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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0348500 |
| Transcript ID | LotjaGi1g1v0348500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14-3-3-like family protein; TAIR: AT5G10450.1 G-box regulating factor 6; Swiss-Prot: sp|Q96451|1433B_SOYBN 14-3-3-like protein B; TrEMBL-Plants: tr|B7FK19|B7FK19_MEDTR Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0348500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:81727071..81731425) extracted from Lotus japonicus Gifu genome v1.2.
TGTAACAATGAACCAAATTGCCTTACCAAAATGATTTAGATTTTAGAACATAGCGTTTCATGAGGCCCAAAATAAAATGG CCAAGCTTTGAGGGCCAAGTCCAAAATTGAAACTTGACCCAAATTTGACCTAAAGGAAGCAACATGACCCAAATGGAGCA CAAAAGGTCAAAAGACTCTGGTCATGTCATGAGGATGATGATGATAATGGGTGGGTAATGGATGGGCAAGACAGCTCAAT CCTACACTGCAACACATCATCATCATCATATATTTATTAATATTCATTCATCATACATCATTCATTCATTGAATTCATAT ATATCATCAGTTTCGGTGTTCACAGTTCACACACATTCACTCACACTGTAAACAACAACAACAACAACAATCACAATCTC AAATCACACAAACAAAAAACAATGGCTGTTGCTGGTGGGGTCCCGGAAAACCTAAGCAGGGAACAGTATGTCTACCTCGC CAAGCTAGCGGAGCAGGCGGAGCGCTACGAGGAGATGGTGGAGTTCATGCAGAAGCTCGTGGTAGGGTCCACACCCGCGG CGGAGCTCAGCGTGGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTCATCGGCTCCCTCCGTGCGGCGTGGCGG ATCGTCTCGTCGATTGAGCAGAAGGAGGAGAGTCGGAAGAACGACGACCATGTGGTTCTTGTGAAGGATTACAGATCCAA GGTGGAGGTTGAGCTTTCCAACATCTGTGCTAGCATCCTCAACCTTTTGGATTCCAATCTCATCCCTTCTGCTTCTTCCA GTGAATCCAAAGTTTTCTATTACAAGATGAAAGGGGATTATCATAGGTACTTGGCTGAGTTTAGGGTTGGTGATCAGAGA AAAGCTTCTGCTGAAGATACTATGTTGTCTTACAAGGCTGCACAGGTTTGATTTTTTTTTTTTTTTTGATTTGTGTTTCA TGTTTCTGTTTTGATGATTGATTTTTTTGTTTTTTTTTTTGTTTTGGGGTTTTTGTAGGACATTGCTGCTACTGATCTTC CACCTACTCATCCTATAAGATTGGGTTTGGCACTCAATTTCTCTGTGTTCTACTATGAAATTCTCAACCAGTCTGACAAA GCATGTGCCATGGCTAAACAGGTCAGGGTTTAATTTGATTTGTGTTCTTTCTTTTGTGTTGTGTGTGTGTGTGTGTTGCT TTGTTCATGATCAGTTTAGTCCATCTGGGTATATTTGTTTTGGATTAACCTGCCACTGTTTATGTTCTATGAATTGAGTC ATGAATGCTGTATTTGATTACTTGATTTTCTGATTTATGAAATCACACCTTCTTGCTTCCTCATGATCAGTTGGGGCTTA CTAGTATTTGATGGGAGTAGAATTTGACATTTTGACTAATAATTGTTCTGTTTGACTTGGGTATGTGTCTGTGTGTATCT TATGAGAAGATGGGTGAAAAGGGGATTTTTTTGTGAATTTCTCTTGTTTGGCTTGCGGTAGCAATCTGTTTTATCTAAAT TTGGTGAAGTTGTTGAGGATTTACATTTACACATGTGTTATTCTATGCTGACTGCATACTAGGAAAGGGTTGGTCACAAT CACATAGATCATAGTTCTTTCCTATATGTGAACATCATAGTTGAGCTGGATGAATAATGAATTGCATATCAGTTTAACTG CCACCTTTGGCTGCTTGTAGTTTTCACGGGTGAGGGTGAAGTTATTGTTGGGGAACTTTCAGTTTCTACTAAAACTTTGT GTGTTTTGGTGAGAGTTCTCTGACACTGAATGTATCTATTCTGGTATTGAGTTTTGCTCATGGAGGTAGATAAGATTTTG ACTTGAATTGACTAAAAGAGAAAAGTGGAAATTACATGAAGAAGCAAGTTAACAGAATTACTATCACTTTCATTAATAAT TTTTTTAATCAACTGCGATGATTTTATAGTTACCTTATTTCTAACTCTGGTTAGCAAACTGCAAATTTTCTTGTTAGATT GCAACTATTTGTCTTGTTCTCCAAAAAAAATATGAAGAGGATGTTTTGATGATTTTTTTATTATTCACCTCAACAAATTT ATTGTTCTTTTTTATAATTGTAAACTGTTAATTGGTTGTACCAAACTGGAAGTGTTGTTAACTTAAACCTAATTCGATTT TCTTCCCCCAAAGAAAAGGTACACTTCAATTGGTCCATTAGCAATCCATGCTTATCCATATTGACACACATGGTTCCCTG TTTTTCAAGTATTCCATTTCACTTTCTGTTTTATGCTTAGCTTCTAGTGTATGTCTGTTCTGAGTGCTACAGCTGGAACA CAGCCTTATTGATTCTAAAATCTATTAATAACATGTTTGGATCAGTTTCTCTTTAATCAAAATCAATTCTATCATTCAGA AGCTACTCACATAAACTCCTCCCCATAATTGATTTTGGCTTTAGAATCAATTGTGAAGAGATTCTCAAACATCCACTGAA CCATATTGATTTCATTTTTGAAAGGCATTTGAGGAAGCAATTGCTGAGCTGGACACCTTGGGAGAAGAATCCTACAAAGA CAGCACCCTCATCATGCAGCTTTTAAGAGACAACCTGACCCTTTGGACTTCTGATGTCCAGGTAAATGTCACTGTCTAAC TTGAAGCATTTTGATGAATCACTCTTCCTAATGTTGCAATGAATTAAAATCTGAGAATGATGTTCTAATATTTACTTAAC CTATATATTTGGCTTCCTGCAGGACCAGCTAGATGAGCCCTGATATCCCTTATAAGTTGATGTGTGGTATTCTTCCTCTG AAGGAGGTGGGCTTTGAATGTCATTTCTTTTGTGCTGATTAAGAATCACCCTAGTTTATAAATGATTGGCAATTTGTGAT ATAATGTTAATGAGCAGAAAGACTAGACTCTTTTTTATGTGTCATATGATTTGGAAAGGATACTTTATAATCCAGTTAAT TATATATGGTTTAATTTTCCTTTACCTACAATTTTTTTGCAACGATATTATTTATAGCATGTTTGGATCAGCTTCTCATT TGTCATAATCAATCATGAAACACAAAGATTACATCAAAGATCAAGGCTCATACTTGAAGTTGATATGATAGAAATATATT ACTATAGTTGGAGAAATGTTACTTCCATTTCCACAATCACACTACACAGGGTTATAAGTGGCCTGCATTGTTTACACTTT GAGTGCAAGTGGGTCCTGTTTGAAATTTTTGGTCAGCCGCCATTGAAGCATGTGGTCCTCCCCTGGGAGCTGGTTGTAGC AGAGCATTATTCTTGTGGAAGTAACATTTTTCATGATAACTATGATGGCGAATATATCATGCTGACATGGACATCGTATG CTATTATTTTCGAAAGATTCCTAGGAAGTACGCTTGATGATCTGGAGTGTTTATCTAAACCACTTGAAGCAATGTTCAAC GTTTTCTCTACCAATAGTTTCTCCCCCCTGCTAAATGAAAAAAAGGTTGAACGGTCTATATTGGTGTTGATTATTATAAT TACACAAGTTAACAAAACAGGTTCCCTTCCCTCCTTGTGCGGGAGCTTCTTTTTTGTCAAAAGGAGTTGAGAGCAAAGTC CTCGTTGCCCATACATTGATTGGAATAGCAAAAGCTTGCACATACAAAGACATAAAGATAACAGAAAAGTTCAAACAACT AAAACAATATGAACAACCAGTGTATGATCCATTTTTTTCTTGTTGCTCAATGTTTTTTTACGTCTTGTTGGCTTTACATT GTAACTTTGCCTCTGGCCAGAAGAAAGAGCGGCTTTGCAGCAACATACCAGAGACAAACTGAGAATGATAGACACAGTTT TCCCATGGAAAGAACGGGAAAAGTGGTGGAACAAGAAGGATGAAAATGATAAAACAAAAGTGAAAGGCTGAAAGAAGGGC TGGCCGAAAAAAGAGAAGGAAACTAAAGGTGAAAAATCCTACAATGAGAGAGAGAGAGAGAGAGGGAGAGTCGGAAACCC CATGAAGGAAAGGGAACCTCCACAGGGGAGGAGCTCTTTTGATTTCGCTCTTACTTATTAGAGCATCTACATCCATCATA CTCACTAAAATATCTACACTTCATTTTTTACAATTCCTCATAATGTTACATCATCTACACCACTTTACAAACTTTTTACT CCAATCCAACAACTCATAAAAGTTTCTATAATGGATCTCACTATCAACATCACATTTGTATATTTTATTATTTATCTTCA TTTTAATTAATTATATTTGCAACCTAAATTTTAAATAATAAAAAATGAAATAATTGTATTAATTGTAAGTGTTATACAAG CTCACTTTTCAAGTCCAGTGTAGAGTATATATTCC
CDS sequence (LotjaGi1g1v0348500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTTGCTGGTGGGGTCCCGGAAAACCTAAGCAGGGAACAGTATGTCTACCTCGCCAAGCTAGCGGAGCAGGCGGA GCGCTACGAGGAGATGGTGGAGTTCATGCAGAAGCTCGTGGTAGGGTCCACACCCGCGGCGGAGCTCAGCGTGGAGGAGC GCAACCTCCTCTCCGTCGCCTACAAGAACGTCATCGGCTCCCTCCGTGCGGCGTGGCGGATCGTCTCGTCGATTGAGCAG AAGGAGGAGAGTCGGAAGAACGACGACCATGTGGTTCTTGTGAAGGATTACAGATCCAAGGTGGAGGTTGAGCTTTCCAA CATCTGTGCTAGCATCCTCAACCTTTTGGATTCCAATCTCATCCCTTCTGCTTCTTCCAGTGAATCCAAAGTTTTCTATT ACAAGATGAAAGGGGATTATCATAGGTACTTGGCTGAGTTTAGGGTTGGTGATCAGAGAAAAGCTTCTGCTGAAGATACT ATGTTGTCTTACAAGGCTGCACAGGACATTGCTGCTACTGATCTTCCACCTACTCATCCTATAAGATTGGGTTTGGCACT CAATTTCTCTGTGTTCTACTATGAAATTCTCAACCAGTCTGACAAAGCATGTGCCATGGCTAAACAGGCATTTGAGGAAG CAATTGCTGAGCTGGACACCTTGGGAGAAGAATCCTACAAAGACAGCACCCTCATCATGCAGCTTTTAAGAGACAACCTG ACCCTTTGGACTTCTGATGTCCAGGACCAGCTAGATGAGCCCTGA
Protein sequence (LotjaGi1g1v0348500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVAGGVPENLSREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQ KEESRKNDDHVVLVKDYRSKVEVELSNICASILNLLDSNLIPSASSSESKVFYYKMKGDYHRYLAEFRVGDQRKASAEDT MLSYKAAQDIAATDLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNL TLWTSDVQDQLDEP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 6 | 246 | 241 | 1.2E-120 | ||
| PANTHER | 7 | 254 | 248 | 1.1E-153 | – | |
| PANTHER | 7 | 254 | 248 | 1.1E-153 | ||
| PIRSF | 8 | 253 | 246 | 4.2E-111 | ||
| SUPERFAMILY | 12 | 246 | 235 | 2.35E-101 | ||
| SMART | 13 | 253 | 241 | 5.1E-174 | ||
| Pfam | 19 | 244 | 226 | 2.9E-99 | ||
| Coils | 19 | 39 | 21 | - | – | |
| PRINTS | 48 | 77 | 30 | 2.9E-85 | ||
| ProSitePatterns | 54 | 64 | 11 | - | ||
| PRINTS | 97 | 121 | 25 | 2.9E-85 | ||
| PRINTS | 128 | 150 | 23 | 2.9E-85 | ||
| PRINTS | 163 | 189 | 27 | 2.9E-85 | ||
| PRINTS | 190 | 216 | 27 | 2.9E-85 | ||
| PRINTS | 217 | 246 | 30 | 2.9E-85 | ||
| ProSitePatterns | 226 | 245 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0348500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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