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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0164329 |
| Transcript ID | Lj0g3v0164329.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: phospholipid-transporting ATPase 3-like [Glycine max] gi|356524099|ref|XP_003530670.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 270 | 270 | 3.40E-200 | – | |
| PANTHER | 1 | 270 | 270 | 3.40E-200 | ||
| Phobius | 1 | 20 | 20 | – | – | |
| SUPERFAMILY | 7 | 134 | 128 | 2.48E-09 | – | |
| TMHMM | 21 | 43 | 23 | – | – | |
| Phobius | 21 | 43 | 23 | – | – | |
| Phobius | 44 | 68 | 25 | – | – | |
| Phobius | 69 | 93 | 25 | – | – | |
| TMHMM | 71 | 93 | 23 | – | – | |
| Phobius | 94 | 302 | 209 | – | – | |
| Gene3D | 130 | 176 | 47 | 3.60E-18 | ||
| ProSitePatterns | 142 | 148 | 7 | – | ||
| Gene3D | 215 | 267 | 53 | 3.60E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Phospholipid transport | The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Expression pattern of Lj0g3v0164329.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0164329.2, powered by CORGI.
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