Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0099500 |
Transcript ID | LotjaGi1g1v0099500.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Armadillo repeat-containing protein 7; TAIR: AT5G37290.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q3UJZ3|ARMC7_MOUSE Armadillo repeat-containing protein 7; TrEMBL-Plants: tr|A0A1J7G0B2|A0A1J7G0B2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0099500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:15156849..15161997) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTATATTTGCAGCCAGACCCCACTTACTCCTCTCTCTCACACACTCACAGACACGCAGTCACGCTCTCACCCTCTCA CTCACGATTCACGCTCGCTCACCAGTCCACGCTCTCACCCTCTCGCACGGCGCACCACCACCACCGGTCACCACCACGCC ACGCCACCACCGTCCACCAGTCCAGCCGCCCGTCTGCTGCGGCTCTACCCTAGGTATGGCTGATTTCCCTAACCCTAAAT TGATTTCCTTTCTCTTCTCAAGCTTGATTTTGATGACATGTTTGGTGATTTGGTCATAATCGTAGCCTTAGACTACTCAA ATCCCTTCTACCCATCACCTTAGCTTGATTCTCACTTTGTATTTTGTAGTATATATTTGTGTATTTTTGCTATAATCATA GTTTTTAGATGTTCTCAGTTTATGAGGCAAGAGGGGTTTTAGTAAGGTTATGTTCTTTGCAAAGAAATTTTGAAATTCTA CTCTGGGAAACCAAAATTTGGGCTTGGGAGTGTAAGCTGTAAGGTACCAGACCAAGTTTAGGGAGAGAGAGTTTGCACAG GTCCTTGACAAAACATAATTTTCTGAAGTCCCTTCCTAGATGCATTTACACGTGTTGATTTGATAAATAGAGTACGAACC AAGAGAAAAAAGGTGCTGTGATGAAAATAACAATACTTTCATTCAATACTCATAGACATAATGGTCCAATTGAGTAGATT TGGTAAATTTGTCAAATGAGTTTGTAGTACTTTGAACTGATTGAGTTGTATAATTTTTGTTTTTCTTACTCATATAAAAG ATCCCACAAACCCAAGAATCTGCCTGGAGAGCCTATGATTGTGGTTGGAAGTATCCCTAAGTTTTGTTTTTTTTCTGATG GTGAAGAGGTTTTTCTGGGTACAGATCGTTGTTGCTGTCATGAAGTTACAAATATGAGTTGTTTGTAGGCCTGAACTCTG TAGCTTCATGGTTTTTGCAAGAGACAAGGGTCTGGTAATTGTTTTGCTGTCAATTGGAGGCTGAATTGCTTTTCAAGGCA TGTAGCCAAGTAAAGGAGATTGCAGAGGCTGAGTTTTTGCAATAGGAGACTAGGAGTGGTGGGATGTTTTTATTAATTCT GGTGGAGTTGTTTAGCTCTGTTCTGAGCCTTTTGGCTATTGATGTTTTTCGTTTCTATGCTTTGTGTTAAGTGCTCAACT TTGGTTTTCTTATTCTTGTACATTGTATAGACTTTTGTCTTTTTGGGTACCCCTAGTACTCTCATTCAATACATTTAGCT TATCCAAAAAAAAACAGTTGTTTTTAATTATATTTTTATCGATGTACTGATTTGAAAATTTTGAACCCCCTGACCCCGGG GTCCTGGATCCGCCACTGCGCGTACACACATTTAATCCTTATTATTATTTGGTGGATATATTTTATATAATGCCCCAAAC CCAAATTCATTCACTTTTATTGACTATAGACTAGAAGAACAACATAAATGTTCACCAATGACCATAGGCAACAAGAGAGA ACAGGAAAATATGGAACTCCCAGATTGCAATACCTTCAGGTGCTTCTTCATTTCTTTCTCTCTAACTAATGAAATCATTT TTTTTTTTGTAATTCAGTAATATACACCATTATGTTGTATGTGTTGCAACTTGCAATTATTTGGTTTCATATGAGAACCT AAGATGAATAACATATGAAATCAATTTTTTTTTGTAATTCAATAATGTACCATTATGTTGTATGTGTTGCAATTATTTGG TTTTGTATGAGAATCTAAGATGGATAACATTTTTTTCAGGAACTGGTGACTCAGTTTCAGAATGCTTCTGAGGAGGGTAA ACTGTTTTTGTATATTAATATTTCCTGAATGAAGCACTCTTTAAATCAAGCACCTTTGTTTATAGATTGTTTAATTCTAC TATCTCATTGTTTGATGGTGTGTTTCTTGTGTTTCCAGAAGCAAAAGAGAAGATTTTAGCGAATTTGGCCAACTTCGCTT ATGATCCTTACAACTATAACTACTTACGTCAGGTATGGACCCATTAGCTTCATTTACAAGGAAAGAAAAGTGCGCGGGAT GAACTAAGATGTCTTTGCTTAACTTTGCAGCTCAATGTTTTGGAACTTTTCCTTGACTGCATAACTGAACCCAATGAGAA GCTAATAGAATTCGGTATTGGAGGGGTCTGCAATTCTTGTGCTGGTAATTCTTGTTCCGTAATATTGTGGTTTCTACACC TCTACTTGATTAATTGTCTTTGATTAATAAAAATAAGTAACAATTTTTTTGCAGATCCAGCTAATGCAGCAATTGTAACT AAGGTTGATGGGATACCTCTTATCATTCAATGTTTATCAAGCCCGGTCAGAAACACTGTAAGGATATGAACTTGCTTATT GACATTGTTTTCCTTTGTTCATTCATGATTATGTTTGGCTCTTAAGTTCCAGACCCTAGAGCCTCTAGCCTAAAGGGATT GCTAAACCATGAATAGCGATAAATTGCTTTTAGATATCAGTTTTCCCCTCGACAAGTTATGCACATGTATGATTTACGTT ACTTACTTCATCAATAAATGTTAAAGCTTATATGTGAAAAAAAAAACTATCTGATTTTTCATATGAAATTTAAATATTTA AAACATGCTTGCCTTTCTATTTTCCATTTTTTTATTTTGGAGAACATTCTATTTTAATTATATCCTTTATAATTACTGAA CTCACTTTACTACCATTTTCAAGGAAATTTGCATTAGCAGTTTCTACTATTCTTGGGCTATGGTTTGTACAATAAAAGAT ATTACCCTTTAGATTTCTCTAGGTAGCCAATGAAGTAACCACTCACTGGTCGAGGATCTAACTTCTTTTCATGTGGATTA TATACTCTTGCTTTTGCTAGACAACCTCAAACATGCAAGTGCCTTAAACTAGGTTTTCTGTCAGTCCACAACTCAAAAGG ACTTTTAGGACCTGCCTCAGTAGGAACCTCTTTAACAAAGACAACAGTTTTTAATGCATGTATGATGTATCCACAAAAAT TTGTGTATAGAAAAATTACTCATGATACTTCTAACCATATCCAACAATGTTCTATTACACCTTTCTGCCACAATTTGTTG TGGAATTAAGCGTAACATGCTTAATGAAAGTTCCCCATACTTGTGGCATAAATGTCCAAGGGAAGATTAGTAAAGAATGT GATTCTACCAAATCTAGATTTTACTGATCTTGGTTGTGTGTGGATTGCATTAAGGGAAAGCAAACCAAATACAAAGAGAA ATGCGCCATAAGAAGTTAATGCTGTTGAGGTCTATATCGACAAGTTAAAGTCGAAAGTCCTGATTGGCATGGTGAATATT ATGGAAAACATGATGAAATCCTGTTTCATTTGCAAAACTTCTAGAAAGGCATGACATTGTTGGTAGTTTAATTATATCCC TTATAATTACTAAACTCACATTAATATCAATGCATTCTCAACATTGCTTCTGATAATTACAGAGTAAATAATGTTTTCTT ATATTATCTGTACATTCTAAAGTTGATTTATGGCCATATAACCGTTCATTACAAGTTAATAAACAACCAATGCATTTACC TGATTTTAGGTAAATTCTGCACTTGGAGCACTTTACTATGTCTGTGATGAATCTAACAAGGAAGAGGTTTTAAAGCCTGA AGTTATTGATGTCATCAAGAGGTATGCTGCAGCTGAAGAAGTTAGCGTGAGCTTCAGTAATCTGGCTAAAGCATTTCTGG ACAAACATTTATCAGGGTACTAGTTTGAGACACTTTACCATTCCATACTTATTTGAGACAAAATATCTTGTGTGAGGCTA CTTTGTACCCGTTTGGATGCAAAAGAACACTTATTGAAGCTTATTTAGTGCTTTTTCTAGTAAATAAGCTCCAATAAGCT CTAATAAGCATGTATGCAGACGGGTTCTTTGTTGCTCACAATTTAGATTACACACCCCAGTGCACCACACTCCAATCCCA GTTCTCTAGTTGCTTATTGAGACTGAGTCTCTGACCTAGATCATGTGCTTTACTAGATGTTGATTGCACTCACACAAAAG ACAGAACCATAATGTAAGTGTGGAACCAAGTATTTGATCATATAAGTAGCTGAAGAGAGGAATATTGACCGTTCTCGCCA TTTTCTTTTGTAAATTGACATCTTTTCCTTATGATGGTGTAGATATTGTGTGGAAATTATATATGAAGAGATTAGTTTGT TGTCAAAATACAAATGTGAAAAATTCAAAACGATGCTTGCCCTCTTTAGTGTGCTGAAGCCATTTTTTTGGTACATAGGA ATGTATGTGTTGAAGGCATTTGCACCAGTCACTAGTGTATGACTATGAGAGTAATGTAGGAATATTTATAATTTCATGCT GGATTATCAAGCTTGAAACATATCTTTTGTGCATTTAAATGTTAAAATTAGCAACTGATGCTTTAGATGTCCGGAAGCGT AGTCATGTTGCTTGAAGATGAAACTGAACCACGGTGGTTCAATTTTTTACTGACAACATTGAAAAAAGGTTGTAACCTAC TGTTGCTAAAGGTCTGCCTCTGTCTTTTATATATGCTTTTCATTGAGCCTAATATGAGTGTCCTGGGCTATTCTCTCTTA AGATAAGAGATGGGAGCTCAAAGGTTGTTTTTCTTGTGCAACATCATTGCTCTTCTCAAGTTCCAATTAGGTTTTTAGCG TTGGTCTTTTTTATCCCTCGATGATGCGGTATGTTAGTGGTTGGTTTGTTTCATTAGAGCCTTATTTTTCTGGGGCTGGA ATCTCTGTTTTGAGTTGGATTTTTGGTTTTTATGTAATTATGTGTCTTTTTTTATGTGTCTTTTTTTCTTTCTTTCTCGA GATTACTTATCTAGTGAGGTCTGTATTTGTCACTTCAAGCTCACTTGAGAGAGCCTATTCTCAAGTTTATATATTTATAA TATCTAGTTCTGTTTAAAAAAAGAAAAACTTGATTATCAAAAAAAAAAAAAAACGTGTACCATGTTCTGGGCGAAGCAAA TAGAGTAATGTATTGCTCATATTGTGGATAGAAGATTCCTCATGAATATTGCATAGAGTGCAAAGAGCACCAGTAGGCAT ATCCTTATTGCTTTTTTTTTTTCCTTAGT
CDS sequence (LotjaGi1g1v0099500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCACCAATGACCATAGGCAACAAGAGAGAACAGGAAAATATGGAACTCCCAGATTGCAATACCTTCAGGAACTGGT GACTCAGTTTCAGAATGCTTCTGAGGAGGAAGCAAAAGAGAAGATTTTAGCGAATTTGGCCAACTTCGCTTATGATCCTT ACAACTATAACTACTTACGTCAGCTCAATGTTTTGGAACTTTTCCTTGACTGCATAACTGAACCCAATGAGAAGCTAATA GAATTCGGTATTGGAGGGGTCTGCAATTCTTGTGCTGATCCAGCTAATGCAGCAATTGTAACTAAGGTTGATGGGATACC TCTTATCATTCAATGTTTATCAAGCCCGGTCAGAAACACTGTAAATTCTGCACTTGGAGCACTTTACTATGTCTGTGATG AATCTAACAAGGAAGAGGTTTTAAAGCCTGAAGTTATTGATGTCATCAAGAGGTATGCTGCAGCTGAAGAAGTTAGCGTG AGCTTCAGTAATCTGGCTAAAGCATTTCTGGACAAACATTTATCAGGGTACTAG
Protein sequence (LotjaGi1g1v0099500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFTNDHRQQERTGKYGTPRLQYLQELVTQFQNASEEEAKEKILANLANFAYDPYNYNYLRQLNVLELFLDCITEPNEKLI EFGIGGVCNSCADPANAAIVTKVDGIPLIIQCLSSPVRNTVNSALGALYYVCDESNKEEVLKPEVIDVIKRYAAAEEVSV SFSNLAKAFLDKHLSGY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 175 | 175 | 2.6E-96 | ||
Gene3D | 15 | 171 | 157 | 2.2E-14 | ||
SUPERFAMILY | 21 | 153 | 133 | 1.46E-18 | ||
SMART | 52 | 92 | 41 | 22.0 | ||
SMART | 93 | 133 | 41 | 0.25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0099500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…