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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0115700 |
| Transcript ID | LotjaGi1g1v0115700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cinnamoyl-CoA reductase-like protein; TAIR: AT5G58490.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|A0A0R0LA35|A0A0R0LA35_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0115700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:18145186..18147395) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCCGAGCACGTTTGCGTCACCGGCGGCAGTGGCTGCATCGGTTCATGGCTGGTCCATCTCCTCCTCGATCGTGGCTA CACCGTTCACGCCACCGTCCAAAATCTCAGTTACCTTCCACACTCCATTATTTCACCACCATCAACACAACCTTTCTATT CTAACTCACTCTTTTCCTTTGTTCTCAAAACCAGACGATGAAACCGAGACGAAGCATCTACAATCTCTCGAAGGAGCATC CACTCGCCTCCGCCTGTTCCAGATCGATCTCCTCCACTACGACACCGTCCTCGCCGCCGTCAACGGCTGCGCCGGCGTTT TCCACCTCGCCTCTCCTTGTATTGTTGATCAAGTCCATGACCCTCAGGTACTCTTGTGCTTCTTCTGAAATCTTAAATCT TTTCCTCTTTTTCGTGGACCCTTTTGGGATCTGAAGCTGTTGGGTTTGTGCAGAAGGAGCTTCTGGACCCGGCGATCAAA GGGACTGAGAATGTTCTTGCTGCGGCGAAGGAAGCAGGAGTGCGGCGCGTGGTGGTCACGTCCTCTGTTTCTGCGATTAC CCCGAGCCCCAGTTGGCCTTCTGATGTTGTCAAGAGAGAGGATTGCTGGACTGACATTGAATACTGCCAGCAAAAAGAGG TTTGCAATTGCATGTGATAGTGTGTTGTTTAGTGTGTGAGGCATTGAATTTGGCATTTTTGAAATTGTTTGGTGCAGTTG TGGTATCCAATGTCAAAGACATTGGCAGAGAAAGCTGCTTGGGATTTTGCTAAAGAGAATGGTTTGGATGTTGTGGTGGT GAATCCTGGTACTGTAATGGGCCCTGTTATTCCACCAAGGCTTAATGCAAGCATGGTCATGTTAGTGAGACTTCTTCAAG GTAAGTATAGGTTGCTAATATTGATAAGGCGATTGTTTGCGAATTGCTATTTGTAGTTGTGTTGAGTGAAGTAGTATCTT TGATCTTAGGTGTGGTTTACTTGCTTTTTTCACTTTTCCATGTGATATTTTGCTGTGTTAATTGTGGAAGTCACTTAATT AGTGCAACTGCTAAATTGTCACCCAAGTAGATGGTAAAATAGGACATTCAGAACTTGATTTCTTGTTTATCTTGCGCCTT TTGAAGATTGTCTTCTTTGGTTGTGCTAAAGTCTTTTCATAATCATTTTACGATTTGTTAATAATCATTGTTGGCCCAAA TACTAATGTTGAAGCTTGTATGTCAGTAGTTCAGTATTCCCAATTTTTTTTTTAGGGTGTTTCTAAGTATTGTGATTTTG TCTTTGTCCTGGTGCAGGTTGTGCTGAAACATATGAGAACTTCTTTATGGGATTGGTCCACTTTAAAGATGTAGCATTGG CACATATTTTAGTGTATGAGAACAAAGGAGCAGCTGGTAGACATATGTGTGTAGAAGCTATTTCTCACTACGGCGACTTT GTAGCAAAAGTTGCTGAACTTTATCCAGAGTTTAATGTGCCAAAGTAAGTAAGCCACAGATTTGCTAGAAATGAGTGATG GTACATCATTCTTGAATGGTTTGTTGAAGAAACTGTTCATTTTTTATTTGAACATCCGTTAACTTGGTTCATGTGTTGAG CTATGGTTTTCATTCATGCACTAGCTAATGAATCTTGAATGTCATCAATTATCATGGTGTTTCTTATTTAAGTTTCAAAC TATACTGTACAGTACATGCATGGCTTTTTACTGGAAAACTGTTATGCACTCACCCACCAATTCCAACCCACACCTAGAGA GAGAGGCATAGAAGAGAGGGAGCTGAGAGATATGATAGATGATATAATAGGAAAAGAAGAGGCAGAGAGGAAGAAACGTG GGTGTGAATGTATCAAAACTGTGTATTATTGCTGTGGCATTAGTTCATGTTGGTCACGTTTTCAATTCCTTGTCAAAAGC ATTCAAAAAGAAAAATAGATTAGGATTTGAAGCTGGGTATTTCTTGTAGACTTGTCAGTATACACTATACAGTCATCTTA ATCAAAATACAAGGTTGTTCTAATCCAAAAATTTCTCATATGGTGTATGTCATTTTCCTTTGAAGGATGCAACGAGATAC CCAGCCAGGATTGTTGAGAGCAAAGGATGGATCAAAGAAACTCATGGATTTGGGTTTGGAATTCATTCCAATGGAGGAAA TTATTAAGGATGCTGTAGAGAGTTTGAAGGACAAAGGGTTCATATCTTGA
CDS sequence (LotjaGi1g1v0115700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAAAGACATTGGCAGAGAAAGCTGCTTGGGATTTTGCTAAAGAGAATGGTTTGGATGTTGTGGTGGTGAATCCTGG TACTGTAATGGGCCCTGTTATTCCACCAAGGCTTAATGCAAGCATGGTCATGTTAGTGAGACTTCTTCAAGGTTGTGCTG AAACATATGAGAACTTCTTTATGGGATTGGTCCACTTTAAAGATGTAGCATTGGCACATATTTTAGTGTATGAGAACAAA GGAGCAGCTGGTAGACATATGTGTGTAGAAGCTATTTCTCACTACGGCGACTTTGTAGCAAAAGTTGCTGAACTTTATCC AGAGTTTAATGTGCCAAAGATGCAACGAGATACCCAGCCAGGATTGTTGAGAGCAAAGGATGGATCAAAGAAACTCATGG ATTTGGGTTTGGAATTCATTCCAATGGAGGAAATTATTAAGGATGCTGTAGAGAGTTTGAAGGACAAAGGGTTCATATCT TGA
Protein sequence (LotjaGi1g1v0115700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKTLAEKAAWDFAKENGLDVVVVNPGTVMGPVIPPRLNASMVMLVRLLQGCAETYENFFMGLVHFKDVALAHILVYENK GAAGRHMCVEAISHYGDFVAKVAELYPEFNVPKMQRDTQPGLLRAKDGSKKLMDLGLEFIPMEEIIKDAVESLKDKGFIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 160 | 160 | 2.1E-45 | – | |
| PANTHER | 1 | 157 | 157 | 4.9E-75 | – | |
| PANTHER | 1 | 157 | 157 | 4.9E-75 | – | |
| SUPERFAMILY | 2 | 154 | 153 | 2.74E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0115700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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