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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1198850 |
| Transcript ID | Lj2g3v1198850.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Glycine max] gi|356502680|ref|XP_003520145.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | – | – | |
| PANTHER | 8 | 579 | 572 | 0 | – | |
| PANTHER | 8 | 579 | 572 | 0 | – | |
| CDD | 37 | 560 | 524 | 0 | – | |
| TIGRFAM | 39 | 561 | 523 | 1.90E-193 | ||
| SUPERFAMILY | 45 | 169 | 125 | 1.50E-62 | – | |
| Gene3D | 47 | 221 | 175 | 2.20E-33 | ||
| Pfam | 58 | 558 | 501 | 9.90E-99 | ||
| PRINTS | 62 | 88 | 27 | 3.10E-57 | ||
| PRINTS | 118 | 145 | 28 | 3.10E-57 | ||
| SUPERFAMILY | 176 | 231 | 56 | 9.46E-10 | – | |
| SUPERFAMILY | 218 | 410 | 193 | 5.76E-64 | ||
| Gene3D | 222 | 402 | 181 | 4.70E-71 | ||
| PRINTS | 302 | 325 | 24 | 3.10E-57 | ||
| PRINTS | 384 | 409 | 26 | 3.10E-57 | ||
| Gene3D | 403 | 554 | 152 | 6.20E-33 | ||
| PRINTS | 432 | 453 | 22 | 3.10E-57 | ||
| ProSitePatterns | 439 | 450 | 12 | – | ||
| SUPERFAMILY | 440 | 557 | 118 | 1.50E-62 | – | |
| Coils | 453 | 473 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Biological process | Protein refolding | The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones. |
Expression pattern of Lj2g3v1198850.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1198850.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.