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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0258500 |
| Transcript ID | LotjaGi1g1v0258500.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT4G08290.2 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290; TrEMBL-Plants: tr|G7J320|G7J320_MEDTR WAT1-related protein; Found in the gene: LotjaGi1g1v0258500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:62609268..62615276) extracted from Lotus japonicus Gifu genome v1.2.
GTTCTCATAACAAACCACAGCATTAATATTTTCTCTCTTCACCACTCTTCTCTCTCTTTGACCAGTCACACTCACCATGA GTTCCAAAAATGTGTTTTGCAGATTAGGCGAGCAACTCAGTGATGCAAAACCATACTTGTTAATGATTGGGTTGCAATTT GGCATGGCTGGAAATTACATCTTCGGCAAGGATATTCTTAACCATGGGATGAGTCGTTTTGTGTTCATTGTTTATCGCAA TGCCATGGCTACCGTTGCCATAGCTCCTTTTGCATTTTTTCTCGAAAGGTGTCAATCATATCACTAGTATATTAGTTACA TGTTACTTAATATCTTCCTTTATAAGCACTATATATTTCTTTCATTAAGTCGGTGACTAGCTCTACTTTTGTCAAATTTT TTATTCACTATATATTTTTCAGGAAAAGTAGGCCCAAGATGACACTATCAGTCTTCCTCCAGATAATGGTTCTGGGATTT CTAGAGTAATGATCTAAAACCTTATTACCTATGTAACACATGACAAGAGCGTATCTCCAAGCATATATTCATATAAAGGA ATAATAAGGATTTTAGTTCTTTTTTTGAAAATAAGGATTTTAGTTCATGAAGTCACAACATTAATCCTAAATTCATACAT TAATCAGGCCTTCTGAGCCGTTTGATCACCGTTTGTTCCTGATCGAACGACTTAATTATATGTTCCATCAAAATGAGACA GCTTAGATAAACTCAATTTGAGTCATATATACCATCTTAATTAAATCGCTCAAATATCTTTAGTTCGTTATATAGTGCAT GGTTAATTAATTTTGAGCAGGCCAGTTTTTAATCAAAGCTTCACTTACTTGGGGATGAAGTACACCTCCGCATCATTCGC ATCTGCTATCACCAATGCCGTGCCCTCTATCACCTTTCTGCTCGCAGTCTTCGTCCGGTAAATAAATAATTATCATCGCT GTTCATTTTCTTCTAATTTTTATATAGTTGGTGCGCACACTTTGATTTAATTTGCATATATGTTTATAATATAAGTTTTA CATGTGTAAAGTAAGCTGAATAATTTATTGAATGAGTGTAATAAAACAATTTTATTTAGGCTGGAACGTCTCAAATTGAA GGAGATTCGGAGTCAAGCCAAAGTGATTGGAACATTAGTAACCTTTGGAGGAGCTTTATTAATGGCAGTGTACAAAGGTC CTGGGTTCAACCTTTTTCATTCTGAAAACACAACCCACGAACAAGATGGAAGCATCTCCTCTCACAGCCACCAAACTACA GGGGCTCTTTATATACTAATGGGTTGTGTGGCCTTGTCTTCCTTCTACATTTTGCAGGTAAACGAAAATGACTTTGTAAA TTAATTTTAGCATATATAATGAGGATATTGTTAATAACATGTAATAAATATTAAATGATGCAGTCAATAACGGTGAAAAG ATATCCAGCAGAGCTATCACTGGCGACGTTGATTTGCTTGGCGGGAACAGCGGAAGGCACTGCGGTGGCACTTGTGGCTG AGCGTCACCCCCACGCTTGGGCAATTGGTTGGGACTATAGGATCTATGCTCCACTTTACACGGTTTGCCAACAAACTCAT TTAAATTTAATGTTGAGAAACAACCCCTCTCAACATGGTACAGTTATTACGCCAACAAAATTGGCAGAACCCTGACACTA CAGCTTAAAAAACACCAAAAAACATCTAAAAACCCCACATCCAATGCCAAACCAAACACAACTATGAGAGGTCTCTATGG AAGTAAAGAAATGGTAGGTTTAGCCGAATGGGATCTTACCAATCGCACGACACCTGCAAGATAAAGAACCAACCCAAGCG TGCAATACACAAAACCCTACCATAACACCCAACAACCGTCATAGAGCTGAGATCTAAAGCCTAAAGAACTTGAAACAAAA AAAGTAAAGAAAAAGTTATTAGTTTACTGTATTTTGTTTTCTCCTTTTGCATAATTCTTTTTAGTAAATTTCAACCTGCA AGATAGAGAACCAACCCAAGCGTGCAATACACAAAACCCTACCATAACACCCAACAACCGTCATAGAGCTGAGATCCAAA GCCTAAAGAACTTGAAACAAAAAAAGTAAAGAAAATATATTAGATCAAAATAAGTTTTGCGAGAATATATTAGATCAAAA TAAGTTTCAATCCAATTAGCATTAACCATTCAAACTCGTGTTGTGCGAGAATATATTAGATCAAAATAAGTTTTGTTGTT GGGTGAAGAAAATAGGGTTTGAAGGTGACGTTGGTTATGATGGTTATTGTGGCCTATTTTTTAAATTAATTAAAAGAAAA ACGAAAAATGGAATATGAGACTTTTTTTAAAGAGTTTTACCAAATAACTTTTAACTTAAAAGTAGCTTTTAAGTTATAAA AAAAATAAAAATGGACAAACGGCTTCTACTTTTTTTAAAAGCTCTTATTTTTAACTTTGACTTAAAAGTAGCTTTTAATT CCAAAATAAGTTGGGCCATACAAAGTCTAAAGTCTACTGTATTTTGTTTTCTCCTTTTACAGAATTCTTTTTAGTAAATT TCAAGTCAATTGAAATTTAATATGACTATAAGTTATTTTTTAACTTACATATAAGTCATTTTTAATATTTAGAAATTGAT AAATGAATTTTTTAAATTTACTCTCATATTTAATATAAAAGAGAAAGTGAAATTTTTAAAAGTTGTGAATTTTGAGAGAT AAATTCATAAGAAATTAAGCATATGATTCAATTAGAGAAAAACATATTTCTGAATTTGTATTTTTTTAAATAGAGTAATT TAGGAAAGTTAATAAAACTTCTTACAAATTAATTATTACTCCTCTCCCTTTGTTTATTTTTATAAGACCCCTTAGAAATA CTTTTGTGTCCTTTAATATAAGACCACATACTAGATTTTATGAATATTTATTATCTTCTTTCATATATACCCTTGTATTT ACTTAGCTTTTCTATTGCCAAAGTTTGACTAACACTTATAATTAAGGGTAAATATGGAAGATTTGATAAATATTTTAAAA ACCAATATATAATGTACTTCTACAACTACAACCTATGTATATAAGGCAGTGAGTGAGGATATGTTAATTAGCATGTTTGT CTGTTCTTTAGTACTCATGTGATTGCCATGTAAACTGAATTTTGTAAAGGAGGTTAGGAATATACATTCCTTCAACATGA TCAAAGACAAGAGGGAGCGAAGAGAAGAGAAAGAATATTTGAGTCAGTAATCTATCATCATTATCTAATAAAAGAAGTAA TATTCTATCATTATGAAAAAGATGCATAAATGGAAGTACACGCAAATGCCTACAAAATCACTAAATGATCCGGGTTTCGT AACGGATACCTGCATTCATATCCATTACTTTTTGCAAGTCATCACACATCTCTCTGTCACCCGGAGTCCTCTCTCTCCAA CTCCCAGTTTTCGTCAGACAGCCCTCTCCTTGATCTGTGCTCTGCATTTTTTTGTATGATATGTTTGTGGAAAACTGATA GTATTGGTATGTTGAATCTGATATGTGGTTTTTAATATGGGAATGAGCAATTTGTATGATTTCTTAACTACATTAGTTTT GGCACTAGAAAACTGGTGTGAATGTGATATGACAAATTTCAACAAAATTTGTTCAAAGAGCTTGAAATTTGATGTCCATT TGTGCCTTATTACTTCATATTATCAACATTTGTTTCCTCATTTTCTGTTATTATAGGTTCACTTGCAGGAGTTGTATTTC ATGCAAATGGATATTATCAGCATTCAGCAACTTCAATGGTTGAAGACTATAAGATCTTATTTTTTAAATGTTTAGCTAAA TATGATGCATTTAGTTACTTTAGATAATCTACAAAATTATCTAACATGCTCTTTTGGCCAATTTTATTACTTTAATCTTA CACTTCAAAACTTTTAAATCGTAATAAAGAATGCTTGCACTGTAATATATGGTGCTCAGAAAGTTCGTTTCCCTCTTAAT CTGCAAGAACTTATCCTAACGGATTTATTGTTAACATTATCTCCTTTCAGGAGGGAACAAGATAAATTTTCTAATACTTG TTTAAACTTCAAAGATCTTGCCTTGGTTTGTTAATTTCACTCTTCATATGTATGCAGGGGCATGTTGGGGAAGCTATTAC TTATGGATCTGGTTTTTTTTTAAGGTAAGCTTGTCGCTTTCTGTTCTCCATTTTATTTACGAAATATTTGGTGCATCATT GTACCTGACTTCCTTTTAAAGATGAATTAGACACAAAAACTTAATTAGTACATTGGATGCTATTGATATGCAGTGGGAAA GATGCATTGCTCTTGAGTCAACGAATCACCAAAGAGAACATGTAAAAGATGTATATAAGTTATATTGTGGTATAGACTAT AGAGGAAAAGTAATGTCAAAAAGGTTAGAGAAGTGGAGAGGTATGAACAATCACATGATCAAACTAGATTAAGCAAGCCC CAGCCAGAAATGGAATGAAACAAAGGCACATTTACATAGTTAGGAATTGGTCTAGCTTACTGCTATAATCTTTTTGATAA ATAGAAGCTCAGATATCTCAGATATATTGGTTCATAGCTTGTTTGTTAATTGTTATTACCAACAAAGCTCAACACAGCTT ATAGATAACCAAGTCCGGTAAGCATTACATGGGTTTGATCCTTGGACCTATGAATGGAGAAGACATTGTTGGAAGAGGCA AAATCTGCTTCGGTAATTTTTACGTCTCAAAAGAGATTGTCTCAAAAGAAATTAGTCTCCGAACGTGCATTCAGAGAATG TATCTGCTTGTGTCAAGCACACACCTGCTAGCCCGAGAACTAGAACTATTACCTCTGTTTCATAATATCAGTCATTGAAG TTTTTCTGCAAGGATTAAGAAAATCATTAAATATCTTTAATTTCAGGAACATATGATTTCATTTGAGTAAATTAGGCTTT ATTCCCCTTGTGCTTTTTCATTCACTTTACTCATTCCTTATATTGGTTATCTAAGGTGAAAATATAAATTTAAACAATTT CAGATCTGAGCTGATATTTTGGAAAGGAGGGAGTATCTACCTGTTTCCTTTTTAATAGATGTTGCTGCACTTTGAATCAA GGGATGAAAGTAATACATTTTGTTAGTGTGTTTGGTTTTGAGTTTGGGTATTTTGAACCAAGTAGAAGCAAACATGCAAA TACAAATTGGCCTTAATTAAACAAGCTCTTTCTAGAAAATATTACTGTGCCTCAGGTGTGGATATTCCAGAGTCATTAAA AACATTCAATTTGAAGAGAGGTCAGGCTGCTCATAAACGAGGGAAGAAGAAAGTCTTAAAACTGATCCAGTAGAGAAAAA TTCCAGATAGCTGCAAAAGAAGGATGTGAACTTGGATTCAAATGGCTTGCAAGGTCAGAGGAGGAAGAGAAGCGGTTACT CACAGAAATGTATGGAGATAATGGATACATTTATTAGTAGGGTGTAGTAATGGATCTTTGTATCCCTTCACTTAATCACC TACCATGAATCTTATGTGTTTCAAAAAAAGTAAGAATCTTGTGTTGTATGTATTAATGGATGGATACACTTATTTTAAAT CATTCTAAGTCTTATATGACCGCGTTCTTCGATGGAGCAGCAACGCTGGGTTAGGTGGTCCCCTTCCCTCAAGGACTGCA TTGTGGTTATTGGTTAATGTTGATGGTAGCGTCCATGGGACGCCGCGTCGAGGTGACATTGGAGGGTGTCTTCGTAGCAT GGTTGGAGAATGAATTGCTAGCTTTTATGGTTTCTTGGATGATTGGACATCCTGCTCTTGGAGTTACTGGCTATCTAATA TCCTTCACTACAACAAAACTGGGTGTTAGCGGCGGTTGTAAGTAGGACCGACGGCTGTTAAAACCGCCGGTAACACAAAA TATGTGTTCTATTGTTTCTGGACCTAGCAGCGGTTGAAACCGCCGCCAAAACTCCAGAAAATTAATGTTTTTTTTTTCTT CTGTTTTTG
CDS sequence (LotjaGi1g1v0258500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCCAAAAATGTGTTTTGCAGATTAGGCGAGCAACTCAGTGATGCAAAACCATACTTGTTAATGATTGGGTTGCA ATTTGGCATGGCTGGAAATTACATCTTCGGCAAGGATATTCTTAACCATGGGATGAGTCGTTTTGTGTTCATTGTTTATC GCAATGCCATGGCTACCGTTGCCATAGCTCCTTTTGCATTTTTTCTCGAAAGGAAAAGTAGGCCCAAGATGACACTATCA GTCTTCCTCCAGATAATGGTTCTGGGATTTCTAGAGCCAGTTTTTAATCAAAGCTTCACTTACTTGGGGATGAAGTACAC CTCCGCATCATTCGCATCTGCTATCACCAATGCCGTGCCCTCTATCACCTTTCTGCTCGCAGTCTTCGTCCGGCTGGAAC GTCTCAAATTGAAGGAGATTCGGAGTCAAGCCAAAGTGATTGGAACATTAGTAACCTTTGGAGGAGCTTTATTAATGGCA GTGTACAAAGGTCCTGGGTTCAACCTTTTTCATTCTGAAAACACAACCCACGAACAAGATGGAAGCATCTCCTCTCACAG CCACCAAACTACAGGGGCTCTTTATATACTAATGGGTTGTGTGGCCTTGTCTTCCTTCTACATTTTGCAGTCAATAACGG TGAAAAGATATCCAGCAGAGCTATCACTGGCGACGTTGATTTGCTTGGCGGGAACAGCGGAAGGCACTGCGGTGGCACTT GTGGCTGAGCGTCACCCCCACGCTTGGGCAATTGGTTGGGACTATAGGATCTATGCTCCACTTTACACGGTTCACTTGCA GGAGTTGTATTTCATGCAAATGGATATTATCAGCATTCAGCAACTTCAATGGGGCATGTTGGGGAAGCTATTACTTATGG ATCTGGTTTTTTTTTAA
Protein sequence (LotjaGi1g1v0258500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSKNVFCRLGEQLSDAKPYLLMIGLQFGMAGNYIFGKDILNHGMSRFVFIVYRNAMATVAIAPFAFFLERKSRPKMTLS VFLQIMVLGFLEPVFNQSFTYLGMKYTSASFASAITNAVPSITFLLAVFVRLERLKLKEIRSQAKVIGTLVTFGGALLMA VYKGPGFNLFHSENTTHEQDGSISSHSHQTTGALYILMGCVALSSFYILQSITVKRYPAELSLATLICLAGTAEGTAVAL VAERHPHAWAIGWDYRIYAPLYTVHLQELYFMQMDIISIQQLQWGMLGKLLLMDLVFF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 11 | 264 | 254 | 2.4E-164 | ||
| PANTHER | 11 | 264 | 254 | 2.4E-164 | – | |
| Pfam | 18 | 160 | 143 | 2.5E-15 | ||
| Phobius | 20 | 36 | 17 | - | – | |
| TMHMM | 20 | 37 | 18 | - | – | |
| Phobius | 37 | 47 | 11 | - | – | |
| TMHMM | 47 | 69 | 23 | - | – | |
| Phobius | 48 | 69 | 22 | - | – | |
| SUPERFAMILY | 53 | 163 | 111 | 1.7E-10 | – | |
| Phobius | 70 | 80 | 11 | - | – | |
| TMHMM | 78 | 95 | 18 | - | – | |
| Phobius | 81 | 99 | 19 | - | – | |
| Phobius | 100 | 110 | 11 | - | – | |
| TMHMM | 110 | 132 | 23 | - | – | |
| Phobius | 111 | 132 | 22 | - | – | |
| Phobius | 133 | 143 | 11 | - | – | |
| TMHMM | 144 | 162 | 19 | - | – | |
| Phobius | 144 | 162 | 19 | - | – | |
| Phobius | 163 | 191 | 29 | - | – | |
| TMHMM | 190 | 209 | 20 | - | – | |
| Phobius | 192 | 209 | 18 | - | – | |
| Phobius | 210 | 220 | 11 | - | – | |
| Phobius | 221 | 242 | 22 | - | – | |
| Phobius | 243 | 298 | 56 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0258500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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