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LotjaGi1g1v0190800.4

Overview

Field Value
Gene ID LotjaGi1g1v0190800
Transcript ID LotjaGi1g1v0190800.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Nicotinamide-nucleotide adenylyltransferase; TAIR: AT5G55810.1 nicotinate/nicotinamide mononucleotide adenyltransferase; Swiss-Prot: sp|F4K687|NMNAT_ARATH Nicotinamide/nicotinic acid mononucleotide adenylyltransferase; TrEMBL-Plants: tr|G7KEH1|G7KEH1_MEDTR Nicotinamide-nucleotide adenylyltransferase; Found in the gene: LotjaGi1g1v0190800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:37606868..37609889) extracted from Lotus japonicus Gifu genome v1.2.

ATGGATGTTCCCTTGCCATTGGATAAATTAGCTTTAGAACTGATTAGTAATGAAACCTCCCCTGGAAACACTAGCAAGTA AGTGTCTCCTTATTATTTAGTTTAGATAATTGTGTGAAGGAGTTTTCTATTGACCTTATTATGAATTATGACATTATCTC TGTCCATAAATAACAGCAGCAAGATATATGCAATTCTGGTTGCAACTGGAAGCTTTAATCCGCCTACTTTCGTGCATTTA CGCATGTTTGGTGAGTTGCATTAGCAATTAGATTGCAGTGTTTGCTGGATGGAGAAATCCCGAATTTTAAAAGTGCAGTA ACTGTTAACATTTGGCATCACATGTTAACCACTGATAGAACATGCTCAATTTATGCTTCAATGTATTAAAAATTAATGCT TATACTAATCAAATACATACAATAAGAATAACATTTTAGATTACTATAAGCTTACAAGAGTTGTTATGAAGTGTTTGACA GTTTGTTTTACATTATAACCAACTCTTTATCTATGTTGTCTTCCTTTATGATTAAATTTGTTATGATCTCTGAGTTTCTG GTCTCTAAATGAAAGTAAAGGAGAGAGGGGAGAGATACCTATTTAAAAACTTCCTTCTAGTTCATTTCAAGTGTCACGTG ATGAAATTTCATTGACAAAAATTTTATGAGTTCAGAGTGCTTCAATTTTCAATTTCATTTATTTTCTTGTCTTGTAAAAA AAACTGAATTTATGGATGTTACTCCTAGAGCTTGCAAGAGATGTGTTGAATTCCAAAGGCTACTGTGTAATAGGAGGTTA CATGTCACCTGCGAATGATGCATACAAGAAAAAGGTATGTTGTTCACAAGCAGAGAGAGAAAGGGTATCTTAATTTTATT ATATAGTACATATATATGTGTATCTGTGAAAGTTGTAAGATGTTCAAATGACTGAATAAGGAAAAATATATGCTTGACAT TTGGGGTACACTGCAGTTATACGAAAGTCCATGAGAAACATGTTTGAGGTTTAATAATCTTTTTTTTAAGTTGTTATTCT TCTAGGAATTCAGACATGGAGATCAAGTACTATGCTGCTATTCATACAATCATGATTTTCTTTCTTTTCTTTTCTTTTTT CCCTATTTCAAGCAATACTATTAGTTTCACAGCTGCACATTGGGTTAATTTTCTGTAACTTGTATGTTCATACAGAACCT AATATCTGCTGAACATCGAATACGATTATGTCATCTAGCTTGCAAAAGTTCAGAATTTGTAATGGTTGATCCATGGGAGG TAAATCACTTTTTCTATATGCTAGATTGTACATCTTTTATTCTTTATGCTTATAGAAAAGTTTCATCATCGAAACATTTG AATTTGTAAGAGTGCTTTTATATCATGTATATTATTGCAAGAAATATATCAATCTGGCTGGCCTGATTTCTTCATACTTT TCATTTTTGTTTGGGTATAAACTCACAGGCAAATCAAAGCACATATCAGCGCACTTTAACTGTTCTCTCCAGAGTCCACA GTTCTATTTGTGAGACAGGGTTGGTATCTAGAGGTATGCTCAACAAACAAGTCTTCAAGGAAAGCACATTATTCTAACAA GTTACAAGATGCATTAGTGCCTTTCCTTTGATAAAATCTCATGCTAACCATTTTTTTTTCTTTGCTGATTACTCCCTCCG TTCCTAATTATAAGACCTAGTTTCAAAATTTTCATGTTCCTAAATATAAGACCTCCTACAAAAATCTAGCAAAAGGTTTT GTACTCTTCCATGTTCACCCCTCACATTAATTGTATGTTTTCAATTCCAAAGTTACCACCTACCATTAATTACTACTATT CCAACAAACTATGAATGCAATGATTATTAGTGAGAGAAAATGACAAAGGGTAAATAGGGAAGAATGTATGCATTTTTAAA AAACCAATACACTAATTAGTCACATTAAGTGATTTCTTAATAAGCGCAATTTTTTGGAATAGGTCTTATATTTAGGAACG GAGGGAGTATGATCTAAAAGCAATACGATAATTTTCTTTTGTATTGATTAGTGCAGAATCCCTCAAGGTCATGCTTGTTT GTGGTTCTGATCTCCTCTATTCTTTTGGCATTCCTGGATTCTGGATTCCTGACCAGGTACTTATGCATTGTAGAAAAATC TAATATTACTTAATTTTAGATCGAAGGATGTCATGTCTCTAGCTTAAACTCTACGAGAACATGCATAGTGCAATGTCCTC GTTAATTTGATCCACGTAATATTTTTGGTAAATTATCCTTAAAAGGTAGGGGAAATCAAAGTCAAAGGAGTTGGATTGGT TTTGTGATGTTTTTACTGTTAGAATTGGTATGCTGGTAATGGAAACAATGGACTAAAATTAATTTTCATTTTTTGCTTTA GGTTAAGACTATATGCAGAGATTATGGAGTAGTCTGCATTCGCAGAGAAGGACAAGATGTGGAGAAGACTATATCTGATG ATGAAATTTTGAATGCGAATCAGGTATATCACATTCCAAACTTTTTTATTTGTTGCCTTTCTTTATTTGTATTTGACCAC ATTAAGTTCAAACTATAGGTGTATAAAATCTTTAAATTGATCAATTCCTCTAAACCATGATTAGTTATGTAACAGGATTC ACAGTACTATATATTGTCTTGATAGCATTTTTCCATGTTTTTTTGCTGGACAAGAATAAGCTGTTGAATGAATTGCTTTG CTAATTAGCTTTCTTTTTTGTATTTTAATTCACCACTACAATTTTTTTAGGCTAATATTGAAGTTGTGGATGAGCTTGTA CCAAATCAAATCAGCTCAACGAGAGTAAGGTAATAATATGACCTTGTTTAAGTGTAAAAACATGATGATTTAACAGAAGG GACAGATTGTTCAATTTTACTGTTTTTTTTACTATTCAGGGATTGCATTGCAAGAGGATTATCAATAAAATATCTTACTG TGGATGAAGTGATTGATTATATCAGAGAGCAGCAATTGTACTTGAACTCAGATGATAAATAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0190800.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATGTTCCCTTGCCATTGGATAAATTAGCTTTAGAACTGATTAGTAATGAAACCTCCCCTGGAAACACTAGCAACAG CAAGATATATGCAATTCTGGTTGCAACTGGAAGCTTTAATCCGCCTACTTTCGTGCATTTACGCATGTTTGAGCTTGCAA GAGATGTGTTGAATTCCAAAGGCTACTGTGTAATAGGAGGTTACATGTCACCTGCGAATGATGCATACAAGAAAAAGAAC CTAATATCTGCTGAACATCGAATACGATTATGTCATCTAGCTTGCAAAAGTTCAGAATTTGTAATGGTTGATCCATGGGA GGCAAATCAAAGCACATATCAGCGCACTTTAACTGTTCTCTCCAGAGTCCACAGTTCTATTTGTGAGACAGGGTTGGTAT CTAGAGAATCCCTCAAGGTCATGCTTGTTTGTGGTTCTGATCTCCTCTATTCTTTTGGCATTCCTGGATTCTGGATTCCT GACCAGGTTAAGACTATATGCAGAGATTATGGAGTAGTCTGCATTCGCAGAGAAGGACAAGATGTGGAGAAGACTATATC TGATGATGAAATTTTGAATGCGAATCAGGCTAATATTGAAGTTGTGGATGAGCTTGTACCAAATCAAATCAGCTCAACGA GAGTAAGGGATTGCATTGCAAGAGGATTATCAATAAAATATCTTACTGTGGATGAAGTGATTGATTATATCAGAGAGCAG CAATTGTACTTGAACTCAGATGATAAATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0190800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDVPLPLDKLALELISNETSPGNTSNSKIYAILVATGSFNPPTFVHLRMFELARDVLNSKGYCVIGGYMSPANDAYKKKN LISAEHRIRLCHLACKSSEFVMVDPWEANQSTYQRTLTVLSRVHSSICETGLVSRESLKVMLVCGSDLLYSFGIPGFWIP DQVKTICRDYGVVCIRREGQDVEKTISDDEILNANQANIEVVDELVPNQISSTRVRDCIARGLSIKYLTVDEVIDYIREQ QLYLNSDDK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12039:SF0
24 247 224 5.8E-96 –
PANTHER
PTHR12039
24 247 224 5.8E-96 –
Gene3D
G3DSA:3.40.50.620
26 243 218 4.3E-70
IPR014729
SUPERFAMILY
SSF52374
32 246 215 4.69E-50 –
CDD
cd09286
32 243 212 2.32158E-107 –
Pfam
PF01467
34 216 183 4.8E-25
IPR004821
TIGRFAM
TIGR00482
35 243 209 4.6E-43
IPR005248

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0009435
Biological process NAD biosynthetic process The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.
Subterm of
GO:0016779
Molecular function Nucleotidyltransferase activity Catalysis of the transfer of a nucleotidyl group to a reactant.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0190800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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