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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0067200 |
| Transcript ID | LotjaGi1g1v0067200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 1-aminocyclopropane-1-carboxylate oxidase; TAIR: AT1G05010.1 ethylene-forming enzyme; Swiss-Prot: sp|Q9MB94|ACCO_PRUMU 1-aminocyclopropane-1-carboxylate oxidase; TrEMBL-Plants: tr|A0A0L9UW87|A0A0L9UW87_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0067200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:9263125..9265521) extracted from Lotus japonicus Gifu genome v1.2.
TAGAAATCACCTTCACATGACCCAAAAATAAACTTCCAAGAGAAAAGAAAACTCGAGAAGTGAAAGCTGGAGGTGGCAGC TTGTGTGGTCAAATTTTCAAGAGGACAAATCAGCCTCCCAAAGTGGGTCCAACCTATACCAAGTGGAAAGACAATTCAAC TACGGAACCAAAACAAACGTTCTAGCTGTGACTTCAACTATGGTTAAGACCAAAAAGCAGTTTACTTCAATCTATTGCAT GCAAATTTTAAATGACATTTTAACTTTTAATTTTCCCTGGTTGGTCCTAACTAATCTAAAGCTCTATAAATACCCCCCTT AGCAAACTCTAATGTGCATAAACCCCTAAGCAATATAGAAAGAGCAAGTAGAAAAAAAGATTATAAGTTAAGAAATGGCC AACTTTCCAGTGATCAGCTTGGAGAAGCTCAATGGTGAGGAGAGAAAAGATATCAAGCTGCAAATAAAGGATGCTTGTGA GAACTGGGGATTCTTTGAGGTACCTTGTTGATTTCTACATTGCCCTCCAACTTATCTGTGTTTTAATTTCTTTTAGTTCT TGTGATTTTCTAGCTGACTCTGCTTATTCTTTGCTTTCAAAACTCTAGCTGGTGAATCATGGCATACCCCATGACGTAAT GGACACTGTGGAGAGGTTGACCAAAGAGCACTACAGGATATGCATGGAACAGAGGTTCAAGGAATTAATGGCAAGCAAAG GCCTAGAGGCTGTCCAAACTGAAGTCAAAGATATGGACTGGGAGAGTACTTTTCACCTGCGCCACCTCCCTGAATCAAAC ATTTCAGAGATCCCTGATCTCACTGACGAGTACAGGTTACACACAACAAAAAAACATTTATGAGATAACACATTGCATGA CATATAATACAAAAATTCACAAATAATTGATACAGAATCAGGTCTAATCCGAATTCTAAGATGGTATCAAAACTTATACT AGAGATGTGACCAATAGAGTCTCTATAAAGGGTAGAACAATCATCACTTATGAGCTAACTTTTGGCCTAACATGAATTCT AAGAGATTATGAGTTGAACTCCAATCCACATAGGAGCAGCATTTGTTGAGTTTTGAACACTGTTTCATATATGATTTTAC TTTCACTAGTATCTACAAACAACCAAATAATGGATTAAAAATTAAAAATACAAGATGGACACATGTGCATTCTAAAGTAA AACTGCAGCTGTATATTTCACTTCCCAAAGATTCTAAATTACTCAAGGTAATGATGCAGGAAGGTGATGAAGGACTTTGC TTTGAGGATTGAGAAGCTATCAGAGGATCTGTTGGACTTATTGTGTGAGAATCTTGGACTGGAGAAAGGGTACCTCAAGA AGGCCTTCCATGGATCAAGAGGACCAACTTTTGGCACCAAGGTTGCCAACTACCCTCCATGCCCCAAGCCAAACCTGGTG AAGGGTCTCCGCGCCCACACCGACGCCGGCGGGATCATCCTTCTCTTCCAGGATGACAAGGTCAGTGGCCTGCAGCTGCT CAAAGATGGCGAGTGGGTGGATGTTCCCCCAATGCGCCACTCCATTGTTGTCAACCTTGGTGACCAGCTTGAGGTAAATT CTCTCTTCCTATGCCTTATAGACATTTCCACAAACAGGTTATGTGCAAAATCATGACCCTTATCAAATGGGAACAACAGG TGATCACCAATGGGAAATACAAGAGTGTGGAGCATCGTGTGATAGCACAAACTGATGGGACCAGAATGTCTATAGCCTCA TTCTACAACCCTGGCAGTGATGCTGTCATCTACCCTGCTCCAGAATTGTTGGAGAAAGAGGCAGAGGAGAAAAACCAGCT CTACCCAAAATTTGTTTTTGAAGATTACATGAAGCTCTATGCTGGATTGAAGTTTGATGCCAAGGAACCAAGATTTGAGG CCCTGAAAGCATCACCAAATGTGACTCTAGGTCCAATTGCCACTGCTTAAAAATGTTTCACCATATATATATTATAACTA CAATTAATCAATGATGTTGTTTGCATTGGAAGCTAGAGCCACATGTTTCTCATATCATATGGATATACTAATTATTATAT TTGATGTAATGTTTCTGAAGTGATTCTATTTCATTGTACTGTATATCATATTTCATAATGAAAATAATTAGTTGATTAAG TAAGAATATTTATTGCCTCTTGGCTCTATGTTCTCCTTAGTCCTTTCCTTTTCCATGCTCTGCTGCACATGAGATCCAAA TTGTACTATTGGGTTGTGCTGTGGAGGACCACCAATTATAGTGTCTGTGTCAGTGTAAGATTAAATGAATGTGTGTTAAT GCCATGATGATTTCTTGGAGAGACTAAGTCAAGACAGTTGCTGGAAATAGTGCAGGCCTAAGTATGTGGGGATCCAA
CDS sequence (LotjaGi1g1v0067200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAACTTTCCAGTGATCAGCTTGGAGAAGCTCAATGGTGAGGAGAGAAAAGATATCAAGCTGCAAATAAAGGATGC TTGTGAGAACTGGGGATTCTTTGAGCTGGTGAATCATGGCATACCCCATGACGTAATGGACACTGTGGAGAGGTTGACCA AAGAGCACTACAGGATATGCATGGAACAGAGGTTCAAGGAATTAATGGCAAGCAAAGGCCTAGAGGCTGTCCAAACTGAA GTCAAAGATATGGACTGGGAGAGTACTTTTCACCTGCGCCACCTCCCTGAATCAAACATTTCAGAGATCCCTGATCTCAC TGACGAGTACAGGAAGGTGATGAAGGACTTTGCTTTGAGGATTGAGAAGCTATCAGAGGATCTGTTGGACTTATTGTGTG AGAATCTTGGACTGGAGAAAGGGTACCTCAAGAAGGCCTTCCATGGATCAAGAGGACCAACTTTTGGCACCAAGGTTGCC AACTACCCTCCATGCCCCAAGCCAAACCTGGTGAAGGGTCTCCGCGCCCACACCGACGCCGGCGGGATCATCCTTCTCTT CCAGGATGACAAGGTCAGTGGCCTGCAGCTGCTCAAAGATGGCGAGTGGGTGGATGTTCCCCCAATGCGCCACTCCATTG TTGTCAACCTTGGTGACCAGCTTGAGGTGATCACCAATGGGAAATACAAGAGTGTGGAGCATCGTGTGATAGCACAAACT GATGGGACCAGAATGTCTATAGCCTCATTCTACAACCCTGGCAGTGATGCTGTCATCTACCCTGCTCCAGAATTGTTGGA GAAAGAGGCAGAGGAGAAAAACCAGCTCTACCCAAAATTTGTTTTTGAAGATTACATGAAGCTCTATGCTGGATTGAAGT TTGATGCCAAGGAACCAAGATTTGAGGCCCTGAAAGCATCACCAAATGTGACTCTAGGTCCAATTGCCACTGCTTAA
Protein sequence (LotjaGi1g1v0067200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANFPVISLEKLNGEERKDIKLQIKDACENWGFFELVNHGIPHDVMDTVERLTKEHYRICMEQRFKELMASKGLEAVQTE VKDMDWESTFHLRHLPESNISEIPDLTDEYRKVMKDFALRIEKLSEDLLDLLCENLGLEKGYLKKAFHGSRGPTFGTKVA NYPPCPKPNLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVEHRVIAQT DGTRMSIASFYNPGSDAVIYPAPELLEKEAEEKNQLYPKFVFEDYMKLYAGLKFDAKEPRFEALKASPNVTLGPIATA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 317 | 316 | 5.4E-125 | ||
| SUPERFAMILY | 3 | 302 | 300 | 3.5E-97 | – | |
| PANTHER | 3 | 297 | 295 | 1.5E-160 | – | |
| PANTHER | 3 | 297 | 295 | 1.5E-160 | – | |
| Pfam | 5 | 96 | 92 | 8.8E-14 | ||
| ProSiteProfiles | 153 | 253 | 101 | 14.258 | ||
| Pfam | 159 | 253 | 95 | 1.5E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0067200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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