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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0161300 |
| Transcript ID | LotjaGi1g1v0161300.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT1G21890.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890; TrEMBL-Plants: tr|A0A072VQX4|A0A072VQX4_MEDTR WAT1-related protein; Found in the gene: LotjaGi1g1v0161300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:30085425..30091514) extracted from Lotus japonicus Gifu genome v1.2.
AAAGCACACCCAACTTCACTACTACTTCTCAAAAACAAAGAGATCTATCTAGAGAGAGAGGTAATAAATTTAAGATGGGT GTGACAACGTGTTGTGACAAGGTGCATTCATGGTTCCGCGATTCAAAAGCGCTTTTGATAATCATAAGCCTGCAATTTGG CTCTGCTGGGATGTATGTTATCACCAAGGATGCTCTTAACAAAGGAATGAGTCATTATGTGTTTGTTGTTTACCGTAATA TCATCGCCACTATAGTTCTTGGTCCCTTCGCATTTTTTCTTGAAAGGTTATAATTTCCCTTCTTCTCTTATTCATACTTA ACATCGAGCATGCATGCGTGCATGTTCCACACACATTTTTACTACTTGATGAATATAATATGCATAAGACCTAGCTTTTC ATTGTGTGATCAATAGTTGGAAGAGAGGGTGTTTCTATTTTTTACTTCCAGAAAAAACGGTTGGATTGATATTGACTACG TATGTCACATGATTTTGTAATCGTATTTGTTAAAATTGTGCGTTTCTTTTTAATTATATGAATATTATAAGATTTTACTG AAATAAACTCAACTTCAACATCATAAAATCATATGAATTTTGGGTTGTCTAAATGACCCATGATAAAGTTTGGGTTAAAT AACTCATCATCCAATCACGTTGGAGATAAATGAGTTGGAAATAAATTAATAAATAAAATATAGAAATTTCAACTCACTTA TCTCCAATGTGATTGGATGATGGGTTATTTAACCCAAACTTTATCATAGGTCATTTAGACAACCTCGAAAATTTTGAAAT AGCACTTCTAATGTCTATACATTTCAGTATATAGATATTATCCATTACTTTTACTATTATTTCACCATGCACCAACCATT TTTTTAGGTTACTTAGTGACTCGTGTAACTAACTATAAGTCTATTTTACCTTTTTCAGGAAAACAAGGCCCAAGATGACA ATTCGGATATTTTCAGAAATTATGGCTGTGGCTTTTGTCGAGTAATATATCATCTTTAACTTGTCATATATTGTGTAAAT AGATAGAGTTTTGATTTTAGTCTACCTAATTTTTAAATTTATATACGTCTCCTTTCTATTTTTGTATTCCTTTTAAACTC ATATCACCAATTAATTTTCAATCATATTGTTGGTCATTTATTTTTTAGCATACATATTAACTATGCTATGTCAATTATAT ACAGGATAATACTTGATCAGTGCTTCACCTTCCTTGGGATGAAGATGACATCAGCCTCTTTTGCATCAGCCGTGATGAAT TCCGTACCATCCATCACCTTTGTACTCGCAATCATTTTTCGGTAAGAAATTTAATCAAATTAAATTATTAATTAAGTTTT ATCTACCTGAATCAAGAAAATCATATTTAATTTTAAAGTTAAAAACAGAGTTTCTCCATAAATTAATTTAAAAACATAAC AAATATATTATAATTAACATGTACTGAACATGAATTACAAATATATGGTTTATAAGCGAACATGTTATTAACATGATCCA TCATATAATTGGTGTACTCGTTTTTATCACTTGCTTTATTTGCTGACACATGTAGAATGCTTGAACAGAGAAATAAGCAC GTAGCATGTGAATCCTACATAGATTCCACCACCAAGTTTAGGGGGGTAGTTCCTAATGACTCTTGGACATATTTAATTTT GGGCGGATTCTACCATACCCCCAATGTATGGTACACGACTGACGAGTTATGACGTGTACCAATGGGGGAGCGACACCTGG TACCGTATTTAAATATTTGTTTCAATTTTTAACATTTTCCAAAAATATAAGAAAAAGACATATTTATTATTCATTATTAT TATATCCAAGTTGAGTTAAGGTTAGTGAACCCATGTGGGTCCCTCTATGGTTAACACATTTCGAGGCTTTGAATTTCTGA GAGGGAAATTGAAGTGGGTTGTCACCTTTGGAGGGAGCAGAACAAAGAGTGCACGGCGGTGAAGGCGATTATGGCAGTGA AGGCGACAACGGCGGCGAAGGCTCCACTGTAAGCAGCGAAGGCTTGTTGGTTAGCTCCTGAAGCTATTTGAAGTGTTTGT TTGTGAGTTTCTTTCGGAATTCGACATTTAGGGTTCTAAGCTCTTGTTTTGTGTTACTGTAAGTCCTTCTCCTCTTTATT TAGTTTTTGTGTGTGTTTCTTTCGATTTATGGGTTTTTCAAGTTTAGGCCTTTCTCAAATGGTGAATTTAGGTTGTGTTT GTTGTGTTGATTTAGTATAGCTTCGATTTTTTGGATCTGAAAATGTACCATTCTGAAGTTGGTTAGGTAATGGAAAGTAA TGTACAATCCGGTGAAAATGGAGAGGAAGAAGCCCATGTCAGTTTAGGTAACAATGGGCATGAATTATCTGAGGAAAATG GTGGTTCTACTTGAGTGGAGGATGAGGACGATGATGGTGCTGTGTATGAGAAGAGCATATTAGATTTGACAGAAGATGAT ATAATGGGTATGGAATTTGATTCTGAAGAGGATGCGATTAAGTTCTACGAAAGATATGGTCAGTGTTATGGTTTTGGTGT AAGGAAAGACAATGTCTATCGTTCTGCTAAGGGTTACATTGTTACTCGTCAACTGGTATGCAGCAAAGAGGGGGTGAGGC ATAGAAAATACGTGCAGCGGAGGGACCGGGTTAGAGTTTCAAAGGGAATTACCAGGGTGTCATGTCCAGCTCGCTTCCGT GTTCGCTTTGAAAGCAACTCAGGTAAGTGGAAAGTTGCTTACTTTGTCAAGAATCACAACCATGTTCTGGCACCTGTGGA TAAAGTCCACTTGATTTCTTCCTTTCGGCACCTCAATGATTCTGACAAGGCTCAGATTAATAGCCTTAAGCTACATGGGG TGAGGACTTGCAACATAATGGGCTTGATGCTGGGGCAGAAAGGTAGTCATGAGGCATTGGGTTTTACGAAGAAGGATCTG TTCAATCACATTGATAAGGAGAAGCGGATAAGGGTAGGAAACGGAGATGCAGTTGCTGCTTTGTCATATTTTCAGGCTAA GGCTGAGGGTGATCCAATGTTTTTCTCCAAGTATACTAAAACTGAAGATGAAAATCTCAAAGACTTATTTTGGAGTGATG GAGTGAGCAGAGTGGATTACCATGCTTTTGGCGATGTAATTGCCTTTGACAGCACCTATAAGAGGAACAAGTATAATAAG CCTCTTGTGATTTTCTGTGGCTACAATCATCATGGGCAGACAACAGTTTTTGCTTGTGGTTTGGTTACGGATGAGTCGAT CGAGACTTATAAGTGGGTTTTGGAGACATTTGCTGAGTGTATGTTTCAGAAGCACCCGAAAGGTGTTGTTACAGATGGTG ATTTAGCAATGAAAGAAGCAATAAGTTGTGTCTTTCCTAATGCCCGTCACAGGTTGTGTGGTTGGCATATTCAACAAAAA GCGCTACAGAAACTTAAGAATTCAGACTTTTTGGATGATTTTAAAGTTCTGATTTATGGCAACTTCAATCCGGATAGATT TGACCATGTTTGGGCTAAGGTTATGGAGAAGTATGGATTTGGTGATGATGAGTGGTTGACAAGAATGTATGGGATGAAAG AAATGTGGGCAACTGCATTTATGAGGGACAAATTCTTTGCAGGCATAAGAACCACGTCAATGTGTGAAGGGATCAATTCA TTCATCAAGAGCTATGTTCAATGTAAAAACAGTTTGATTGATTTCATTCATAATTTTGAGAGGGCTGTGAAGGAGTACCG ACACAATGAGTTAGTTGCTGATTTTAACACAATGTATTCAGAACCTTTGCCCACTACTTCCCTTGGTTATATTGAGCGGG GTTTCTCCCATAAATTGACAAGGAGCATGTTCAATGAAGTTAAAACTCAGATTCAATATGTGGGTGGCTTAAATATTATC CAAAGGACTGAGGTCAATGATGTGGTGATGGTGAAGATGAACAAGGCTTTGTATGAAAGGCGTGAGTATGTGGTGTTATA TGACAAGAATTCTTCAAAGTTTGTGTGTGATTGTGGTCACTTTGAGTATTATGGAATTCCTTGTTCTCACATGATATGTG CAATGAGAAATGAGAGACTGGCTGAAGTTCCTGATAGTCTTATTTGTAAACGGTGGTCAAGGACGGCTAAGGTGGACTAC ATGACTCAGATTAATGACACTGTTACTGGCAATGATTCAAAGAAATTGGCGATGTTAAGGAGGGGTGTGCTTTCTGCTGC TTGCAACATACTAAGTGAAATAGCTTGTGAGAATGTGAATGATTTCTCTCAAGTCTTGCAGGACATATATAAGTTGGCTG ACAGTGTTCAAAGGCGTAGGGTGGGAAACAAAACCATCCGCACTGGACCATTCTTGATTGGTGATCCCGCTGTGGTGATC ACAAAGGGGCGCAAGAAGAAAGGTGGGAAAAAGACAAGGTTGTGCTCAAGATGCAGAATGCCTGGTCATACAATTCGCAC ATGCCCGGAAATGCGTGAAGGTCAAGGAGTTGGTTCCCACGACACTGCTATGAGTGATTCATCTGTGGAGCTTGATGATG TTAGTATACATTTGGAGTTCTTAAACTATAATATTTTATTCTACTTGTTTCAGTTTAGTAGTGATTTAAAATTAATTTGT GTGTGTAGGTTGATGAGGTATTGCCATATAATGTAACTATGCCTGGAGTCTCCTCACTTGAAGTTGCTGGAAAAGGCAAA GGCAAGGTATTATCCTTGTGGGCCATCTTTGTTTCATTCATTTTTGATCAGTACATGTCCATGAGCATTTTAGATTTAAC TTTGTTTTACAGGATCAGAGTGTTAACGAAGCTTGTTCTCAAGATTTGAATTATCCTTTTATGACTCCTTTGACCCAGGA GTATTTTCATCCTGGAATGAACATCATGGATGGGTTCACTTTGCCATCATACCCTGGGATTCGCATATGTGAACCTGGAT CTTCTACACAAGTCCCAACTGTAAGTGTGAATGTGTTCTTGAAAGGGATTAAATTTTGTCTGCCAAGATTATGTTTTCAG ATTTTGTAACCAATGTTGGCAAAATCTATAGCAAAATCGCAAAATCCTAAGATTTTACGATTTTGCAGCACTGTTCCGAT TCAAATTGCATGCAAAATCTTTTTTTGGTGGAATCCCGTAGAATCTTAGATTTTAATCGTAAAATCGTAAAATCCTATTG AATCTTACGATTCTAGTATTTTTTTAATTTTTGAAGCTGATTCCTAAAATTGGGGAAACTAGAGAGTTTTTTTACTTTGT GGAAAAAACAACCCACCACCCAGCATTTAGGGGATTTCAAAATTGAAGCTCTAATTGATTGTAGTTGCCAAATTTGAATG GTTCATTGACAAGAATTAATAACTGATTGTATATTTTGAAAAATCAACTCATGTGACCGTTTTCATGCCTCTAATTGCCT ATTTAATTCACTCATAGTAGAGTGAATTGAATCACGCATTCATGCTCTGTTTTCTGTAGTCTCTATCTAGGTCTCTTCTT CTTATGTTTTCTCTTCATTCTTCAACATCTTTGTTTTCCTTCATTCTTAGTACTCTTATGATTTTGGATTGAGATTATGA CTTATATGGATGTTAATCTAATGAATTTTTATTCCAATTTTTGTTAAATGATGTGACTTACAAGATATCAATGCTATTTT TTTGTTTTTCTATTCATGGTACAATCTTACGATTCAATTTACGATTATACGATTATCCGATTTTGAACCCCCTCTCCGAT TCTACGTAGAATCTAGTTTTTCACAACATTGTTTGTAACTAAACTATTGTTGTGACACAGTTTGTGGGTTGCTTAAATGA AGTTGAGCGGAAGGCCAAGGCTGCACGCATTTATGTTAGCGATAGCAGTGGAGAAGATTGATGTCGTTGGGGATGATGAT GCGGAGGAGTAGATGGTGAAGACACTTTGATTGACTGTAGTTTAGGTTGTGGTAGTTTTTGGATTGATTAATGGAAATGT TGATACCTAATAGCATACACTTTAATTAATTTGCACTGTGTTCTGTTGGTGCCAGCCACATGTGTTGTTATTCAATGCAT TTAACTTAGG
CDS sequence (LotjaGi1g1v0161300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGTGACAACGTGTTGTGACAAGGTGCATTCATGGTTCCGCGATTCAAAAGCGCTTTTGATAATCATAAGCCTGCA ATTTGGCTCTGCTGGGATGTATGTTATCACCAAGGATGCTCTTAACAAAGGAATGAGTCATTATGTGTTTGTTGTTTACC GTAATATCATCGCCACTATAGTTCTTGGTCCCTTCGCATTTTTTCTTGAAAGGAAAACAAGGCCCAAGATGACAATTCGG ATATTTTCAGAAATTATGGCTGTGGCTTTTGTCGAGATAATACTTGATCAGTGCTTCACCTTCCTTGGGATGAAGATGAC ATCAGCCTCTTTTGCATCAGCCGTGATGAATTCCGTACCATCCATCACCTTTGTACTCGCAATCATTTTTCGGTAA
Protein sequence (LotjaGi1g1v0161300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVTTCCDKVHSWFRDSKALLIIISLQFGSAGMYVITKDALNKGMSHYVFVVYRNIIATIVLGPFAFFLERKTRPKMTIR IFSEIMAVAFVEIILDQCFTFLGMKMTSASFASAVMNSVPSITFVLAIIFR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | - | – | |
| PANTHER | 15 | 131 | 117 | 2.9E-58 | – | |
| PANTHER | 15 | 131 | 117 | 2.9E-58 | ||
| Phobius | 19 | 36 | 18 | - | – | |
| Pfam | 20 | 130 | 111 | 1.7E-11 | ||
| TMHMM | 20 | 37 | 18 | - | – | |
| Phobius | 37 | 47 | 11 | - | – | |
| TMHMM | 47 | 69 | 23 | - | – | |
| Phobius | 48 | 69 | 22 | - | – | |
| SUPERFAMILY | 53 | 130 | 78 | 8.24E-7 | – | |
| Phobius | 70 | 80 | 11 | - | – | |
| TMHMM | 81 | 103 | 23 | - | – | |
| Phobius | 81 | 103 | 23 | - | – | |
| Phobius | 104 | 108 | 5 | - | – | |
| TMHMM | 108 | 130 | 23 | - | – | |
| Phobius | 109 | 130 | 22 | - | – | |
| Phobius | 131 | 131 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0161300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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