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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0281140 |
| Transcript ID | Lj4g3v0281140.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CAS1 domain-containing protein 1-like isoform X1 [Cicer arietinum] gi|502141924|ref|XP_004504705.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 4 | 542 | 539 | 0 | – | |
| PANTHER | 4 | 542 | 539 | 0 | – | |
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 12 | 31 | 20 | – | – | |
| Phobius | 32 | 105 | 74 | – | – | |
| Phobius | 106 | 123 | 18 | – | – | |
| Pfam | 106 | 517 | 412 | 1.10E-98 | ||
| Phobius | 124 | 142 | 19 | – | – | |
| TMHMM | 141 | 158 | 18 | – | – | |
| Phobius | 143 | 162 | 20 | – | – | |
| Phobius | 163 | 182 | 20 | – | – | |
| Phobius | 183 | 199 | 17 | – | – | |
| Phobius | 200 | 204 | 5 | – | – | |
| Phobius | 205 | 227 | 23 | – | – | |
| TMHMM | 205 | 227 | 23 | – | – | |
| Phobius | 228 | 238 | 11 | – | – | |
| TMHMM | 239 | 256 | 18 | – | – | |
| Phobius | 239 | 254 | 16 | – | – | |
| Phobius | 255 | 259 | 5 | – | – | |
| Phobius | 260 | 281 | 22 | – | – | |
| TMHMM | 260 | 282 | 23 | – | – | |
| Phobius | 282 | 292 | 11 | – | – | |
| Phobius | 293 | 319 | 27 | – | – | |
| TMHMM | 295 | 317 | 23 | – | – | |
| Phobius | 320 | 338 | 19 | – | – | |
| Phobius | 339 | 359 | 21 | – | – | |
| TMHMM | 344 | 363 | 20 | – | – | |
| Phobius | 360 | 378 | 19 | – | – | |
| Phobius | 379 | 399 | 21 | – | – | |
| TMHMM | 384 | 401 | 18 | – | – | |
| Phobius | 400 | 410 | 11 | – | – | |
| TMHMM | 411 | 430 | 20 | – | – | |
| Phobius | 411 | 429 | 19 | – | – | |
| Phobius | 430 | 440 | 11 | – | – | |
| TMHMM | 437 | 459 | 23 | – | – | |
| Phobius | 441 | 460 | 20 | – | – | |
| Phobius | 461 | 479 | 19 | – | – | |
| TMHMM | 479 | 498 | 20 | – | – | |
| Phobius | 480 | 499 | 20 | – | – | |
| Phobius | 500 | 518 | 19 | – | – | |
| TMHMM | 518 | 540 | 23 | – | – | |
| Phobius | 519 | 542 | 24 | – | – | |
| Phobius | 543 | 547 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj4g3v0281140.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0281140.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.