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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0327500 |
| Transcript ID | LotjaGi1g1v0327500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF668 family protein; TAIR: AT1G34320.1 Ikzf5 (DUF668); Swiss-Prot: sp|Q827Q7|CARB_STRAW Carbamoyl-phosphate synthase large chain; TrEMBL-Plants: tr|A0A072V1T0|A0A072V1T0_MEDTR DUF668 family protein; Found in the gene: LotjaGi1g1v0327500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:78184089..78191855) extracted from Lotus japonicus Gifu genome v1.2.
CCGGTCTCTGTATTCTTCGTCTTCCTTCTTCCGTTTCTTCAGAAACTTTGTCCAAACCAAAACCCTTCTTCTTTCTTTCA CCATCTTCACACTTCACCATTTTTTCACTGTTATTGATTGCATCCAATGAAAGCTAGCACTCATGGCAACTGCTTCCAAT TCAAAGATTGAGTTCCTCGTCTGGTTGTCTCAAATCATGGGCGGTCTCTGCTCCCGCTCCGCCACCGTTGACCGCGTCTT CGCCACCACCACCACCACCACCGATGCCGCCGCCACCGCTTCTCCTTCCAACAAAACCACCACCACCGCTGATTTCACCA CTCCGCCTCAACCACGCGAAACCATGGACCGAAACCTTCCAGAACCTTCCGATTTCTACGACGGAATCCCTCGTTTCCCC GATAAACCTAGGGCTAGAGCATCCAAGGTCATTTCAACTTTCAACTCAAACCAAACCAAACCAAACCGAACCAAAACCAG TTCTCTCTATTGATCAATCAATGGAATGAAGCTGAAGCTGAACCTGAAGATTTCTGTTTCTGTTTTCAGGTTTCGGAGGT GAGTTCGCGGCTAGGAAGAGTTGGATTGGAGGTTTTGGACACTCTAGGCAGCAGCGTTACCAATCTGAACTCCGGCGGTG GATTCGTTTCTGGTGCTGCTATCAAGGGGAATGAGGTTGCCATCTTAGCGTTTGAAGTTGCCAACACCCTCGTCAAAGGT TTTCATCTCGTGCAATCTCTCTCGCCTCAAAATATCAGGCATTTGAATGAGGACGTGCTTCTTTCAAAGTCTGTGCAGGA TTTGGTGTCCAAGGATAGGGATGAGCTTCTTAGCATTGTAGCTGCTGATAAGAGGTGAGTGAGTGAATCAGTGTTGGATT GTATTACTCAAATTAAGTGCGTGTTTTGTTCGGCGTTGGTTCAAATGCAAACATGATTTCCTGTATCTCGAGGTATTAAC GGAGAAGCTAGAATTTGCTAGGTTGTAGAGTTCAACGGAAATTCAAACACCGCCGAATATTTGTTGCTTTGGTATTTGTT TTTTATCACCGTCGACTTTGTGTGTATGTAAATGAGCTTTGGGGTTTTGTTGTCAGACAGGAGTTGAAAGTTTTTTCTGA TGAGGTGATTCGATTTGGGAATCGTTCGAAGGATCCTCAGTGGCATAACTTGGAACGTTACTTTGAGAAGTAATATAAAT TGTACTCACTCAATTCGTCTAGCTTTTTGGTTCATTTTCAAATATATTTAGCCCTTCACACATTGGTTCTTAATTTTTTT ACCTGTCCTTTTTTCTAGGATTAGCAAGGAATCAAATGCTCAGAGACTATCAAGAGATGAGGCAGAATCAATCATGCAGC AGTTGATGAACCTGGTTCAATATACAGCTGTGAGTATCACTAAAGGAAATACTTACTTATTAGTGTTGCCAGAAGACTGA ATAGTTACTTTGAAGCTGAAAATATTAGGAAGTTAAGGGAAAAAATGGGTTCCTGGTAAGAAGTATTTGTAATACAGAAA CAATGAACTCAAGTGGTTAATTAAGTTTATGAATGACTACTCATTAACTGAAACCACTCTTTATTGTTAACAGGTGCAGT GAGTAATTCCTAAATAAGAAGTATTTCCAATAATTCATTTTTTATAATTATCCGAACAATTTGTTATAGCAGAAGTTGAT TGGAGGATTTTGAATTACTTACCTTATATTATTGGATTGCATTATTTACATATCATTCATAGTTATCGATAGTGCGATAG CGGCGCTATAGCGTCGTCTCGTAGTGTAGCGGATCCCTTCCGTGACGGGATCACGGCTGTGAAATCCCGCTATTCGCGGC CAATAGCGGCTTTCCCTTGTATGGGATTTCGTTTTTGGGGGTCATCCGCGACAGACCGCGATCCGCAATTGACTACTATG AATTATCATTTGAAACAAGAGTTTTATTTCTCTTCATTGTTTTCTCTATATCTTACATGACACCTTTTATTTATATCGTG ATTTATGCTCAGAGATAAATGGGGAATTTCTGAATTCAACCACTAGCACTATAGTAATCTGTGGGTACAATTTATTTTGA TATAATTACCCAAGAAGAAATTTGTAACCATAGAAACCTGAAAGAATGTGTCCACATTTCATAATGTTTGGCGTGCTTTC TTCTTGATTTGATTCTGTCGCTATTGATTTGTTTGCAGAAATCACTTGTTAAAGGAATGGAGAGTCATAAATAATACTGG AAAATTTATGTATTTATAAATTGATAGTTTTAATAAATAACCTGAGATTAAAAATTCTATTTATTGCACCTTTTGTTGCA TCTGCTCATCTGTACTTGCTCTCATTTTGGAGTTAATTTATCTTCAAGCTTTTCCATTATCTTTCCTTAGTTGCACCCAT GTCCTTTGTTAAGCCTTAGTCTACAGTGAGTTCCACTATTCCATGCATTTGCTTTTCAAGTTTTCATTCAACATATAATT TTTTTATGTAGGATTTCTTTCTAAAAGAAATTGGAAAATAAATTTTCTGTGGCTGCAGGAATTGTACCATGAACTTCATG CTTTAGATAGATTTCAACAAGATATCCAGCGTAAGAGTGAAGAGGAGGATAACAAAGGTAGTTATGAATACTGGCAATTA GCCATGATGTAATATGCAACTCTAGACTTTTGTTTGCGACTAGCAATTTTTAACCAAAAATCCAGAGATCTTACAGAAAA AAAATCATATTGAGGGTTAATTTTACTATTGATTTTTCTTTCAATAGAGTGATCATTTAGACGATGATTGATAAATGTGT CGAACTTGACGACAAGGCTCACATTGATCATGTGATTTGTTCTGAAATATTGAAAATGATGTAAACTACCATTTACTACT CTGTCATCATGGACTCTGAAATGGATAGAGGAGCTAGAATATAGATATCTTTATAGTTTGTTCTGCTTCATCTGTATCCT ATTTTGTTATCATATTCTCAATGCCTTCTCAAGCTATCACCGGGTCTTATTGAAATCATTCCTATTAAATTGTTACAGTT TATGTACTGTCAGATCACAGTTCCCAAAGACTAACTTATGGTTTGCACTGATATCTGTTTTAATCTTTTTGGAGCCATAA CTACATATTATTGTTGTGGATGTAATTCTGAAGGCTTGCTTACTTTATTACAGTTCAGTAAAAACTGTCACTTCTAGCCA GAAGTTTGACCTTGCAATGTATTGAGCAGTACTTATTTGTGTGGTATCTTATAGATATACACTTGACTTGAGTATCTCTC TTCCTCATAGGTGATGACCTTGCATTCTTGAGGGCTGAAGTTAAAAGTCAAAAGAAGCAAATTAAACATTTAAAGAAAAA ATCACTCTGGTCTAGAAGTTTGGAGGAGGTAACTTCAGACCACTTCTTGACATGTTTATCTCATCTCCCTCCTCCCCATT ATTTGTAATCCTGTTAGACTGCCATTGTGTCTGATCCATGTATAATGCCAAAGATATATAGAATTAATTTTTATTTATAG AGGTGGGTTTGTCTTGTGCATTTTATAAATTTAGAACGTTGAAAAGTCAAATATAATTCATATTGTAATGATTACAGGTT GTAGAGAAGCTTGTAGATATTGTCCATTTTTTACATTTGGAGATAAGCAATGCCTTTGGAAGTGAAGGTACGTATCCACT AAAGGCTAGATCATGTTTGGATCACTTGATAATTTCTGCTGTCCTAGTGTCACTATATATGATAACTAATCATCAGTTCG TATCAGTGTGATGACTTAATTAGCATTATTGATATCACTGTTAAAATCTCAGCCATGTTAGCCTTATTTTGTTGTCAAAA ATTAATTTCAAAGGGAGATTGTTTGTGCGTGTATTAATTTTTTCTTGAGGTGGGGGGGGGGGGGGCACAAGAGTTTTTAT TCTCAGTAAATCACTGTTGAATCAGTTTGTATGGATAGATGTATTTTGCTTCATACCTGTAATGTTTTTTTATGGGTAAC TGCAGATGGCTACAAACCAATAATTGGACACATGAGCAATCGCCAAAGACTAGGTCCTGCTGGCCTTGCTTTGCATTATG CAAATATAGTGCTTCAAATTGATACTCTTGTAAGTTAATCTTCTTTATTGCATCTACTTCATTCCATGTTCTGTTCTTTT TTGTATCTTACGTTTTCTCAGATAAAAATATAATTGAGTTTCTAGAATTGCTTTTTTATGAGTACTATTCTTCTGTGGTT GGTACCTGCCTACTTCTATGTTATATTCCTTCAATTAGTGTCAGATTTCATGTTATTGGGTTAATCTATAAAATTAATGT TTTTAATCATAACCCTTTCGTGATGAGTCAGTTCTGCAGCAAGGCTAGGCATTTAACTTGTATAAATTTGGTTTACACTG ACATAACATTGTGCAATTTCTATAGAAAATGACATGTGCTTTCAAGTTTCTACCACTAGTTGCCTCAGGTTGCTCCCTGG CCATTAAAGTGTTTGTTTTTAGTGAAAATTGGATGATCCTATAAAAATATAACATTTTGTGATGGAAGCTTCTCTCCATT CTGTATTGTTGACAGTGGACCCACTAAGGGGTTCAGTTTCTTAAGGTGATATTTTGTAAATGTTAATAAGATAAGATTAG AGGATAAATTGTTGATATTTCTTTTTTGAAGCTTTGATCCTGCTAGATAGCTGTTGTAGGGCTACATGAAAGTTGTTATG ATTTTGAAAGGCTTATGTGCTTGAGAAATGTTGATGTAATCTGGTAATATTTGTCACACACTGCAATTAAAGGAAAGAAA AGCCTGGCATTTTCCTTTTTTTGTGTTTCTATCTAGAGATCCAAAAATCTAAGTCATAAGGTAGCTCATACCTGGAATAA TATCAAATTTTCATGTGGATTTTGGTTGAAACCATTTCTTTCTTATGGTTGAGCTTCAAATATGTCAAATCATCAAACAG TGTGTCTTATATGTTTTTGTGTTTGATTGAGTTGTTCTGCTTCATGTTCTCATGCCACATTCTCATTACTGCATATAATA GCCCAACCCTTGTGTAATGAACCTAAGTTCTGATAAAATAGTTTTGGTAGAAATATACATGCACCAGGGAAATTAAATAC ACTAATGCTTGATGCATTCGTGATCTGTTATTCACCAAGCATGGTACTATATGTTATCTCTTGATTATGCTCAACCTGCA TTAGGAACTGAGCATGTCATTAATGGATCGAAAAGCACTCTGTTGTCGGCAGGCCTATGTTTATTAATTTTTTTTTCATA CTTAATTTGGTACAGACAGTTGCTTACAACTAACATTTTAGGGAACTAGACATTTGTATATTCAGTTGAGGACTCTTATG CTCTACTCGAGTTGTATATTTGTGCTTGACTGCATGATAATTGGGATATTATTTGTTTCTTGTTTATTCCGAGTATTTTC CTGGATTGCATAAGGTGTAGTTATACTTATCATAGTTGTATTCAAATTTATGTCTGCTAAAGCATTTAATAGCATTTTAC TGATTCCATTTTGACACTTTTTAGGTAGCCAGATCTAGTGCTATGCCTTCGAATTTAAGGGATACATTATATCAAAGCTT GCCTCCTAATATAAAATCAGCTCTACGTTCCAAATTACCATCCTTTCGTGTTGTAGAAGAGGTATATGATTATCTGCTAA TATTTTCTGTTATTACTGCTTTGTTAAAAATAATCAAACAGAAAAAATAAGGGTCTGGAAAGTTTAGAAATGAGATAGAA AGGTTTTAGGTCGAAGCACACTTTGCCTATAGCCTGCAATTGACGAGGGAAGAATATAACTATTGTATAGTTGTTAATCA ATAGCTCCTTAACTAACCTCCTAGTTAACATCAATTAGTCACCCATCAAAATCAGTCCTCCCAGCTAACATCAATTTGTC ACCCATCATTATCAATCCTCAATCAAGGCCCTGGATGTTGGTTAGCAATACTTTCTCTGTTAGGGAAGGAGAAAACCCTA ACAGTCAATCCAATTAAAACACGGTCAAAAGTGCAATTTCTGAATGAAATACTGATAGACTACCAAAATAAAAGATAGAC TCTTAAACTTAAAGATAAAAATTAAGGAAACCTTATGAACTAAACTCAGACCTAATATTTAGAACCCTAATATTCTCACC CGAAAACTTGCCGTCATACTCCCTAGGTTGTTAAAGTATGTTCATGCATCATACCTGGTTAGAATGTTGGTGAAATGGTT AACCAATTTCTTTTTAAAAAAATAATTCCACATGCAACCATAAAATAAAAAATCTTTAATTATTATTATTTTCTTGGTTT TTTGTTTTTCTCTCATGGTTGCTGTCTGAGTTCTGCAGCTAACTGTAGCAGATATCAAAGAAGAGATGGAGAAAACATTA CAATGGTTGGTTCCCATTGCCACAAACACATCCAAGTAAGATGTTACTTTTTATCAACTAGCTCCTCACTAGCCATGTGT AAAGCTTTCTTTAATCATCAGTCTTTTTACTTTATATGGAATCTTACCCTAATTCTTTTTGGCCTTCTCTTTTGGTTTTT CTAAAATTGATTCAGAGCACATCATGGTTTTGGTTGGGTCGGGGAGTGGGCAAACACAGGGTAAGTATCAAGTCTTCACT GCTTCTAATTTTCTACTTCTTATTCTCTGTAGTTTCAATCCTTTCTGATTTTAAATATTTGCTTGTTTCTTAAAGCTCTG AAGCGAATAGGAAGGCTGTCCAGACTGGTATCATGCGGATCGAGACATTCCATCATGCAGATAAAGGCAAAGTAGAATAC TATATTGTGGACCTTCTGTTATGGCTTCAACGTTTGGCCATTAAAATAAAAGCTGGCAGCGATGCTGGTAAAGTGAAGTC TCCTATGAAATCTTCTGCTGGCACTACCTCGGAAAAGACGAACAAGGAGTCTACAAATGCCCTATCACCAATATTAACAA TTGATGAGCAAACCATGCTGCAGGATGTAAGTAAGAAAGCACTAATTAAAGGGATCAGTAAAAGCATGGACTTTGACAGT CTCAGGAGTAGGTTGAGGGAGAACTACAGACTCACCAAGAGTTGGAGTCTTTCATCAACTAAAAGCAAGGAACTCTCTTT TAATAGGATTTTGTCTAAGCTTCCTGTGATTGATTTTGACATCGACAAAGAAAGAGCATTGAATGTGATAGACAGACTAG ATGTGGTAAGATAATTCGCGAGCTCTTCTGATTGCCTTTGGAACGAGTAGGAGGAGGTTACAATCCATGTGATATAAGTG TGATGCATACTCCATCTTCTGCTTCAAGTGGTGAACGCCATATTTTTTGCAGCATGGTCACCATGGACAGCGTCAGCTTC GTCTGTGCTTTGTTTTGGTGAAGTTTCTCGATGATGTAGGTCATTGTTGAGAGGCATTCATGCTTTGTATCCATGTGACT GCAGTGCCCACTTTGCATTGGAGCATGGAGGACTGTGGTTCATTCGTCATTGTATATACTAAATGAGTTACTCAGAGTAT AGCGCCTGTTGTTCTACACAGCTTTTATTTTTGTGGGTTTGATTACCCATTCACACTGAATCTAAACTTTTTTCATGAAA AAAATGTGATCTCATTTTTTATTTGTCACTTATTGTACTCTTACATTGTATCCCTTCTTAAAATTCGTCCTCAATTGTTT AAACTAATAAATATTAGTGTTTTCGTCCTCTATTTTTATGCAGACTCTTGTGCATAAAAATATTTGCTCAAGCTTTGTGG TACATCT
CDS sequence (LotjaGi1g1v0327500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACTGCTTCCAATTCAAAGATTGAGTTCCTCGTCTGGTTGTCTCAAATCATGGGCGGTCTCTGCTCCCGCTCCGC CACCGTTGACCGCGTCTTCGCCACCACCACCACCACCACCGATGCCGCCGCCACCGCTTCTCCTTCCAACAAAACCACCA CCACCGCTGATTTCACCACTCCGCCTCAACCACGCGAAACCATGGACCGAAACCTTCCAGAACCTTCCGATTTCTACGAC GGAATCCCTCGTTTCCCCGATAAACCTAGGGCTAGAGCATCCAAGGTTTCGGAGGTGAGTTCGCGGCTAGGAAGAGTTGG ATTGGAGGTTTTGGACACTCTAGGCAGCAGCGTTACCAATCTGAACTCCGGCGGTGGATTCGTTTCTGGTGCTGCTATCA AGGGGAATGAGGTTGCCATCTTAGCGTTTGAAGTTGCCAACACCCTCGTCAAAGGTTTTCATCTCGTGCAATCTCTCTCG CCTCAAAATATCAGGCATTTGAATGAGGACGTGCTTCTTTCAAAGTCTGTGCAGGATTTGGTGTCCAAGGATAGGGATGA GCTTCTTAGCATTGTAGCTGCTGATAAGAGACAGGAGTTGAAAGTTTTTTCTGATGAGGTGATTCGATTTGGGAATCGTT CGAAGGATCCTCAGTGGCATAACTTGGAACGTTACTTTGAGAAGATTAGCAAGGAATCAAATGCTCAGAGACTATCAAGA GATGAGGCAGAATCAATCATGCAGCAGTTGATGAACCTGGTTCAATATACAGCTGAATTGTACCATGAACTTCATGCTTT AGATAGATTTCAACAAGATATCCAGCGTAAGAGTGAAGAGGAGGATAACAAAGGTGATGACCTTGCATTCTTGAGGGCTG AAGTTAAAAGTCAAAAGAAGCAAATTAAACATTTAAAGAAAAAATCACTCTGGTCTAGAAGTTTGGAGGAGGTTGTAGAG AAGCTTGTAGATATTGTCCATTTTTTACATTTGGAGATAAGCAATGCCTTTGGAAGTGAAGATGGCTACAAACCAATAAT TGGACACATGAGCAATCGCCAAAGACTAGGTCCTGCTGGCCTTGCTTTGCATTATGCAAATATAGTGCTTCAAATTGATA CTCTTGTAGCCAGATCTAGTGCTATGCCTTCGAATTTAAGGGATACATTATATCAAAGCTTGCCTCCTAATATAAAATCA GCTCTACGTTCCAAATTACCATCCTTTCGTGTTGTAGAAGAGCTAACTGTAGCAGATATCAAAGAAGAGATGGAGAAAAC ATTACAATGGTTGGTTCCCATTGCCACAAACACATCCAAAGCACATCATGGTTTTGGTTGGGTCGGGGAGTGGGCAAACA CAGGCTCTGAAGCGAATAGGAAGGCTGTCCAGACTGGTATCATGCGGATCGAGACATTCCATCATGCAGATAAAGGCAAA GTAGAATACTATATTGTGGACCTTCTGTTATGGCTTCAACGTTTGGCCATTAAAATAAAAGCTGGCAGCGATGCTGGTAA AGTGAAGTCTCCTATGAAATCTTCTGCTGGCACTACCTCGGAAAAGACGAACAAGGAGTCTACAAATGCCCTATCACCAA TATTAACAATTGATGAGCAAACCATGCTGCAGGATGTAAGTAAGAAAGCACTAATTAAAGGGATCAGTAAAAGCATGGAC TTTGACAGTCTCAGGAGTAGGTTGAGGGAGAACTACAGACTCACCAAGAGTTGGAGTCTTTCATCAACTAAAAGCAAGGA ACTCTCTTTTAATAGGATTTTGTCTAAGCTTCCTGTGATTGATTTTGACATCGACAAAGAAAGAGCATTGAATGTGATAG ACAGACTAGATGTGGTAAGATAA
Protein sequence (LotjaGi1g1v0327500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATASNSKIEFLVWLSQIMGGLCSRSATVDRVFATTTTTTDAAATASPSNKTTTTADFTTPPQPRETMDRNLPEPSDFYD GIPRFPDKPRARASKVSEVSSRLGRVGLEVLDTLGSSVTNLNSGGGFVSGAAIKGNEVAILAFEVANTLVKGFHLVQSLS PQNIRHLNEDVLLSKSVQDLVSKDRDELLSIVAADKRQELKVFSDEVIRFGNRSKDPQWHNLERYFEKISKESNAQRLSR DEAESIMQQLMNLVQYTAELYHELHALDRFQQDIQRKSEEEDNKGDDLAFLRAEVKSQKKQIKHLKKKSLWSRSLEEVVE KLVDIVHFLHLEISNAFGSEDGYKPIIGHMSNRQRLGPAGLALHYANIVLQIDTLVARSSAMPSNLRDTLYQSLPPNIKS ALRSKLPSFRVVEELTVADIKEEMEKTLQWLVPIATNTSKAHHGFGWVGEWANTGSEANRKAVQTGIMRIETFHHADKGK VEYYIVDLLLWLQRLAIKIKAGSDAGKVKSPMKSSAGTTSEKTNKESTNALSPILTIDEQTMLQDVSKKALIKGISKSMD FDSLRSRLRENYRLTKSWSLSSTKSKELSFNRILSKLPVIDFDIDKERALNVIDRLDVVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 620 | 611 | 0.0 | – | |
| PANTHER | 10 | 620 | 611 | 0.0 | – | |
| MobiDBLite | 40 | 66 | 27 | - | – | |
| MobiDBLite | 40 | 77 | 38 | - | – | |
| Pfam | 140 | 196 | 57 | 8.8E-21 | ||
| Coils | 288 | 308 | 21 | - | – | |
| Pfam | 355 | 439 | 85 | 2.2E-32 | ||
| MobiDBLite | 506 | 527 | 22 | - | – | |
| MobiDBLite | 512 | 527 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0327500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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