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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • SSF47616
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 162 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 0.046s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0062649.1
n.a. PREDICTED: elongation factor 1-delta 2-like isoform X1 [Cicer arietinum] gi|502148510|ref|XP_004507191.1| chr0 21088619 21090888 -
2 domain predictions
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Lj0g3v0062649.2
n.a. PREDICTED: elongation factor 1-delta 2-like isoform X1 [Cicer arietinum] gi|502148510|ref|XP_004507191.1| chr0 21089469 21090888 -
2 domain predictions
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Lj0g3v0064389.1
n.a. Glutathione S-transferase [Medicago truncatula] gi|357516231|ref|XP_003628404.1| chr0 22196532 22198376 -
2 domain predictions
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Lj0g3v0106649.1
n.a. PREDICTED: glutathione S-transferase TCHQD-like [Cicer arietinum] gi|502136048|ref|XP_004502542.1| chr0 45872982 45875725 +
2 domain predictions
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Lj0g3v0120439.1
n.a. glutathione S-transferase GST 12 [Glycine max] gi|351727779|ref|NP_001238708.1| chr0 53501819 53504091 -
2 domain predictions
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Lj0g3v0216189.1
n.a. Glutathione S-transferase [Medicago truncatula] gi|357516545|ref|XP_003628561.1| chr0 109772207 109773150 +
2 domain predictions
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Lj0g3v0274629.1
n.a. PREDICTED: probable glutathione S-transferase-like [Glycine max] gi|356520953|ref|XP_003529124.1| chr0 142409684 142412414 -
2 domain predictions
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Lj0g3v0276859.1
n.a. PREDICTED: glutathione S-transferase F11-like [Cicer arietinum] gi|502137489|ref|XP_004503099.1| chr0 143705223 143707986 +
2 domain predictions
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Lj0g3v0281619.1
n.a. Prostaglandin E synthase [Medicago truncatula] gi|357499069|ref|XP_003619823.1| chr0 146005006 146010251 +
2 domain predictions
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Lj0g3v0288329.1
n.a. PREDICTED: probable glutathione S-transferase-like [Glycine max] gi|356504338|ref|XP_003520953.1| chr0 149840060 149841685 -
2 domain predictions
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Lj0g3v0288349.1
n.a. tau class glutathione S-transferase [Glycine soja] gi|406716690|gb|AFS51729.1| chr0 149843919 149845929 -
2 domain predictions
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Lj0g3v0303509.1
n.a. PREDICTED: glutathione S-transferase F9-like [Cicer arietinum] gi|502128459|ref|XP_004499970.1| chr0 157994085 157995108 -
2 domain predictions
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Lj0g3v0325959.1
n.a. PREDICTED: glutathionyl-hydroquinone reductase YqjG-like [Cicer arietinum] gi|502114853|ref|XP_004495065.1| chr0 170361169 170362796 -
2 domain predictions
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Lj0g3v0326719.1
n.a. dehydroascorbate reductase [Lotus japonicus] gi|66732627|gb|AAY52461.1| chr0 170778305 170783227 -
2 domain predictions
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Lj0g3v0326719.2
n.a. dehydroascorbate reductase [Lotus japonicus] gi|66732627|gb|AAY52461.1| chr0 170778931 170783227 -
2 domain predictions
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Lj0g3v0331239.1
n.a. glutathione S-transferase [Caragana korshinskii] gi|294992077|gb|ABG90381.2| chr0 173126485 173128925 +
2 domain predictions
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Lj0g3v0331259.1
n.a. PREDICTED: probable glutathione S-transferase parA-like [Cicer arietinum] gi|502088031|ref|XP_004488708.1| chr0 173132216 173133253 +
2 domain predictions
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Lj0g3v0331269.1
n.a. n.a. chr0 173133727 173135054 +
2 domain predictions
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Lj0g3v0331279.1
n.a. glutathione S-transferase GST 16 [Glycine max] gi|351727831|ref|NP_001237686.1| chr0 173134014 173135054 -
2 domain predictions
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Lj0g3v0351679.1
n.a. glutathione S-transferase GST 16 [Glycine max] gi|351727831|ref|NP_001237686.1| chr0 184919160 184920203 +
2 domain predictions
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Lj0g3v0352399.1
n.a. glutathione S-transferase GST 22 [Glycine max] gi|358248536|ref|NP_001239642.1| chr0 185334780 185338652 -
2 domain predictions
 –
Lj0g3v0362919.1
n.a. PREDICTED: glutathione S-transferase-like [Glycine max] gi|356502854|ref|XP_003520230.1| chr0 191419336 191420205 +
2 domain predictions
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Lj1g3v1147490.1
n.a. PREDICTED: probable methionyl-tRNA synthetase-like [Glycine max] gi|356516237|ref|XP_003526802.1| chr1 14178675 14190574 -
2 domain predictions
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Lj1g3v1526240.2
n.a. PREDICTED: LOW QUALITY PROTEIN: glutathione transferase GST 23-like [Glycine max] gi|356510141|ref|XP_003523798.1| chr1 18249207 18250622 -
2 domain predictions
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Lj1g3v1526250.1
n.a. PREDICTED: LOW QUALITY PROTEIN: glutathione transferase GST 23-like [Glycine max] gi|356510141|ref|XP_003523798.1| chr1 18256350 18258451 -
2 domain predictions
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Lj1g3v2195290.1
n.a. PREDICTED: prostaglandin E synthase 2-like [Cicer arietinum] gi|502131257|ref|XP_004500926.1| chr1 26320815 26323913 +
2 domain predictions
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Lj1g3v3441360.1
n.a. PREDICTED: probable glutathione S-transferase-like [Glycine max] gi|356520951|ref|XP_003529123.1| chr1 39672615 39677754 -
2 domain predictions
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Lj1g3v3441370.1
n.a. probable glutathione S-transferase [Glycine max] gi|351727399|ref|NP_001238439.1| chr1 39672615 39674148 +
2 domain predictions
 –
Lj1g3v3441370.2
n.a. probable glutathione S-transferase [Glycine max] gi|351727399|ref|NP_001238439.1| chr1 39672615 39677753 +
2 domain predictions
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Lj1g3v3441400.1
n.a. PREDICTED: probable glutathione S-transferase-like [Glycine max] gi|356520951|ref|XP_003529123.1| chr1 39684740 39685988 -
2 domain predictions
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Lj1g3v3441450.1
n.a. Glutathione S-transferase [Medicago truncatula] gi|357505821|ref|XP_003623199.1| chr1 39696669 39699611 -
2 domain predictions
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Lj1g3v3441490.1
n.a. glutathione S-transferase GST 8 [Glycine max] gi|351726820|ref|NP_001238675.1| chr1 39717590 39718936 +
2 domain predictions
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Lj1g3v4578810.1
n.a. PREDICTED: protein IN2-1 homolog B-like [Glycine max] gi|356572385|ref|XP_003554349.1| chr1 54314381 54320342 +
2 domain predictions
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Lj1g3v4578810.2
n.a. PREDICTED: protein IN2-1 homolog B-like [Glycine max] gi|356572385|ref|XP_003554349.1| chr1 54314381 54320342 +
2 domain predictions
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Lj1g3v4578810.3
n.a. PREDICTED: protein IN2-1 homolog B-like [Glycine max] gi|356572385|ref|XP_003554349.1| chr1 54314381 54316999 +
2 domain predictions
 –
Lj1g3v4578810.4
n.a. PREDICTED: protein IN2-1 homolog B-like [Glycine max] gi|356572385|ref|XP_003554349.1| chr1 54317705 54320342 +
2 domain predictions
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Lj2g3v1349470.1
n.a. glutathione S-transferase GST 5 [Glycine max] gi|351725411|ref|NP_001238627.1| chr2 21273264 21276195 -
2 domain predictions
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Lj2g3v2414950.1
n.a. PREDICTED: elongation factor 1-gamma-like [Vitis vinifera] gi|225465198|ref|XP_002264400.1| chr2 34460771 34462288 -
2 domain predictions
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Lj2g3v3319030.1
n.a. Glutathione S-transferase N-terminal domain containing protein [Medicago truncatula] gi|357442717|ref|XP_003591636.1| chr2 42003476 42004029 +
2 domain predictions
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Lj3g3v1009860.1
n.a. glutathione S-transferase GST 9 [Glycine max] gi|351722723|ref|NP_001236486.1| chr3 13353233 13354885 +
2 domain predictions
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Lj4g3v0083870.1
n.a. PREDICTED: glutathione S-transferase zeta class-like isoform X2 [Cicer arietinum] gi|502126545|ref|XP_004499348.1| chr4 668640 672490 -
2 domain predictions
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Lj4g3v0654580.1
n.a. Glutathione S-transferase omega-like protein [Medicago truncatula] gi|357475193|ref|XP_003607882.1| chr4 10652184 10655548 +
2 domain predictions
 –
Lj4g3v0654580.2
n.a. Glutathione S-transferase omega-like protein [Medicago truncatula] gi|357475193|ref|XP_003607882.1| chr4 10652184 10655548 +
2 domain predictions
 –
Lj4g3v0960020.1
n.a. Glutathione S-transferase omega-like protein [Medicago truncatula] gi|357475193|ref|XP_003607882.1| chr4 13961823 13963939 +
2 domain predictions
 –
Lj4g3v2017240.1
n.a. glutathione S-transferase GST 22 [Glycine max] gi|358248536|ref|NP_001239642.1| chr4 27943332 27945877 -
2 domain predictions
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Lj4g3v2122840.1
n.a. PREDICTED: metaxin-2-like [Glycine max] gi|356562123|ref|XP_003549323.1| chr4 29230427 29234259 +
2 domain predictions
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Lj4g3v2225640.1
n.a. PREDICTED: glutathione S-transferase 3-like [Cicer arietinum] gi|502150687|ref|XP_004508074.1| chr4 30831866 30833154 +
2 domain predictions
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Lj4g3v2618240.1
n.a. Glutathione S-transferase GST [Medicago truncatula] gi|357519093|ref|XP_003629835.1| chr4 35564858 35566618 +
2 domain predictions
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Lj4g3v2618250.1
n.a. glutathione S-transferase GST 17 [Glycine max] gi|351722919|ref|NP_001234957.1| chr4 35570963 35572800 +
2 domain predictions
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Lj4g3v2618270.1
n.a. tau class glutathione S-transferase [Glycine soja] gi|330687254|gb|AEC32486.1| chr4 35573539 35579703 +
2 domain predictions
 –