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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1948640 |
| Transcript ID | Lj6g3v1948640.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Early-responsive to dehydration [Medicago truncatula] gi|357447203|ref|XP_003593877.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 496 | 496 | 0 | – | |
| PANTHER | 1 | 496 | 496 | 0 | – | |
| Phobius | 1 | 143 | 143 | – | – | |
| Pfam | 2 | 131 | 130 | 2.60E-27 | ||
| Coils | 61 | 81 | 21 | – | – | |
| Pfam | 142 | 413 | 272 | 5.50E-77 | ||
| Phobius | 144 | 174 | 31 | – | – | |
| TMHMM | 145 | 167 | 23 | – | – | |
| Phobius | 175 | 194 | 20 | – | – | |
| TMHMM | 188 | 210 | 23 | – | – | |
| Phobius | 195 | 216 | 22 | – | – | |
| Phobius | 217 | 235 | 19 | – | – | |
| Phobius | 236 | 256 | 21 | – | – | |
| TMHMM | 236 | 258 | 23 | – | – | |
| Phobius | 257 | 267 | 11 | – | – | |
| Phobius | 268 | 289 | 22 | – | – | |
| TMHMM | 271 | 293 | 23 | – | – | |
| Phobius | 290 | 340 | 51 | – | – | |
| Phobius | 341 | 372 | 32 | – | – | |
| TMHMM | 341 | 372 | 32 | – | – | |
| Phobius | 373 | 392 | 20 | – | – | |
| Phobius | 393 | 413 | 21 | – | – | |
| TMHMM | 393 | 415 | 23 | – | – | |
| Phobius | 414 | 418 | 5 | – | – | |
| Phobius | 419 | 439 | 21 | – | – | |
| TMHMM | 419 | 438 | 20 | – | – | |
| Phobius | 440 | 500 | 61 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj6g3v1948640.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1948640.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.