACGGGTCGGCCAGAGGGGTTCCTTCACCAGATGAGTT ACGTGGTTAAGAAAAAGGAAGCTGAAATCGAGGAGATGTGCAAGACCCATTACGAGGAATTCATCCTTGCAGTTGATGAG CTTCGCGGTGTGTTGGTTGATGCTGAGGAGCTAAAGAGAGAGCTCCATCGTGACAATCTTAAGTTGCAGGAGGTTGGCAG CACCCTGCTTGTCCGGCTTGAAGAGCTTCTTGAAACTTATTCTATTAAGAAGAATCTTACTGAAGCTATGAATATGTCAA AGAACTGTATACAGGTGTTAGAGCTTTGTGTCAAGTGTAACAGTCACATTTCTGAAGGCCAGTTTTATCCTGCATTGAAA ACTTTGGATTTACTTGAGAAAACTTACATGCAGAGTATTCCAGCACAGGCTCTCAAAAGGGCCATAGAGACGAGAATTCC TGCAGTGAAGTTGCACATTGAGAAGAAAGTTTGCAGTGAAGTTAATGAATGGATGGTCCAAATTAGGAGTTCTGCTAAAA ATATTGGGGAAACAGCGATTGGTCTTACTGCAACAGCTCGTCAAAGGGATGACGACATGCTTGAACAGCAGAGGAAGGCT GAGGAGCAAAGTATTTCAGGAGTAGGGGACCTGGCTTACACTTTGGATGTTGAACAATTTGATGAAGATTCTGTTTTGAA GTTTGATCTTACACCTCTTTATCGTGCTTCTCATATTCATTATTGTCTGGGTATCCGAGAGAAGTTTCGTGAATATTACT ACACTAATAGACTATTGCAATTGAATTCAGACCTGGAAATATCTTCAACACAGCCTTTTGTTGAGTCATACCAGACATTT TTTGCTCAAATGGCTGGATTCTTCATAGTCGAGGATAGAGTCCTGAGAACTGCTGGGGGCCTACTGTTACCTGATCAAGT CGAAACAATGTGGGAGACAGCTGTTGCTAAAATGACGTCTGTTCTGGAGGAACAGTTCTCCGCTATGGAGTCGGCCACTC ATCTTCTCTTGGTGAAGCATTATGTCACTCTACTTGCGTCTACTCTTAGACAATATGGATATGAGATAAGCACACTTCTT GATGTGCTTGATAGCAGCCATGGCAAGTACCACCAGCTTCTTTTGGATGAATGTCGGCAACAAATTGTTGATGTTCTTGG CAATGACTCATATGACCAAATGATAATGAAAAAGGAAACTGACTATGAGAATTGTATTCTGTCATTTAATCTTCAAACAT CAGATATTATGCCAGCTTTTCCATATGTTGCACCATTCTCCTCCATGGTACCCGATGCCTGTCGCATTGTGAGATCCTTT ATCAAAGGCTCTGTTGATTACTTGTCTTATGGGATACACACGAATTTCTTTGATCTTGTGAGGAAGTATTTGGACAAGTT CTTGATTGACGTATTAAATGTAACATTACTTGATACAATCAATAGTGGCACTGGCAACATCAGTGTGCCTCAAGTCATGC AGATTTCTGCCAATATAGCTGTCCTGGAAAGAGCTTGTGATTTTTTTCTCCGACATGTGGTCCAACTGTGTGGCTTGCCC GTCCGATCAGTTGAAAGGCCCGAAGCTACTTTAACTGCTAAGGTGGTTTTGAAGACATCCAGAGAAGCAGCTTATATTGC CCTGCTGAATCTGGTGAGCACAAAAATAGAGGAGTTTATGACTCTTACTGAAAGCATTAGTTGGACTTCAGAGGAGACAA ATGAGAAAGGAAATGACTACATACATGAAGTGATCATTTACCTTGATTCTATTTTGTCCCCAGCACAACAAATTTTACCC TTGGATGCTATGTACAAAGTCGGTTCTGGTATTTTTGAGCATATTTCCAATACCATAGTGGCTGCTTTTGCTAGCGATAG CGTCAAAAGGTTCAATGCAAGTGCTGTGATAAATATTGAATATGATCTACAGATCATAGAGAATTTTGCAGAAGAAAGGT TCTATTCTGCTGGTTTGGGTGAAATTTACAATGAGGGTAGTTTTAAGAGCTGCTTCATCGAAGCACGGCAACTAATTAAT CTTTTGCTAAGTAGTCAACCTGACAATTTTATGAATCCTGTTATAAGGGAGAAGAGTTATTATGCATTGGATTACAAGAA GGTGGCTGCTATCTGTGACAAATTCAAGGATTCCGCAGATGGGATCTTTGGAAGCCTTGCCCATAAAAATGCAAAGCAAA GTGCGAGAAAGAAATCAATGGACGTGCTAAAAAAGCGGCTTAAGGATTTCAATTGA
Protein sequence (LotjaGi5g1v0132000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDVKTKRRTVIENGDAGEDKVLATLIANRDDVGPLVRHAFETGRPEGFLHQMSYVVKKKEAEIEEMCKTHYEEFILAVDE LRGVLVDAEELKRELHRDNLKLQEVGSTLLVRLEELLETYSIKKNLTEAMNMSKNCIQVLELCVKCNSHISEGQFYPALK TLDLLEKTYMQSIPAQALKRAIETRIPAVKLHIEKKVCSEVNEWMVQIRSSAKNIGETAIGLTATARQRDDDMLEQQRKA EEQSISGVGDLAYTLDVEQFDEDSVLKFDLTPLYRASHIHYCLGIREKFREYYYTNRLLQLNSDLEISSTQPFVESYQTF FAQMAGFFIVEDRVLRTAGGLLLPDQVETMWETAVAKMTSVLEEQFSAMESATHLLLVKHYVTLLASTLRQYGYEISTLL DVLDSSHGKYHQLLLDECRQQIVDVLGNDSYDQMIMKKETDYENCILSFNLQTSDIMPAFPYVAPFSSMVPDACRIVRSF IKGSVDYLSYGIHTNFFDLVRKYLDKFLIDVLNVTLLDTINSGTGNISVPQVMQISANIAVLERACDFFLRHVVQLCGLP VRSVERPEATLTAKVVLKTSREAAYIALLNLVSTKIEEFMTLTESISWTSEETNEKGNDYIHEVIIYLDSILSPAQQILP LDAMYKVGSGIFEHISNTIVAAFASDSVKRFNASAVINIEYDLQIIENFAEERFYSAGLGEIYNEGSFKSCFIEARQLIN LLLSSQPDNFMNPVIREKSYYALDYKKVAAICDKFKDSADGIFGSLAHKNAKQSARKKSMDVLKKRLKDFN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 791 | 791 | 0.0 | – | |
| PANTHER | 1 | 791 | 791 | 0.0 | ||
| PIRSF | 1 | 791 | 791 | 1.0E-239 | ||
| Coils | 78 | 105 | 28 | - | – | |
| Gene3D | 395 | 570 | 176 | 2.1E-27 | ||
| Pfam | 442 | 755 | 314 | 5.8E-75 | ||
| Gene3D | 580 | 730 | 151 | 1.7E-28 | ||
| ProSiteProfiles | 618 | 734 | 117 | 8.631 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Exocyst | A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals. | ||
| Biological process | Vesicle docking involved in exocytosis | The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis. |
Expression pattern of LotjaGi5g1v0132000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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