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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0341900 |
| Transcript ID | LotjaGi1g1v0341900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutathione s-transferase, putative; TAIR: AT2G29420.1 glutathione S-transferase tau 7; Swiss-Prot: sp|Q9FQA3|GST23_MAIZE Glutathione transferase GST 23; TrEMBL-Plants: tr|A0A151T9Z0|A0A151T9Z0_CAJCA Putative glutathione S-transferase; Found in the gene: LotjaGi1g1v0341900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:80422743..80424286) extracted from Lotus japonicus Gifu genome v1.2.
ATGACGCTTAGGAAAAGGAAAAAAAAAATACACATTATTTTAGCCATTGACCAGTTTGAACTGGATGACTTGCTGTCTTG GTCACTGACCAGTTTATACATAGAGGACCTGAGAGTGAGAAAGAGCTTCAAGAATTTGATTACAAAGCAAAAATGTCAGG GGATTCAGTCACCTTAATAGGGTTCTGGGGTAGTCCATTTGTCTTCAGTGTCAAGTGGGCTCTTGAACTAAAAGGGGTGA AATACCAATATGTGGAAGAAGATCTCAGCAACAAAAGTGCCATGCTCCTACAGTGTAATCCTGTTTACAAGCAGGTACCA GTTCTGGTGCATGATGGTAAGCCCCTGGCAGAATCACAAGTGATTCTTGAGTATATTGATGAGACCTGGAAGCAAAATCC TCTTCTTCCACATGATCCCTATGAAAGAGCCAAGGCCAGATTCTGGTCCAAATTCACTCAAGAAAAGGTAATGAAGTGTA TTGGTATCATATGCACCACTTTTTTTTATCATCTATGTGATGTGAGAGGCGAGTCTCAGCACAATAGTAAGGTAGTTGTT GCTAAGTGATTTTGTCGTCACTAATTTAGGCCGTAAAATCAGTCTCTTACAAAAATGTAAGGTAAAATTATCTAAATTAG ATCAACAAAGTGGGTCTGTCCCCTTTCTAGAACTCGCGCATAGCGGGAGCTTTATAACACCAAAGTTCCCTTTAGTATAT TCTGTATTTAAAATCTAATACAAAAAACCAACTTCTTATTTTCAGTGTGAACCAGTACTTAAAGCAACCTTTCTCAAAGC AGGGGAGGAACAACAAAAGGCAGTACAAGAAGTTAGAGAGAATCTAAAGACCCTTGAAGGTGGACTTGAGGGAAAACGCT ACTTTGGAGGTGAGGGAATAGGCTTTACTGATATTGCTATTGGGTGGCTTGGATATTGGGTTCGAATAGTGGAGGAGATT GTGGGTATAAGCCTAGTTGATACAGAATCGATGGCTAAGCTTAATGCTTGGTTCGATGATTTTCTTGAGCTTCCTATTAT CAAAGAATCCATGCCAAATCGTGATAAACTGCTTCAGTACATCAAGACCTTCCACAATGCGTTGACGCCCCCATCCACCT GAAAGACTTTTGAGATACTCATTGGCATCTGTGTAAACAGAAGTTAATACTTACTTTTGACATGAATTGGATGATAATTT TCTTGTCTTAGTAACGTGCATCCTTGGCAATGCCTAGTATAATGATAAGGTTGAAAAACCAAAATTTTCAGTAATAAAGT AAACACTTCGCAGTTTGCTCTTTATAGTATGTTTGCACTCACTTTCAAATTAAGTAATTAACTAGAATCACTTCAAAATG AAAGTGCAACACATAGCTTTTGCACTTAACGGATTAACGTGCTTTGGATTCTATATGCATTGTGAATCTATAACATACTG AGTGCATGTTTATATAGTAAAACTAAAATCATGGTGGATAATTACAAAAATTAAGGAAAGTTACTTATGAGCGTTGTGAT TTTAATTTCACCATAATACGCTTT
CDS sequence (LotjaGi1g1v0341900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGGGGATTCAGTCACCTTAATAGGGTTCTGGGGTAGTCCATTTGTCTTCAGTGTCAAGTGGGCTCTTGAACTAAA AGGGGTGAAATACCAATATGTGGAAGAAGATCTCAGCAACAAAAGTGCCATGCTCCTACAGTGTAATCCTGTTTACAAGC AGGTACCAGTTCTGGTGCATGATGGTAAGCCCCTGGCAGAATCACAAGTGATTCTTGAGTATATTGATGAGACCTGGAAG CAAAATCCTCTTCTTCCACATGATCCCTATGAAAGAGCCAAGGCCAGATTCTGGTCCAAATTCACTCAAGAAAAGTGTGA ACCAGTACTTAAAGCAACCTTTCTCAAAGCAGGGGAGGAACAACAAAAGGCAGTACAAGAAGTTAGAGAGAATCTAAAGA CCCTTGAAGGTGGACTTGAGGGAAAACGCTACTTTGGAGGTGAGGGAATAGGCTTTACTGATATTGCTATTGGGTGGCTT GGATATTGGGTTCGAATAGTGGAGGAGATTGTGGGTATAAGCCTAGTTGATACAGAATCGATGGCTAAGCTTAATGCTTG GTTCGATGATTTTCTTGAGCTTCCTATTATCAAAGAATCCATGCCAAATCGTGATAAACTGCTTCAGTACATCAAGACCT TCCACAATGCGTTGACGCCCCCATCCACCTGA
Protein sequence (LotjaGi1g1v0341900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGDSVTLIGFWGSPFVFSVKWALELKGVKYQYVEEDLSNKSAMLLQCNPVYKQVPVLVHDGKPLAESQVILEYIDETWK QNPLLPHDPYERAKARFWSKFTQEKCEPVLKATFLKAGEEQQKAVQEVRENLKTLEGGLEGKRYFGGEGIGFTDIAIGWL GYWVRIVEEIVGISLVDTESMAKLNAWFDDFLELPIIKESMPNRDKLLQYIKTFHNALTPPST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 84 | 84 | 1.1E-37 | ||
| SFLD | 3 | 218 | 216 | 0.0 | – | |
| SFLD | 3 | 218 | 216 | 0.0 | – | |
| ProSiteProfiles | 4 | 83 | 80 | 22.954 | ||
| Pfam | 5 | 77 | 73 | 3.3E-19 | ||
| SUPERFAMILY | 5 | 105 | 101 | 2.52E-27 | ||
| CDD | 6 | 79 | 74 | 2.21894E-40 | – | |
| PANTHER | 7 | 220 | 214 | 4.9E-101 | – | |
| PANTHER | 7 | 220 | 214 | 4.9E-101 | – | |
| SUPERFAMILY | 77 | 216 | 140 | 7.37E-40 | ||
| Gene3D | 85 | 222 | 138 | 4.3E-47 | – | |
| ProSiteProfiles | 88 | 214 | 127 | 16.629 | ||
| CDD | 89 | 214 | 126 | 2.03477E-53 | – | |
| Pfam | 119 | 195 | 77 | 1.8E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0341900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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