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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0011600 |
| Transcript ID | LotjaGi1g1v0011600.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alkaline alpha-galactosidase seed imbibition protein; TAIR: AT1G55740.1 seed imbibition 1; Swiss-Prot: sp|Q84VX0|RFS1_ARATH Probable galactinol--sucrose galactosyltransferase 1; TrEMBL-Plants: tr|G7K4U6|G7K4U6_MEDTR Galactinol-raffinose galactosyltransferase; Found in the gene: LotjaGi1g1v0011600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1418811..1423304) extracted from Lotus japonicus Gifu genome v1.2.
ATGACTGTGGGAGCAGGAATTTCTGTTTCTGATGGCAACTTGATGGTGTTGGGGAACAAGGTTCTGAGTCAGGTTCATGG CAACGTTCTTGTTACCCCTGCATCTGGTGGTGCTTTGCTCAATGGAGCATTCATTGGGGTTCAATCTGATCAAAAGGGTA GCCGCAGAGTCTTCCCCATTGGCAAACTTGAGTATGTTCTGTTCATTCTATCTCTATTAGAATTTTTCTGTTTTCATTTC TTGTTTCAGTTTCTACATGCATATGTGTTATGTTGTGAATCAGTGAATGAATATCAGAACATGAGTTCAAACTGTTCTGT TTTTTTATTCTGTAGTTTGTGGGGGAATGCTATATTTTTTGGCGTTTTTGTTTCAGGGGGTTGCGGTTTATGTGTGTATT TCGCTTCAAAATGTGGTGGATGACACAGAGAATGGGAAATTGTGGAAAAGAAGTTCCCATTGAGACGCAGTTCTTGCTTA TTGAAGCACATAATGGTTCTGATATTGATGGAGGGATCAACAATGGAGAAGACCAAGCTGGTAGTAGTAGTACCTATGCA CTTTTCTTACCTATTCTTGAAGGAGATTTCAGAGCAGTTATTCAGGGGAATGATCAGAACGAGATTGAGATCTGTGTGGA AAGTGGTATGTGGTGCTCAGAACACAACAAACTAGTCATTAATTTATTTCATACATGTCATTTTTTAAGAGGGAAGCCTC GGCACAACGGTAAGGTTGTGGCCATGTGACTTTGTGGTCATAAATTCGAGCCGAGTAATCACCCTCTTGCAAAGTGCAAG GAAAGACTGCCTTTATAAGGCCTCTCCTCCTAGGTCTCGCGCATAGCGGGAGCTTTATAACATCAAGTTTGTCCTTTTAT ATGTGATGATTTTTGGTGTTCTTAGAGTGATGGAAAAATGTGTTTGATTGCAGGTTGTCCTGATGTGGAGGAATTTGATG GGACTCATCTGATGTTTGTTGGGGCTGGATCAGATCCTTATGAAGTCATAACAAATGCTGTTAAGTAAGTTTGACCTTTC AATTATCCACCAATTACATAACTCTTTAAGCATTTTCCCCTCCTTTGTTTTTGTTTCAATGTTATGCCTTATTTTCAATT CATAAAGGTCTTAAGGCTTGGTGATTTCACTTTACTCTTTACTCTTTAGTTGTTAAAAGAATTGGTTTTCAAGTTCATTT CATTACTACTTCAACTTCTAATCTTCTGAAGTAATCAGAATTGGAACAATCTTCATTAGTCTAGTAATGTTTGTTTTAGG CTTTTAGCTTTAGCATGCTATTGGATATGCAGTGCTTCTTCTTTTAAATGTGCTTAAAACACAAGTCATTGATTTAATTT ATATCCAATTTTGATCAGGTCTGTTGAGAAACACTTGAAGACATTTTCTCACAGAGAGAAAAAGAAGGTTTAATATCTTT TCCCTCACTAAAATGAAAATATCATGGACTAACTTATTCTGAGTACTGAATCTCAAAGTTCATCACCTCTAATTTATTTC ATTTTTATTTTCCCACTTGTATTCAGATGCCAGATATTTTGAACTGGTTTGGGTGGTGTACATGGGATGCTTTCTATACT AGTGTCAATTCAGAGAATGTGAAGCAAGGATTACAAAGGTGCTACTTCTTTCCAGGAAAATGGTCCAAGTTATAAGTTTT AATATGCATCCCATAGACATTAATTTGTGACCATTACTTTTTCATTGTTTTGCAGTTTTGAAAAAGGTGGAATTCCTGCT AAATTTGTTATAATTGATGATGGATGGCAATCTGTTAGCATGGACCCTAATGGCACTGAATGGAAAGCTGATAATGCAGC CAAGTGGGTACTTTTTTCTAAGTTTCATGATCAGATTGTAGTTTCATGTATGTTTGGAAACTTGGTAGATTTCTACAATA GGAGCAGAAGTGATTGTGAGAGAAGCTACATAGCTTTTCTGAGGGATAAAGTGATTCTAAAAAGTTTAAATGTGAAATCA AACATATTATTTATAAGGATGAATTACCAGATTGTAGTGCATGTTTGTTATCACCATTGACACAGAGTGCAAGACACTGA GAAGCTATGACTTGTAGCTTCTACGCATAAATGATTTAGAGCAGTTGACTATTAACCAAACATGCTAGTAGTTTCATACA TTTTCTAACAATGAATTATTATAATTATTTTCCTTTTTCTTTTCCAACAGCTTTGCAAATTGCTTAACACATATCAAAGA GAATCACAAATTCCAGAAAGATGGCAAGGAGGGTCAGCAGGTAGAGGATCCAGCTATGGGACTTCGTCACATTACCAATG AAATCAAACAAGAACATGCCATAAAGTATGACATTTTCATTTTCTCTCTTGTGTTTCTTCAATGTTTCAGGATATCTAGT TTACACATGTTCATGATCTTTGGATCCCCTTTCAATTTTTCAGGCACGTGTATGTGTGGCATGCAATAACAGGATATTGG GGTGGTGTGAAACCTGGTGTTACAGGCATGGAGCACTATGAGTCAAAAATGACCTTCCCTGTCTCATCTCCTGGAGTAAA ATGCAATCAAGAAGATGAATCTTTAGATACCATGACCATCAATGGGCTTGGGCTTGTGAATCCTGAGAAAGTTTTTCACT TTTATGATGAACTTCACTCATATCTCGCATCTGCTGGTATTGATGGTGTCAAAGTTGATGTTCAGAACATCCTTGAAACT CTCGGCGCAGGACATGGTGGGAGGGTAAAACTTGCAAGGAAATACCACCAGGCACTGGAGGCCTCAATCTCTAGGAACTT CCCTGATAATGGAATCATATCTTGCATGAGTCACAACACTGATGGATTGTACAGGTTGAGATTGCTTATAAAACTATAGC GAATGATTTTATGAACATTCCTCTAGATTTGTATATCAATAAACATAAACAAGCCTTATCCCACTTAATGACATCGGCTA TATGGATACCATGTCATATTAAAAATACGGCGAGTTTTATGTTTACTGCCGCATGCCTAACACGAAATTCCCTTTGTGCA GTGCAAAGCGTTCAGCTGTTATCAGGGCTTCAGATGATTTCTGGCCTAGGGACCCTGCATCACACACTATTCACATTGCT TCTGTTGCTTACAACACTATTTTCCTTGGTGAATTTATGCAGCCAGATTGGGATATGTTTCAGGTAACTAGTCAAATATT GGACCATCTCTATTTATATCCTCCCCCCAAAAAAAAATGTACATACTTCTCTATAAGCAAATTAACTTGGATTTTTTTAT GCATAATAGAGCTTACATCCGATGGCTGAATATCATGCTGCTGCTAGAGCAGTAGGAGGTTGCCCTATTTATGTCAGGTA ATGAATGGTGATAACACTTATTTTTCCCCATACTTTGAAACTGAATCAGATTAATGATATCTACCACTTCAACTGGTCGG GGTTGTTCTAGTTTAAACGGAGGTTTCGGGTTGAAGCTCTTGTCGATGCAACTGCATTAAACAAAAATAATCAATGGTAT CTTACATTAGGATGTTGTTATATTGTGCAGTGACAAGCCAGGACACCATGACTTTAATCTTTTGAAGAAGCTTGCACTTC CTGATGGTTCTATTTTGAGGGCTAAACTTCCAGGAAGGCCAACTAAGGATTGCTTATTTTCTGATCCTGCCAGAGATGGA AAGAGGTAAAAACAAATCCAAAATGATCTAGTTACCTAATTATATATATTTGACCAATTGATATAGTAGTAGCTTGTTCT TTATGTGTTTTTCTTAACTCGTTCAATGCTGCTTTTGCAGTCTTCTGAAGATATGGAACATGAATGAATTTTCCGGAGTA GTAGGTGTTTTCAATTGCCAAGGAGCTGGGTGGTGCAAAGATGGAAAGAAGAACCTTATCCATGATGTGAGTCCAGGCAC AATCACTGGTATCATTAGAGCTAAAGATGTTGACTATTTACCAAAGGTTGCAGATGATAAATGGAATGGGGATTCCATTG TATTTTCACATGTTGGTGGTATGTTGTTATTCTTGACATAACACTTTCAAACCATGCAAAAGTTCATAAAATTTCTTTTC GTATAATGGTTTTTTGTTTTTATATGCAAATTTGCAGGAGAAGTAATTTACCTTCCAAAGGATGTGTCTATCCCTATTAC CTTGAAATCAAAAGAATATCAAGTTTTTACAGTAGTTCCCTTGAAGGAGTTAGCAGATGGTATCAAATTTGCACCTATTG GTTTGATCAAGATGTTCAATGCAGGAGGGGCTGTTAAAGAGTTCAGTTTGGGGTCTAATGGAAGTAAAAATGTTACCATG AAAGTGTGTGGTTGTGGTCAGTTTGGTGCTTATTCATCAACTAGGCCTAAGTTAGTTACAGTTGATTCAGAAGAGGTGGA ATTCAAGTATGAGGAAGATTCTGGTTTGGTGATCATTGATTTGAGAGTGCCAGAAAAAGAGTTGTACCAATGGAGCATTT CCGTTGATTTGTGA
CDS sequence (LotjaGi1g1v0011600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCTGATCTATGCACTTTTCTTACCTATTCTTGAAGGAGATTTCAGAGCAGTTATTCAGGGGAATGATCAGAACGA GATTGAGATCTGTGTGGAAAGTGGTTGTCCTGATGTGGAGGAATTTGATGGGACTCATCTGATGTTTGTTGGGGCTGGAT CAGATCCTTATGAAGTCATAACAAATGCTGTTAAGTCTGTTGAGAAACACTTGAAGACATTTTCTCACAGAGAGAAAAAG AAGATGCCAGATATTTTGAACTGGTTTGGGTGGTGTACATGGGATGCTTTCTATACTAGTGTCAATTCAGAGAATGTGAA GCAAGGATTACAAAGTTTTGAAAAAGGTGGAATTCCTGCTAAATTTGTTATAATTGATGATGGATGGCAATCTGTTAGCA TGGACCCTAATGGCACTGAATGGAAAGCTGATAATGCAGCCAACTTTGCAAATTGCTTAACACATATCAAAGAGAATCAC AAATTCCAGAAAGATGGCAAGGAGGGTCAGCAGGTAGAGGATCCAGCTATGGGACTTCGTCACATTACCAATGAAATCAA ACAAGAACATGCCATAAAGCACGTGTATGTGTGGCATGCAATAACAGGATATTGGGGTGGTGTGAAACCTGGTGTTACAG GCATGGAGCACTATGAGTCAAAAATGACCTTCCCTGTCTCATCTCCTGGAGTAAAATGCAATCAAGAAGATGAATCTTTA GATACCATGACCATCAATGGGCTTGGGCTTGTGAATCCTGAGAAAGTTTTTCACTTTTATGATGAACTTCACTCATATCT CGCATCTGCTGGTATTGATGGTGTCAAAGTTGATGTTCAGAACATCCTTGAAACTCTCGGCGCAGGACATGGTGGGAGGG TAAAACTTGCAAGGAAATACCACCAGGCACTGGAGGCCTCAATCTCTAGGAACTTCCCTGATAATGGAATCATATCTTGC ATGAGTCACAACACTGATGGATTGTACAGTGCAAAGCGTTCAGCTGTTATCAGGGCTTCAGATGATTTCTGGCCTAGGGA CCCTGCATCACACACTATTCACATTGCTTCTGTTGCTTACAACACTATTTTCCTTGGTGAATTTATGCAGCCAGATTGGG ATATGTTTCAGAGCTTACATCCGATGGCTGAATATCATGCTGCTGCTAGAGCAGTAGGAGGTTGCCCTATTTATGTCAGT GACAAGCCAGGACACCATGACTTTAATCTTTTGAAGAAGCTTGCACTTCCTGATGGTTCTATTTTGAGGGCTAAACTTCC AGGAAGGCCAACTAAGGATTGCTTATTTTCTGATCCTGCCAGAGATGGAAAGAGTCTTCTGAAGATATGGAACATGAATG AATTTTCCGGAGTAGTAGGTGTTTTCAATTGCCAAGGAGCTGGGTGGTGCAAAGATGGAAAGAAGAACCTTATCCATGAT GTGAGTCCAGGCACAATCACTGGAGAAGTAATTTACCTTCCAAAGGATGTGTCTATCCCTATTACCTTGAAATCAAAAGA ATATCAAGTTTTTACAGTAGTTCCCTTGAAGGAGTTAGCAGATGGTATCAAATTTGCACCTATTGGTTTGATCAAGATGT TCAATGCAGGAGGGGCTGTTAAAGAGTTCAGTTTGGGGTCTAATGGAAGTAAAAATGTTACCATGAAAGTGTGTGGTTGT GGTCAGTTTGGTGCTTATTCATCAACTAGGCCTAAGTTAGTTACAGTTGATTCAGAAGAGGTGGAATTCAAGTATGAGGA AGATTCTGGTTTGGTGATCATTGATTTGAGAGTGCCAGAAAAAGAGTTGTACCAATGGAGCATTTCCGTTGATTTGTGA
Protein sequence (LotjaGi1g1v0011600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLIYALFLPILEGDFRAVIQGNDQNEIEICVESGCPDVEEFDGTHLMFVGAGSDPYEVITNAVKSVEKHLKTFSHREKK KMPDILNWFGWCTWDAFYTSVNSENVKQGLQSFEKGGIPAKFVIIDDGWQSVSMDPNGTEWKADNAANFANCLTHIKENH KFQKDGKEGQQVEDPAMGLRHITNEIKQEHAIKHVYVWHAITGYWGGVKPGVTGMEHYESKMTFPVSSPGVKCNQEDESL DTMTINGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGIISC MSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFQSLHPMAEYHAAARAVGGCPIYVS DKPGHHDFNLLKKLALPDGSILRAKLPGRPTKDCLFSDPARDGKSLLKIWNMNEFSGVVGVFNCQGAGWCKDGKKNLIHD VSPGTITGEVIYLPKDVSIPITLKSKEYQVFTVVPLKELADGIKFAPIGLIKMFNAGGAVKEFSLGSNGSKNVTMKVCGC GQFGAYSSTRPKLVTVDSEEVEFKYEEDSGLVIIDLRVPEKELYQWSISVDL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 1 | 17 | 17 | - | – | |
| Phobius | 2 | 12 | 11 | - | – | |
| Pfam | 4 | 490 | 487 | 9.8E-232 | ||
| PANTHER | 4 | 490 | 487 | 0.0 | ||
| PANTHER | 4 | 490 | 487 | 0.0 | – | |
| Phobius | 13 | 17 | 5 | - | – | |
| Phobius | 18 | 612 | 595 | - | – | |
| Gene3D | 83 | 164 | 82 | 4.0E-8 | ||
| SUPERFAMILY | 84 | 414 | 331 | 1.64E-58 | ||
| PANTHER | 487 | 611 | 125 | 0.0 | ||
| PANTHER | 487 | 611 | 125 | 0.0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi1g1v0011600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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