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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0304900 |
| Transcript ID | LotjaGi1g1v0304900.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | import inner membrane translocase subunit; TAIR: AT2G40800.1 import inner membrane translocase subunit; Swiss-Prot: sp|Q12490|YB11B_YEAST Transposon Ty1-BL Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0A0KSP6|A0A0A0KSP6_CUCSA Uncharacterized protein; Found in the gene: LotjaGi1g1v0304900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:74372493..74381366) extracted from Lotus japonicus Gifu genome v1.2.
AGTGTTTTGTACCGGGAGAATGTCAGAGAACTCATCTGCGACTGCGTGCGTAGTTCCGGCGACCCTTGCTCCTTGAACCT TCATTTCTTCTTCTATGGAAGGGTAATCGGGTCACACATACTCATAGAAACTAACAAACCAGATCATTTATCGGGTTGAC CCGACCCTATTCATTACCCTCTCTCCTTCGCCGGCGTTGTGAGTTGTTCGGAATCCAAAATGCTCCGAGCAAGAGGTTCC TCAAACAGAATCACTCAATTCCATCAATGTCTCTTCCGCACCATCACCAACCACCGCTTCACCACCTCCTCCACCCAGCT CCGCCACTCTCCTTCTTCATTCGCAGCTAAATCAAATGTCACTACCCTCTCCTCCCTGCTCCGATCGCCACCGCCGGTAT CCTCCCCCGCCCGGCTGGGAGCCGTTAGATTCTTCGCCATAAAGCCCCCCAACTTCGACGGCGGTTTTGCGAAGAAGGTG CTGGACAAACAGACGGCGGCGGTGGCCTCCACGTTCTCGCGCTACCGCGAGGCGATCGGGTTGCAATTTGACGCTTTCCT CCGGAGGAATTATCCCATTCTATTGGGTGTTGGTGCAGTTGTCGTCTGTGCTGTGCTCTGGAGGATTCTCTTCGGGATCA CCAACATCTTCGTCTCGCTTTCTGAAGGCTTGGCTAAGTATGGCTTCCTTGCCCTTTCATCTGCTATCGTTGCTTTTACT GTAAGTTCTTTCCTTAATTTATTTTATTTGTGTCTTTATAGTTCTAGCTGTTGAAATTTTGGATCATATTGGTTGTTTTA TACATGAGGATCACTCACATTAACATTAGGAAAGTTGGAATCTCATGGGGCTGCTGCTTGTGTTTGTTGTATAAGAGCAA GTTTGGATATAATTCACAACTAGTAATCATAAGAAGAAATACCCAAGGGTTATCTCAGGTGGTAAGAGTTAGGGATATAA GGGTTGGGGCGAATGAAGGGTGAAGGGGCCAGGGTTCAAACCTGAACCCTGGTGAAGGAACTAATTTACTAACATTACTA ATTGCTAACTACTAACATTTGCTTATAAAAAAAACACTCATAAGAAGAAAAAAGAGAGTTAAAATGATATGAGTCTTCTT AATAATGCTTTTCTCAATTGAGAAGTTTTCATGAGTTAGAAGCTAATTTAAATTGGGCCTGAGTAAGTTATATGTTTAGG GATATTTGAAAAATGAATAGAAGCTCTTTCGTTGACTTTAATAGGAGTCATTGTGCATTGGTTTGTCACTAGTTCTAATT ATAACATCTTGCTTAATAGTGTTTTTTAGAGCAGAATTAAAAAAATGTGCATTTTCCGTTCTCATTATATATGGACCACT GCTGGTGGAACTTGTTGTTAGTGAATGATGAATTAATGTATGGAACTATGGATCATTGTCTAATTTTACTCATTTGTCTC TTTAAGGGCTTGTATATCCGCTCAAGGTACAAGATCAACCCTGAGAAAGTTTATAGAATGGCCATGAGAAGACTTAACAC GTCTGCTGGGATTCTCGAAGTTATGGGTGCTCCCCTTACAGGATCTGATATAAGAGTTATTGTGATGTCGGGCGGTGGGT TTCAGTTAAAGAAGTTCAAGCCAACTATTAGGAGTCGGCGATGTTTTCTCATGTTCCCCATAAGAGGTTCTGAGAAAAAG GGCATGGTCAGTGTTGAAGTCAAGAAAAAGAAGGGCCAGGTAAATCAAGTTCCATTTGATTATATCAGTAAACACTTCAT AGAATTTGTTAGCCTTACATTGTCATTTGTTGTATCTCTTATTCTGTCTCAACATTTTCTTTTCTGGTAGAAATTCTACT AATATTGTTAACTTGGGTACATTTTGTTGTTCAGTTTCTTGAGATTTGTTAATTGGTCCCAAGATTGTTTTTCATGGAAA AGTTAATTTCTTTTGATTGGTAGTTCCACCTTCACCAGTTCTTAATTCTTAAAGGAACCACTTCAGAATGTGTTCACTGT TCAGTCTACAAATGGTAGTGACAATCTTCCCAGCCCAAAATCTATATATGGAACCAAGTATGAACATGCCAAATATCTAG CTTTGAGCATTTACACAGAAGGTGCAATTTTTATAATAGGGGGGATTTACATTAATTTTTTATTGTAAATCTTTAGATTG GGTCATGTTCTAAACTTCTAATACGGTAAAGAAGGGGTTTTGTATATATGTTTGCATAGGAAGACACATTTGGGTGTTTT CTTTTGCCAAACTTGGCTTGATGTAGATTATGATGCAGCATATGATTGTATTACATGCTTTAGTGAACCCTGAATTGGCT TCATGGTTAAGGCAACCTGCAATCTGTGCCAGTTTTTGCACATTTGATTGGAGAATAATGCTTATATTTGTGGGATTTCC TTGCCATTGCACTTGATATGGGCTTGCTTTGGCGTTTTGCTTCTAGTTGATGTAAAGCAAATGAACTTTGTCATGAATTA ACTGTCATAAAAATCTAAGCAGGTAGGTGAAAAATCATAGAATGAATTTTATGTTCAACACGCCCCCTCAAGCAAGAGTC ATTTGGACTTGAAGCATGCAAAACACACAAGCCTACTCTACAATGTGGTGAAGATCACATTTTTCTTGACGATTAAGGGG GAAAGCTGGATCAAACTCTTGACCATTTGATCATTGAGGCTTTAATATTATGTCATGATCATGAATCAACAGAACCATTA GACATAAAATCTCTCATGTGCTTTCAGCCAACGACTAAAGCTTTAGGGATGATAATTCTGGGAAGTCCACTAAATCTTGA TTCTGGGAGGGAGTGAGATCTTTGTGGAAGAAAAATATCCTCAAGTCGTTCAAATTTACGAGTTGACTCATGATTTTAAC TACCATTGCGAAACCCCTTTAAAATCTCTCCTGTGCTTCCACGTGAAATAGGTGGCATCATGCAGTCCCACTGCGTCCAA CAATCCAAAAACCATGTATGGCTGTATGGTTAAGACTAGTGTCTTCATTTATTTTTATGGGATTTGTTTTCACTAGATAT GTTCCCTGTCTATATATATAGAACAAAGCAGTGGGATTATTGATGGCTGGAAACTTGCTTTAGTAACATAAGGTCAGAAG GAGTCTTCTGTGCAAAGATGCTATGGTATTGATTCTCTAATTGTTTAATTTGGAATTTAGGATGAATTCATAAAGTAAGT AATGTGTTTATGGATTTATTATTGAAGAGAAAATAATGCTATGCATATGCTTTAAGCCTGAATCTTGCATTACTTATAGA AAGATTAAGAGGAGAAAGGGGCAATCAGGTGTAATTAAAACTTCCAGAGCTTAGAAGTAATGTAGTGAAATGAGTTAGAC ATCTCTACACATATCATGATGTAGACCATTTTTTGGTGAAAATGTGATGTTATTGCTCTTTCTCTGGTAGGTATATATAT CAGGATATATATATATATATATATATATATATATATATATATATATAACAAGTAAAGAGCAAAGGCTTTTGAGTGGTGAA TGAGTCAATTGCAATTAGATTTCTATTCTGAATTTACTTTTAAAATAGGCTTCAAAAGTAATGAAATGTTGTGTTATTTG AATGGATTCACATTGACTGTTTTTGAATCTCTCTCTCAATTCTACCAATTACTAATGCCAGCATTCCTGGTGATCTTCGT TTGACATATTTATGGCATTCTCACTGTATGGAATTAAATTAAATTCCAGTATTTTGTTGAATCTACTGGAGTGGATTCAA ACAGCGGGTTTGATTATAATCTTAAATTGGTTGGTGAAAGTGCAATCTGATTCATTGAAGCTAAAATACATGCTCAAGAT ACTCCCGAGGATCTTTTATGTGCAAATAACATGGGCTTAAGATATCTTACTAAAACTTTGTATTTCTGAATTCTGAAATA GGATATTTTACTCAGACTGAAATATTAACTCGCATTGAAGAGCTTGATTATCTTCTAATTGCAATGGTCTTTTAATGGCT GTATTCACAGTTTAGAGTGGACTTTGTCCCACATATTATACGAATTGGGTCAATCATACAAACTAATGGGAAAATAGAGG GAGATGCCCACCATATGATTCTAGTACGGCAGATGAAATAGAGAAATGCTTCTGGTGTAACTAGAGATTCAAGAGTACCA CTCATGTTTAAAGGAAAGGGTGATAGAACTCAAGGCTAGGGGTCAGTTAGTTAGTTATACTTAGTGAGTTAGTTAGAATG TTATTGAGGCATGTAGCCTATAAATAATAGACATTAGAGAGTTAGAAGCATCTGGTTATTCATTTGGGATTTGGGTTTAG AGAGAGAAGTGGTTCTCTCTTAGGATTGGAAGGGTGTTTGGTATCCCTTTCTCTTGTATCTCTCCCTAGTTTCCAATTGG GAATTAGGGTTTTCCTATCAATAAAATCAGGTTTCTATCATTGGTATCAGAGCACCGATCTGGTGCCTGAAACCACTATA TCCCTGCGCTGTGTTTGGAGAAGAGAAAAATGGCGAGAAATTTTGATGAGTTGGTGCAGGAGCGCAAGAAATTGGGGGCG AGAATGGAGTCACTTGAAGCCAGGGCCGCGATGAACGAATTAGGACTTGCGGCGTTTGAGAAGAAATTCGAGGTGCGACT TGTTGTAAATCCTGTTCTAGAGAAAGAAATCTCAAGATTGGAGAACAAATTGCGAGAACTTGAAGAGAGGAGAAAACAGA GGGAACAAGAAAGGAGAGAAGCAGAGGCGTCACAGAGAGAATTTGAGGCGGCGTCAGAGAAAACGGAGGCAGCAATTGAG GCTGAGCAAGCAGTGGTAGAGGCGAGGCTGAGAGGATCGGAGTCCGCGGCGGAAGAAATACAAGAAACCGCGGAGGTTGT GCAAAATTACGAAGTTGCGACGGAGACAGAACTAGCAGCGGCGGCGATTCAGAGGCCATGGCAGAAAACGAAACTTGGTG CGGCGGATGAAGGACGGGCAGCAGCGGAGGCATGGCGAATGGAGTCGGAGGGAACTGCCCAGCCGCCACCAGCATCTTTT AGCAGGACAGAGATGGAAGTTCACCCTCCGTTTCAAGATCGACTCGCTGAATCACCACCAGTGTTATTGAATCTCACGAC GCCGGAGAAGGAGGAGGAAGTTGGAATGGGGAAGTCGTCCTCGTTCCGTCAATGGTAGAAATCCAGGATCAGAACCTTCG ATGGGTAACGAAGAAGGGATTCACCGTTTGGCCCCAAACCATCGATTTAGGGTTCGACAAAATTGTTCCAAAATTGGGGG AGAGGAGAAGCCAAAACCTGCGGCTCCAAACTACTGGATTCCGACGATTCACCACGCTGCCGGAGAAGGCTATCCGTCCG CCGGCGAAGCCACCGAACCCATCATGTAGTGCGTTGGAAATGGCAAAGCTGGAGGAGGCAGAGAGGTGTCCCTTTCGAAG TTGTAGGAGGGCGGCGCGGCCATTTCCACAACCGGCGAAGCTGCCGGACTTGAGCGGTGGTGGCGGTCTGATTTTCACGC TGTGGGATGTGATTAGTTGTGCGGCGATGAGCAATCACGTGCGTAGAGAATGGAGGGTAGAGGATAAACTTGGGTTAATC TTCTGGGGTCCACTGTTTGACAATAAGGGCCCAGCCCAAGACACTATCCAACTCTCAAAGGGAAGAAATGGGGACATGCA ACAGCATAGTGGGGGAGACAAATGGATATGTTGGGCCAATTTATCAGCTTTTGGGTTAAAACCCAATTTACCCATTTACA AGGGACAACAGGAAGCCAGATCGAAGTATCAAAGAATTTTGCAACAGCCGTGGGAGAACGATTTAGGTATTTTACAAGCT TTTGCTAAAACTGGGAAGTTGTTTACTGTTGTGGGCAATGGAGAAGGTAGTATTGCTTGGTCAAAATTATACTTCACCAT CAATTGTGAAATGTATGCATATAATATTTTTGGTAGGTGGGAACAAGGCCATTGTAGTATGCAAAAATGGGAGGTTGAAG CTTTTATTGCTAGTTTAGGCCATTTACAACATGGTACAGGAAAGAAGCATGACAGTATTTTTGGGTTATTAATTGATCGG GGGGGACTTTTGCTTTCACCAATTCCTCAAGAGGTTGTTGCAGAAATTGAGTATCAAAGTGGTTTGGGGATTAATGGTTT GGAGGGGTTTGCTTTTGAGGATTTTTCTTGCTTGCTACTTCAATGGGTGATGGACCATTCTCAAGGAGTTGAGTTTAATT CTCTGTTTTGGTGTCAGCATGTTTATGTTTGTGCCAGTTGGACTCTATACCACCTTGGGTCACTTGGAGGAGGGTTGATT TCTAGTGCTGATTCAGATATTGGATTACTTGAGACTTTGTTGGCTAGCTTTGAAGAGTTATCTCTCAATTCCAGTATTGG TCTCTTTGAGCATTTGTGGGCTGGATATGGGGAGATGCTTACAAACTCATTCTCCGCAGAGTTTGCTTTTGAAGTTGATG TTCCTTGGCTGTTTCTAGTTGGCAACTGCTGGAGTTTCTGCCTTGTGAGCATAGCTGTATTTTGGGTGGTTCATTGTTTT AGCTTGTATTTGTCACTTTTGTATAGTAGGCATACTTGCTCACTGTTTTAGTTGCTTTTTGTTCCTCACCTTGAGGACAA GGTGAATTTTCAGGGGGGGGGGGGGAGTATTGATAGAACTCAAGGTTAGGGGTCAGTTAGTTAGTTATACTTAGTGAGTT AGTTAGAATGTTATTGAGGCATACATTAGAGAGTTAGAAGCATCTGGTTATTCATTTGGGATTTAGGTTTAGAGAGAGAA GTGGTTCTCTCTTAGGATTGGAAGGGTGTTTGGTATCCCTTTCTCTTGTATCTCTCCCTAGTTTCCAATTGGGAATTAGG GTTTTCCTATCAATAAAATCAGGTTTCTATCATACAAGATCTGGAATTATACAAGACCGAGTATTAGGTGACACAGAACT ACCACAAAAGGAACTTAGTTTTGCTGTGATGAAAATATTATGATATATGGGTATTGCACAATGTAAGATAGGATTAGAAA TGAAAGAATTAGAAAGAAAAAAATGTTGGGGCTAGCCCAAACTCCTATTATGGAAACTATAGGAGTCTTCCGTTAGTTGG TCTGAGTATATATGAAGAAGATTTGTTGAAGCACTACTGAAGAGGGAAAGCTATGTGGCATTTTTTAATGTTTGGGACTT TGTAGCTCCCCTTGAACTGGCTTCTGACTTTATCACCTCACATAATTGCTTATTTTGTTTGGGCTATCCCTTACTGTGAT ACTTGCAAGATATTAGCAGATAAGGTTTTAATGAGGCTTGTTTTGATAAGTCTATTTTCAAGGAGGTATTAGGTGGGGTA GTTTCGTCATATTTAGGTTCTTTGTTTTTGTACATGTTAGTTCTTAGCTTGTCTCTTCCCTCTTCTTCTTTCTCTTTGTA TCGGGTTGAAGTACCCGTTGTACTTCTATTCAATATAATTCTTATTGCCTATCAAAAAAAAAATTTGTCTGTTTTCTATT TACAAAACTATACTTTGTTTTCCTATAATTATGTTGAAATTATTAGCAAGAACAATTCACAAAAGAAAAGGAAATACAAA GTGCAGAGATCAATTGATGCTTTATGGTTTTCTTAGCCTTTGCTGTTTTTTTTTCGATGCAGTATGATATGAAGCTGCTA GCTATTGATGTTCCCCTGGCTTCTGGCCCAGACCAGCGGTGGTATCTGGTTGGCGATGAAGAAGAGTACAGGATTGGTGG GGGCTTAATAGGTGAGCTAAGAGACCCTGCAGTGAAAGCAATGGCAGCAACCAAAGAATTTGATAATCTTGATGAGATTG AGGAAGAGGAGGATGCTGAAAGAGAACGTAAGGAGGCTGAAAGAAAGCACCGTGAAGAAATTGAGAAGCTTGAAAATAGC GGCACTCAGTAGCGGTCACTCATGATGAATCTCTTCCGATTTCTTCTTTTGTTGATTACAGGAGTTTGTTTTGTTCTTTA GAACACATTTATTTTGCATCATTTCGAGTTTTCCCAAGGTTTAGAGATTGTACCACAAGTGGTTAAGTTTATTGAACCAA AGTTAAGATAAATAAAGCTGACAGGGATCAACATACATCGGAATGGTCCAGCGTCTGTTGTTTCTAATGTTCTACTTTCG TCCAATTTCCAAAGGATTCTCAGTGTGCCTGGTTGGTGCCTCTTCACAAGTTATAGCGATGCTGAAATTATACAGTATAG CAGAAATAGCTAATAGGTTCTCTAACCACTTCGGTTGCAACATTAAAAATATATTCAATATGAGGGACATTGCTGATTGG CATTATACTGTGTGTATGGAACCCAATTGAGTGCAAAATGAACAGACTTTTATCCCAATCGATAAGGGGAGTTCTGTTCA GTTTTTGCCTTGAAGTGGGTGTTAATGTATGTTTGCACTGCTGCCTAGAGATATCCTAACATAGTCTAGTTGATTTAGCA GGTTTTAAATTTTACAGACTACAGAGCAAGGAATTCTCCTGCTTGGGGGCTTCTGAAAATCTTTCCTAGGTACCTTTTAC TCTGTACAGGACGAGGTAAATGGTTTTTTTTTTCTTTTTTCTGTGTCTGTCTTTTTATATTAATACATTTTAGGACATGT GGATATAAACAAATGAAAGTGCTGTAAGCACATGCACTGATGCATATACATTGAATGTCGCCTTAGGAATTGGAGAATCT AAGAAAGTGAAAAGAAAGGACTGCTGAACTTGAGTTCCTTATGATATTAATGGGCTGTTGTCTAAAAGCTATATGTGAAA GTGACTTCAAAGTTTATGTTCTTTAAGAGCCCCTTGAACTTTCTGTTAAGGTTTGTTTACCTTCCTCTTGAACT
CDS sequence (LotjaGi1g1v0304900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCCGAGCAAGAGGTTCCTCAAACAGAATCACTCAATTCCATCAATGTCTCTTCCGCACCATCACCAACCACCGCTT CACCACCTCCTCCACCCAGCTCCGCCACTCTCCTTCTTCATTCGCAGCTAAATCAAATGTCACTACCCTCTCCTCCCTGC TCCGATCGCCACCGCCGGTATCCTCCCCCGCCCGGCTGGGAGCCGTTAGATTCTTCGCCATAAAGCCCCCCAACTTCGAC GGCGGTTTTGCGAAGAAGGTGCTGGACAAACAGACGGCGGCGGTGGCCTCCACGTTCTCGCGCTACCGCGAGGCGATCGG GTTGCAATTTGACGCTTTCCTCCGGAGGAATTATCCCATTCTATTGGGTGTTGGTGCAGTTGTCGTCTGTGCTGTGCTCT GGAGGATTCTCTTCGGGATCACCAACATCTTCGTCTCGCTTTCTGAAGGCTTGGCTAAGTATGGCTTCCTTGCCCTTTCA TCTGCTATCGTTGCTTTTACTGGCTTGTATATCCGCTCAAGGTACAAGATCAACCCTGAGAAAGTTTATAGAATGGCCAT GAGAAGACTTAACACGTCTGCTGGGATTCTCGAAGTTATGGGTGCTCCCCTTACAGGATCTGATATAAGAGTTATTGTGA TGTCGGGCGGTGGGTTTCAGTTAAAGAAGTTCAAGCCAACTATTAGGAGTCGGCGATGTTTTCTCATGTTCCCCATAAGA GGTTCTGAGAAAAAGGGCATGGTCAGTGTTGAAGTCAAGAAAAAGAAGGGCCAGTATGATATGAAGCTGCTAGCTATTGA TGTTCCCCTGGCTTCTGGCCCAGACCAGCGGTGGTATCTGGTTGGCGATGAAGAAGAGTACAGGATTGGTGGGGGCTTAA TAGGTGAGCTAAGAGACCCTGCAGTGAAAGCAATGGCAGCAACCAAAGAATTTGATAATCTTGATGAGATTGAGGAAGAG GAGGATGCTGAAAGAGAACGTAAGGAGGCTGAAAGAAAGCACCGTGAAGAAATTGAGAAGCTTGAAAATAGCGGCACTCA GTAG
Protein sequence (LotjaGi1g1v0304900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLRARGSSNRITQFHQCLFRTITNHRFTTSSTQLRHSPSSFAAKSNVTTLSSLLRSPPPVSSPARLGAVRFFAIKPPNFD GGFAKKVLDKQTAAVASTFSRYREAIGLQFDAFLRRNYPILLGVGAVVVCAVLWRILFGITNIFVSLSEGLAKYGFLALS SAIVAFTGLYIRSRYKINPEKVYRMAMRRLNTSAGILEVMGAPLTGSDIRVIVMSGGGFQLKKFKPTIRSRRCFLMFPIR GSEKKGMVSVEVKKKKGQYDMKLLAIDVPLASGPDQRWYLVGDEEEYRIGGGLIGELRDPAVKAMAATKEFDNLDEIEEE EDAERERKEAERKHREEIEKLENSGTQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 119 | 119 | - | – | |
| PANTHER | 25 | 345 | 321 | 1.6E-152 | – | |
| TMHMM | 117 | 139 | 23 | - | – | |
| Phobius | 120 | 145 | 26 | - | – | |
| Phobius | 146 | 150 | 5 | - | – | |
| Phobius | 151 | 171 | 21 | - | – | |
| TMHMM | 154 | 171 | 18 | - | – | |
| Phobius | 172 | 347 | 176 | - | – | |
| TMHMM | 192 | 214 | 23 | - | – | |
| Coils | 311 | 347 | 37 | - | – | |
| MobiDBLite | 313 | 347 | 35 | - | – | |
| MobiDBLite | 325 | 347 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0304900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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