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LotjaGi1g1v0214000.3

Overview

Field Value
Gene ID LotjaGi1g1v0214000
Transcript ID LotjaGi1g1v0214000.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description ATP synthase gamma chain; TAIR: AT2G33040.1 gamma subunit of Mt ATP synthase; Swiss-Prot: sp|P26360|ATPG3_IPOBA ATP synthase subunit gamma, mitochondrial; TrEMBL-Plants: tr|I3SLV8|I3SLV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0214000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:47184319..47188675

We have encountered an error when attempting to retrieve your sequence: Unable to fetch BLAST database metadata.

CDS sequence (LotjaGi1g1v0214000.3

We have encountered an error when attempting to retrieve your sequence: Unable to fetch BLAST database metadata.

Protein sequence (LotjaGi1g1v0214000.3

We have encountered an error when attempting to retrieve your sequence: Unable to fetch BLAST database metadata.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF039089
22 325 304 1.1E-108 –
Hamap
MF_00815
46 325 280 24.181
IPR000131
Gene3D
G3DSA:1.10.287.80
48 91 44 8.2E-10 –
PANTHER
PTHR11693
48 326 279 6.6E-127
IPR000131
PANTHER
PTHR11693:SF22
48 326 279 6.6E-127 –
TIGRFAM
TIGR01146
48 325 278 1.5E-85
IPR000131
CDD
cd12151
48 322 275 1.70466E-97
IPR000131
SUPERFAMILY
SSF52943
50 325 276 5.23E-71
IPR035968
Pfam
PF00231
51 325 275 1.5E-74
IPR000131
Gene3D
G3DSA:3.40.1380.10
98 230 133 2.9E-34 –
PRINTS
PR00126
106 125 20 1.4E-32
IPR000131
PRINTS
PR00126
198 215 18 1.4E-32
IPR000131
Gene3D
G3DSA:1.10.287.80
231 326 96 4.8E-28 –
PRINTS
PR00126
272 291 20 1.4E-32
IPR000131
PRINTS
PR00126
303 324 22 1.4E-32
IPR000131
ProSitePatterns
PS00153
311 324 14 -
IPR023632

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0015986
Biological process ATP synthesis coupled proton transport The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
Subterm of
GO:0045261
Cellular component Proton-transporting ATP synthase complex, catalytic core F(1) The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled.
Subterm of
Part of
GO:0046933
Molecular function Proton-transporting ATP synthase activity, rotational mechanism Enables the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
Subterm of

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Expression data