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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0319400 |
| Transcript ID | LotjaGi1g1v0319400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GDP-mannose transporter; TAIR: AT2G13650.1 golgi nucleotide sugar transporter 1; Swiss-Prot: sp|Q941R4|GONS1_ARATH GDP-mannose transporter GONST1; TrEMBL-Plants: tr|A0A151ST29|A0A151ST29_CAJCA GDP-mannose transporter; Found in the gene: LotjaGi1g1v0319400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:76873465..76878699) extracted from Lotus japonicus Gifu genome v1.2.
GGCATGTATGAGCTTATAAAAAAAAAACATGGCATGTATGAACTCAATTGAATAACAACAAAAAATGCTTATGACTTTTT GAGAGCTATCCTGTACCCAGCAACAGTGGATCTTTACCATACACAACAGTTCATGAAAATTGGGACAGAACAGAACAAAG CATAAAATATCTAGAAAAAGTTGGTAGCTTCTTCGAATGTAAAGAACTTTCCACTTTCAAATTCAGAACCCCTTTTGCTC CTTCCGCGCATCACCATTTCTGGGTTCATTCATTCCCTGAAAATTTCCAAAAAAAATTGTTTTTTTTGTCCCATTTTTGC CACCTCCAGTTTCATCCGAATCTCGGTAACAGAGCGATTATAGTCGAAACCCTTGGTGGGTTTTCTTCATCGATCACAAA CAAAGATGGGTTTGTGAGAAAGATTCTTCCTTTCCACGTTTCTCTCTAGTTGTCGATTCTGGGTTCCATAGCTTTGAACT CTGTGGAACTCTGTTGTAAGCTTCTTTTTCTTGTTCTCTGTGGATTGAACTGATTGCGTTTGAAGCTATACCCGGATCAC ATAAAAAATGAAGCCTTCTATAAATGAAGAACATGATGTGGAAGATGGCAAGTTGGTCAAAAGCAAAACAAATAAAATTC CCAATCAAGCCTTGTTGGCTGGACTTGCATATTGTCTTTCCTCTTGTAGCATGATTTTGGTTAACAAGTTTGTACTTTCC AGCTATGATTTTAATGCTGGGATATCCTTGATGGTGTACCAGGTAATTGATTGTGTGTTTTCTTCTTCACTCTTGTCTAG TTTGTAAAAGTTGCTCTTTGTGGATTCTGACACTTGGTATTATGGATGCAGAATTTCATTTCAGTGATTCTTGTTACTAT TTTGAGTCTTCTGGGTTTAGTTTCAACTGAGCCACTAACATGGAGATTGATTAAAGTTTGGTTTCCTGTGAATGTTATAT TTGTGGGAATGCTCATTACAAGCATGTTTAGGTATTCAGTCTTCAACTCTGGCTACTAAATGCTAGTTCTCTCTAAATGC TAATCTCTTCTTATGTGTGCATTTTTCTAATTTTTATCTGATGCTAGTATGAAACTGTGTTGATTTATTTTTAAATGAAA AAAATATGTTTTGAGAGATTCGGGTTATGAGTAATGTGGTGTAATCATGAAATGGAAACATTATGCTAATATAGAGGGAA ATTTTTTGCTTATGTAGAGAGCATCCAAGTTCTAAACTCTGGAAAATGTTAATTTTTTTATTGTCAAGCATGCGATGTTG ACATCTACTATCCATTCCAGTGTCAGTTTATGGAGTGAATTACAATAGAACAGCTTGTTACTCTTTTACTTGCGTGCATT ATATTTGCTTATCCATTTGTATTATGTGCAGTCTGAAATACATTAATGTAGCCATGGTGACAGTCCTGAAGAATGTTACT AATGTCATAACCGCCCTTGGTGAAATGTACTTGTTTAAGAAGCACCACGACAGCAGAGTCTGGGCTGCTCTATTTCTAAT GGTATGTTGAAGAGCATATAACACTTTTGATTCCTGGTTTTCATCTGCCTTAGAGCGTAATTTGGTGAAGAATAATGAGT TCATATTTTCACCTATTTTCAGCTGTGTTTTGCTGACACCTCCTACAGCCATTACTGTTGTGAATATATTGTTTTAATGT AATTGTTAATTGTGTATTCAGTATGCAAAAGATTTTATTTGTCTAATCATTACAAAAATGTTCATGCATTACTGATTAGT TGGTATTAGGTCCTTCTTTTGAAAGAACAAAATCTGGAGTGTGGTTGGTGAATTTAGGATGGTTACAAGGCTTACTTAAA ATTTCTGGAAGCCGAATTCAGTATACGGTTATTGCCGGACTGTGACAACTGATTTATGGGATACTTTTTGAAGTTATCCG TCCTTCTCCTTCTGCCACCTATTCATATGTTACTAGATGGCTTGTCTGATTTAATTCATATTTACTATAAACTTGTTTTT TTGTTGGACTCATGAAACTGTTTACTGTTATAATTGTCTTGGAACTGCATCAGGTGGATCCTTGCTTTACTGCACAACAC AGTTTTTAAATATGACAGCGTGAAAACGTTTATTTTCCCCTTGCAGATTATTTCGGCAATTACTGGAGGGATTACTGATC TCTCCTTTAATGCAACTGGCTATATTTGGCAGACACTAAACTGCTTCTTAACTGCATCATATTCTGTGAGTATTGATGTT TTATGATTTTCAGGTCAACCAATATAATAGAGATTTCATTCTTTTGTAATTCCACTGTCCTTACCTTTCTATTACTGCCT GGATGCTTTTTAAGTGAAATTTCAACAGAATGCTGCAAGATACGACTTTACAAAAAGTTTATGACATTTATATTCTGTTT GCGATGATGTTTTACATGTACACGTTGTAGTTGAAGCATAAATATTGATAGTTCGATATTAATCCAATATCAAATTGGAT TATTATCATTACTGTGTTTTGATGATCACTGTATTGTTCTTAATACTCTTTCAGCGTAATTTACTACCTCTGGTTGGTTC AACTATGATCTGAGCACATGCTATATATATATATATATATATATATATATATATATATTCTTCTTGTGTATGTTGTTTTT ATGGTTATAGTGGCTACCTAGACCCTAGGCTCTCTCTCTCTCTGTGTATAGTAAAAATGAAGGAAGGAAAATAATGGGAA TTTATATAGTTCATTGTGGGTGAAGTAAATTGATCCATTGCTTCAATCAAAGTTTTCTACTTATTCTTCACCTGTTCCTG GTCAGAACAGATTCAGTGCATTTCAGTTTGACATGTTACTCGTTTCGGAGGTGTTCTAGATTTATAATACTAGATTACTT TCACACTTTATTTCTTTATAACAATAATATATTATGTTTATATGTAGATAGCACCAGTTTTTAGCTTTTAGGTAATTTTG CTGATTAATTGGTTGTAATTGTTTTGTTGCTGCAGCTGACCCTACGAAGAGTCATGGATACAGCAAAGCAAGTTACTAAG TCCGGAAATTTAAATGAGTTTTCGATGGTCTTGTTGAACAACATCCTTTCTTTGCCTTTGGGAATTTTCCTGGTTGTTGT TTTCAATGAGGTGGATTATCTCTTCACAACGTGAGTTTTCTCCCACATTTTGTCAGTGAAGCCAATGTTTAGTGTTTTGC ACGACTTCTGAACAGGCTATGCAATCCCATCGGTTTAAATATATCTTCACTAGAGCATCCTAAGTTGACCGTTTACTTTC TGTTTGTTTTTCTTCATACTGATACACAGATCCAGACTCTCCAGAAATGTGTTTTTATGTCATAAATTTTGGTTATATTG ATGAATGAAGTAAAAAGCTATCCACTATGTTTTCAATTGACAGGCCACTTTTGAGATTGCCTAGCTTTTGGTTGGTGATG ACCTTCAGTGGATTTTTGGGACTAGCAATCAGCTTCACATCCATGTGGTTTCTTCATCAAACAGGGGCTACAACTTACAG GTGTGATCAGAAGTACCCATTGTTTCCCCCTAGAGAGAGAGAGAGAGAGAGAGAGAGAATAATCCATATTCGCATATGAT TTCAGATACCTAAGTGCAGTAAATTCAACTATAGTTATAATTTCCTATCTGAATATTTTGATATTGGGCTTCTACAGAAT GAACAATATCACTAATAATGTTGGATGAGGGTCTAAAGTAGTTTTACATGTGTGTATGTTTGGCTAAGAGATTACCATCT TTATAGGTACCAAGTCCTATGGCTTAGTGTAGGTAAAGTCTTATTTGAAGCAAAAAAAATCTTGTGTACCTGGTTTTTTG TGATATTCAAAGTCTTTAGTGCCATTCTATATCAGACCATGATGTTATCTTAATACTTTTAGACATCTAACCCTAGGTTT ATCATCTGCAGTCTCGTAGGTTCGCTGAACAAGATACCACTTTCGGTTGCTGGCATCCTTCTGTTTAAAGTTCCTACTAG TTTGCAGAATTCTGCTAGCATATTGTTTGGTCAGTTCTTTACCAGCATGTTTTGTTTTGCTTCTATACATTCCAGAATCG CTTATTTCCCCCACAAAAGCTACTTGGAGAAGCTTCTTCTAGAATCACTTCTTTATGCAATTTGAAAATCTATTAAGTTT CCAAACATACATTACATTAGCTGAACTGAAAATTGTCTTCTTACAACAACTACTGCTACTATTATTATTATTATCATTGT AGAATGCATTATTAGCACAAGCTTGTATTGAATTTTGTTTTCCCATGCAATTTGTAGGTCTTCTGGCAGGGGTGTTTTTC GCTAGAGCGAAAATCCGGGAGAGATCTCAATCTTGAAGAGTAGTGAATGCCAAATGTTGTGAAGCTTTGACACGAGAAGG AAGGAACCCTTCCCATCTATGGTATTTGATTTGCAGCTGAAGGTTGAAATCCAAGTCTGTGTGGTGTCATCTTAAGAGAT GGTATCAACTAAAGTAACTCTCCAACCTTTAAAATATGAAATTTGGTGGAGCTAATACTATTACTTGGGGTTGGTTCATG ATTACTTCAGTCAAAAGGGTCAGTTTTTTGCCCCATATTCATTTGGAGCTTCACAGGGACAAACTGCTTGGATTACATTG GAAGAAAAATTTGCCACGGACATTTTTCTGTTGGATTCTGTATCATATGATATTATGATTTCATTGTCCCCCATGTATCA CACTAGGATTTGTTTGACATGAAAATTCTCATGGAAATAGAAAAAAGTTGATCTTGCATAGTTGCATTCTGGGACACTGT CATACTCTGGCATTTTTCTCTTTTTTCCCCCATGATAATATCCATTGGATACCTATTATGTAGCCATTATGTGCACTAGA GTTATGTCTATGAATCATTGAATCAATTAAAAGAGAAATTGCTAGTGCTGAATATTATGCAAGGAAGGAAAATGTCAAAA ATAAATACAATACAATACAAAACATTAAAAACAGGAACATTTAACTAACTAAAATACAATGCTATAACCAACGGGTGAAT GGTTCAAGTGGTACATGCTTGATTCCCCTTAAGCAAGGTCTCGTGTTCGAGTCTTGTGGATGGAAAAAACCTCGTTGGAA GAGTTAGAATCATCATGATGTAGATGTTCTCGACTCGAACATGATTGCTTCCGAAGGAGGACACCTGTCTTACACCAAAC AAAAAATACAATAATATGAGTTAATTGAATAGAAC
CDS sequence (LotjaGi1g1v0319400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCCTTCTATAAATGAAGAACATGATGTGGAAGATGGCAAGTTGGTCAAAAGCAAAACAAATAAAATTCCCAATCA AGCCTTGTTGGCTGGACTTGCATATTGTCTTTCCTCTTGTAGCATGATTTTGGTTAACAAGTTTGTACTTTCCAGCTATG ATTTTAATGCTGGGATATCCTTGATGGTGTACCAGAATTTCATTTCAGTGATTCTTGTTACTATTTTGAGTCTTCTGGGT TTAGTTTCAACTGAGCCACTAACATGGAGATTGATTAAAGTTTGGTTTCCTGTGAATGTTATATTTGTGGGAATGCTCAT TACAAGCATGTTTAGTCTGAAATACATTAATGTAGCCATGGTGACAGTCCTGAAGAATGTTACTAATGTCATAACCGCCC TTGGTGAAATGTACTTGTTTAAGAAGCACCACGACAGCAGAGTCTGGGCTGCTCTATTTCTAATGATTATTTCGGCAATT ACTGGAGGGATTACTGATCTCTCCTTTAATGCAACTGGCTATATTTGGCAGACACTAAACTGCTTCTTAACTGCATCATA TTCTCTGACCCTACGAAGAGTCATGGATACAGCAAAGCAAGTTACTAAGTCCGGAAATTTAAATGAGTTTTCGATGGTCT TGTTGAACAACATCCTTTCTTTGCCTTTGGGAATTTTCCTGGTTGTTGTTTTCAATGAGGTGGATTATCTCTTCACAACG CCACTTTTGAGATTGCCTAGCTTTTGGTTGGTGATGACCTTCAGTGGATTTTTGGGACTAGCAATCAGCTTCACATCCAT GTGGTTTCTTCATCAAACAGGGGCTACAACTTACAGTCTCGTAGGTTCGCTGAACAAGATACCACTTTCGGTTGCTGGCA TCCTTCTGTTTAAAGTTCCTACTAGTTTGCAGAATTCTGCTAGCATATTGTTTGGTCTTCTGGCAGGGGTGTTTTTCGCT AGAGCGAAAATCCGGGAGAGATCTCAATCTTGA
Protein sequence (LotjaGi1g1v0319400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKPSINEEHDVEDGKLVKSKTNKIPNQALLAGLAYCLSSCSMILVNKFVLSSYDFNAGISLMVYQNFISVILVTILSLLG LVSTEPLTWRLIKVWFPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITALGEMYLFKKHHDSRVWAALFLMIISAI TGGITDLSFNATGYIWQTLNCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNILSLPLGIFLVVVFNEVDYLFTT PLLRLPSFWLVMTFSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLQNSASILFGLLAGVFFA RAKIRERSQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | - | – | |
| PANTHER | 23 | 328 | 306 | 1.1E-152 | – | |
| PANTHER | 23 | 328 | 306 | 1.1E-152 | – | |
| Phobius | 28 | 50 | 23 | - | – | |
| TMHMM | 28 | 50 | 23 | - | – | |
| Pfam | 29 | 318 | 290 | 8.5E-15 | ||
| Phobius | 51 | 61 | 11 | - | – | |
| TMHMM | 57 | 79 | 23 | - | – | |
| Phobius | 62 | 82 | 21 | - | – | |
| SUPERFAMILY | 71 | 160 | 90 | 4.45E-5 | – | |
| Phobius | 83 | 93 | 11 | - | – | |
| TMHMM | 94 | 116 | 23 | - | – | |
| Phobius | 94 | 113 | 20 | - | – | |
| Phobius | 114 | 118 | 5 | - | – | |
| Phobius | 119 | 140 | 22 | - | – | |
| Phobius | 141 | 146 | 6 | - | – | |
| TMHMM | 147 | 169 | 23 | - | – | |
| Phobius | 147 | 165 | 19 | - | – | |
| Phobius | 166 | 170 | 5 | - | – | |
| Phobius | 171 | 189 | 19 | - | – | |
| TMHMM | 174 | 191 | 18 | - | – | |
| Phobius | 190 | 209 | 20 | - | – | |
| Phobius | 210 | 229 | 20 | - | – | |
| TMHMM | 212 | 234 | 23 | - | – | |
| Phobius | 230 | 248 | 19 | - | – | |
| TMHMM | 249 | 271 | 23 | - | – | |
| Phobius | 249 | 270 | 22 | - | – | |
| Phobius | 271 | 276 | 6 | - | – | |
| Phobius | 277 | 297 | 21 | - | – | |
| TMHMM | 278 | 297 | 20 | - | – | |
| Phobius | 298 | 302 | 5 | - | – | |
| TMHMM | 301 | 320 | 20 | - | – | |
| Phobius | 303 | 320 | 18 | - | – | |
| Phobius | 321 | 330 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0319400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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