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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3182290 |
| Transcript ID | Lj1g3v3182290.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | ACT domain repeat 4 isoform 2 [Theobroma cacao] gi|508707839|gb|EOX99735.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 335 | 335 | 5.00E-240 | – | |
| PANTHER | 1 | 335 | 335 | 5.00E-240 | – | |
| SUPERFAMILY | 15 | 85 | 71 | 5.56E-11 | – | |
| Gene3D | 16 | 69 | 54 | 6.40E-05 | – | |
| Pfam | 17 | 66 | 50 | 1.00E-06 | ||
| ProSiteProfiles | 18 | 95 | 78 | 10.463 | ||
| SUPERFAMILY | 104 | 175 | 72 | 7.64E-13 | – | |
| Gene3D | 104 | 161 | 58 | 1.20E-16 | – | |
| Pfam | 106 | 154 | 49 | 4.20E-10 | ||
| ProSiteProfiles | 107 | 184 | 78 | 13.186 | ||
| CDD | 239 | 313 | 75 | 9.03E-37 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v3182290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3182290.1, powered by CORGI.
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