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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0214000 |
| Transcript ID | LotjaGi1g1v0214000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP synthase gamma chain; TAIR: AT2G33040.1 gamma subunit of Mt ATP synthase; Swiss-Prot: sp|P26360|ATPG3_IPOBA ATP synthase subunit gamma, mitochondrial; TrEMBL-Plants: tr|I3SLV8|I3SLV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0214000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:47184319..47188675) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGATGGCTGCTGCTCTTCGACGCGAGGGGAAGCGTTTGGCTCCTCTCATCTCTCCCCTACCAATCCGATCCTCTCC CATTTCTCCGTCAGTTCTCGATTTGATTTCGCTTCATCTCTTCCCTTTTTCTCAATCACTGATTGATTGATTGATTTCAT TTTGTTCACAGAGACCAAACCCTCAATGGATTCCGCTCCATTTCAACTCAAATTGGTACGATTCATTCAATTACCCTTCT TCTTCCCCCTTGATTGTATTTGTATCGCTTGATTCATGGATCTGTGTAATTTTGTTGCAGTTCGAAACCGGATGAAGAGT GTCAAGAATATCCAGAAAATCACCAAGGCCATGAAGATGGTTGCCGCGTCTAAGCTACGCGCTGTTCAAACCAGAGCTGA AAATTCACGTGGGTTGTGGCAGCCCTTCACGGCCCTTCTGGGTGATGCTACAAGTATGTATGATCTATTATTATGATTGG ATCTTATACACTCTTCTGTTGATCTTTGATATTTGTATGTCATGGTTTTGTTGATGTGTGCACAAAGTTTTTGATGTGTG CTTTTGTGAAGAGATATCACTTAAACTTTGTTTGCGTCGCAGAAGCACACATCAACAGTTTTTGTATGTATTTTTATGAA TTAGGATTCAATAGTGTGTGAATGAGAATGTATGCGATGTTTCTGTTGCCCTGCCTTTGCTCATTGGTGGTTCTGTTTCT ATGCTTAGGTGTTGACGTCAAGAAGAACGTCATTGTTACCGTTTCATCTGACAAAGGTCTTTGCGGTGGAATCAATTCCA CATCCGTGAAGATAAGCAGGGCTTTAAGCAAATTGAATGCGGGTAAATTTTTGCACTTCCTTTTTGCATGTATTGCCATG GTTGCAATTAGTGGCATAGTAACTTTTTGCAATTTCAAGGATGGTTATGTAACTGCAACCATGATACAATTTAGAACCCT TGCAATGTTAAATTACATTTTTGTTGGAATATTATCAATGAGACTAAATTTGTAATGTTGAACGATTCATAGGATAAAGT CTCTGAATGATAATAGTTTCATTCTTATTTGCTACTACAGGGCCTGATAAAGAGACAAAGTATGTCATATTGGGCGAGAA AGCTAAAGCTCAGCTGATTCGTGACTCCAAGCAAGACATTCTGCTCTCATTAACTGAGTTGCAGAAAAATCCTCTGAATT ACACTCAGGTTAGTATATTGTGTGCCATCCAATGGTTGATGGTCTTACTAAATACATTTGTGCCTGAACATTATGGTTTC TAGAGCCTACTTAAATTTTCTTGAAATGATCTGTTCATAAGTGATTACTGTTCAAAAGCCGATATTACAATTTGATAGTT TGATATTTCTATGGGCCGACACTACTTTAAAGGGTAAAGGACTTTAAGTAACTATGGAAATTTATGACTTATGAGGTCAA GATGAACTTCATAATTGAATATCATGTAGATGCAACAGTTTACCTTTTAGTGTGCCTTTGAATCTTGAGATCTCATGTTT AACATATTTCATGGAATCCAGTTCTTAGTGCTCTAAATTAATTTGTTGTTAGGAAGATTGAATTATGACCTTCGTTATAA ATGTTTTTATGGAGAAATTCTGATTGAACCCAGGCGGTGATTGATCAATGTAGGCAACCTAACCCTGTGGAGCAAGGCTT GTGTGTTGTTGAATATTGAAATTTAGCACATGTTTGGCTCAGGTTCTTATGAGGAAATAATCGTTTATTGTTTTTAGTAG CTCTCCCAAGATGCTGCCAAAAGAGGGGGTTTTGACCCATAATAAGTTATGTGGATTTTGATGATTGCCGATCCATATCT GACATAGATAAATTTTATATATGAATGTTTTAGATAGTCTAGTGCGGAATATGTTCCTGTCTTTCACTCTTTCCTTCTAA TTGTTGTATTTTCAGGTGTCAGTCTTGGCAGATGACATTCTAAAGAATGTTGAGTTCGATGCATTGAGGATCGTGTTCAA CAAATTTCATTCAGTTGTACAGTTTTATCCAACTGTGTCAACTGTACTATCTCCTGAGGTACATACATTTATTAAGCAGT GGTTTGGATTGCCTATGGTGTACAAGTTTTGTCCACTGAGTCCTATCATAAAGTCTTGTTGAGATTCTAGGTTTTGGTGG TGCTTTATATGAAGAAAGGTCTGAGGACTTTTATTTTGCAATATTAGGTTTTCACTATATCCTTCTTGTTTTAATGATGC GAAGTGACGCAATTTCCTTGTAGATTGTCGAGAGAGAGACTGAATCTGGAGGAATGCTTGGGGAATTGGATTCATATGAG ATTGAAGGTGGTGATTCAAAATCAGAAATTCTTCAGAATCTGTCTGAGTTCCAGTTTTCTTGTGTGAGTACTTTTTTTCA AAACTTCATGACAGACTATTTTTTTGTAGGCTGCATTTTCACATCACACTTTGATTTGAATCATAAGCTTTAGGGTTTGT GATGGATATGTTGCACTTCTATATTCACTACCCAGCTATACTTCTCGCTCTGTTCTTTTGTTGTTTTTGTTCTAAACTGT AGTGGGTTCCTATCGACTTCATAACAAGTTCATTTTGGCGTTACAATAAGATGATTCTAGGATTTCATGTACGGCACAAA TTCTGCTCATAATTTTCTTTCTATGCATGTCCTTACATAGTACACAATATTATATAAATGAGAGAGGGAGACCTTTTCTC ACACAGCATAGAAATGTCTCCCTTTTGGTTTCGAAAATGTTATTTAGTTATAGCATATTCATAATTTGTCATGATCCTTC ATTTACGAGGGAGGAGAGGGCAAGGTGGAGAGGAGAGAAGTATAAATGCGTTTTATTTTTGTAGGGTTGAGGGGGAGGGG AGTAAGTTATTTTTCCATTGATTTTTCACCTCATGATATTCAGTGTTCATTTAAACTCAAATGCATCTAAACCCTAAAGT ATAAAGTGTTCGAAAATTTTATTCTAAATTACATCTTACAAATATTCTTCACATACCTAAGTGGGGCTTGAATGAGTAAA AAATAACCGTTAGTCACTTAATTGTTACTGTTTCGATTAGATAGGTGTATGTGCTTGAATTAGTTACCTGGTTAGATAAT TAGTTAATGAAGGTGATATAGAGGGTATGAACGATAGGAAGTAATAATGAAGGGGGTCCTTGGATTTGTAGTGGAGTTTG GGAACGAGAGCCTAGGTGTCTCATCTGTTCTTGTACTCTTCGATGCAGGTCAACAGACGTCGTATTCTGTCAATAAAATT TTCATTTCTTTCCCATATTCTGATCCAGTTGTCATATTCTTAAAACATCATGTTTTATGTTCTAGGCTTTAATTTCATGT TATAAGTTGCTATTTTCCCTATATTTGCTTAGCTGCATCAAGAATGCTAGATGATAACTTTACTGCTGGCAGCAATGTGA GGGTGTCACCGGTCACTGAAAATTCCTTGGAAATTCAGAATGTTAAGACTTGGTTATTGTCAGTCTGCGGCTTCTCATTT AAACTGTTGATCAATTCAAGGAGTTGACACTATTTTAAAATGCATTTCGGAATGTTGTTCAGCAGTTAAATTACTACACG TTTTCCTTTTCCTTTGGTATATTCTTACTTTTTGATTTATAAATTTTATGGAGAATTGCAATCAATTTAGTTGTGTGAGG CTTGTCTTGCATCAACCTGAAATTTTGTGCTGATTGTGGCTTATTATCGGTTTTACTTGTACATTTGCTTTCTATTTCTT TTGAATGCTTTTTAATTTAGAAATGTTTAGGCAAAACCTTTTACTGTTTGAAAGTTATGTCTGTTTCAAATTATGCTTCC ATTTTTCTTTACACGCTACTTTGGTATAGGTCATGTTCAATGCGGTGTTGGAGAATGCTTGCAGTGAGCAAGGAGCAAGG ATGTCTGCTATGGACAGCTCTAGCAGGAATGCTGGGGATATGCTTGATCGTCTGACCCTCACCTATAACAGGTCACTTTT TCTCTTGTTCTCTTATACCACATGCATGTGTTAGTGTTGTCAAATAGTGCCGCGTACCACTGGTCTCACTGCTATTTTTC CGCTATGAGGGTTTCAGATAGCGATTTTTGGCTATCTGTTATTTTCTGCGATCCACGATTAACAACACTGATGTGTTTAA CTTCCATTCAACAACCATGGTCTTGAACAGAACTCTGTTTGGACTATCCTATTTTAACGTATTATACTATTATTATCTCA TTAAAAGCTACTGTTTCACTGACTGGTCTCCTTGTTCATTGCGACAGAACTCGTCAAGCATCAATTACCACTGAATTGAT TGAGATTATCTCTGGAGCTTCAGCGCTGGAAGGTTAA
CDS sequence (LotjaGi1g1v0214000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGATGGCTGCTGCTCTTCGACGCGAGGGGAAGCGTTTGGCTCCTCTCATCTCTCCCCTACCAATCCGATCCTCTCC CATTTCTCCGTCAGTTCTCGATTTGATTTCAGACCAAACCCTCAATGGATTCCGCTCCATTTCAACTCAAATTGTTCGAA ACCGGATGAAGAGTGTCAAGAATATCCAGAAAATCACCAAGGCCATGAAGATGGTTGCCGCGTCTAAGCTACGCGCTGTT CAAACCAGAGCTGAAAATTCACGTGGGTTGTGGCAGCCCTTCACGGCCCTTCTGGGTGATGCTACAAGTGTTGACGTCAA GAAGAACGTCATTGTTACCGTTTCATCTGACAAAGGTCTTTGCGGTGGAATCAATTCCACATCCGTGAAGATAAGCAGGG CTTTAAGCAAATTGAATGCGGGGCCTGATAAAGAGACAAAGTATGTCATATTGGGCGAGAAAGCTAAAGCTCAGCTGATT CGTGACTCCAAGCAAGACATTCTGCTCTCATTAACTGAGTTGCAGAAAAATCCTCTGAATTACACTCAGGTGTCAGTCTT GGCAGATGACATTCTAAAGAATGTTGAGTTCGATGCATTGAGGATCGTGTTCAACAAATTTCATTCAGTTGTACAGTTTT ATCCAACTGTGTCAACTGTACTATCTCCTGAGATTGTCGAGAGAGAGACTGAATCTGGAGGAATGCTTGGGGAATTGGAT TCATATGAGATTGAAGGTGGTGATTCAAAATCAGAAATTCTTCAGAATCTGTCTGAGTTCCAGTTTTCTTGTGTCATGTT CAATGCGGTGTTGGAGAATGCTTGCAGTGAGCAAGGAGCAAGGATGTCTGCTATGGACAGCTCTAGCAGGAATGCTGGGG ATATGCTTGATCGTCTGACCCTCACCTATAACAGAACTCGTCAAGCATCAATTACCACTGAATTGATTGAGATTATCTCT GGAGCTTCAGCGCTGGAAGGTTAA
Protein sequence (LotjaGi1g1v0214000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMAAALRREGKRLAPLISPLPIRSSPISPSVLDLISDQTLNGFRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAV QTRAENSRGLWQPFTALLGDATSVDVKKNVIVTVSSDKGLCGGINSTSVKISRALSKLNAGPDKETKYVILGEKAKAQLI RDSKQDILLSLTELQKNPLNYTQVSVLADDILKNVEFDALRIVFNKFHSVVQFYPTVSTVLSPEIVERETESGGMLGELD SYEIEGGDSKSEILQNLSEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIIS GASALEG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 22 | 325 | 304 | 1.1E-108 | – | |
| Hamap | 46 | 325 | 280 | 24.181 | ||
| Gene3D | 48 | 91 | 44 | 8.2E-10 | – | |
| PANTHER | 48 | 326 | 279 | 6.6E-127 | ||
| PANTHER | 48 | 326 | 279 | 6.6E-127 | – | |
| TIGRFAM | 48 | 325 | 278 | 1.5E-85 | ||
| CDD | 48 | 322 | 275 | 1.70466E-97 | ||
| SUPERFAMILY | 50 | 325 | 276 | 5.23E-71 | ||
| Pfam | 51 | 325 | 275 | 1.5E-74 | ||
| Gene3D | 98 | 230 | 133 | 2.9E-34 | – | |
| PRINTS | 106 | 125 | 20 | 1.4E-32 | ||
| PRINTS | 198 | 215 | 18 | 1.4E-32 | ||
| Gene3D | 231 | 326 | 96 | 4.8E-28 | – | |
| PRINTS | 272 | 291 | 20 | 1.4E-32 | ||
| PRINTS | 303 | 324 | 22 | 1.4E-32 | ||
| ProSitePatterns | 311 | 324 | 14 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | ATP synthesis coupled proton transport | The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis. | ||
| Cellular component | Proton-transporting ATP synthase complex, catalytic core F(1) | The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled. | ||
| Molecular function | Proton-transporting ATP synthase activity, rotational mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism. |
Expression pattern of LotjaGi1g1v0214000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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